RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 NCOA1Q15788 1441 aa9.72□□□□□ -0.85
ATP2C1-208ENST00000504948 U2AF1L5P0DN76 240 aaPredicted RBP9.72□□□□□ -0.85
ATP2C1-208ENST00000504948 U2AF1Q01081 240 aaKnown RBP eCLIP9.72□□□□□ -0.85
ATP2C1-208ENST00000504948 RPRD2Q5VT52 1461 aaKnown RBP9.72□□□□□ -0.85
ATP2C1-208ENST00000504948 CENPJQ9HC77 1338 aaPredicted RBP9.72□□□□□ -0.85
ATP2C1-208ENST00000504948 ANKRD45Q5TZF3 282 aa9.72□□□□□ -0.85
ATP2C1-208ENST00000504948 DHX37Q8IY37 1157 aaKnown RBP9.72□□□□□ -0.85
ATP2C1-208ENST00000504948 DIP2AQ14689 1571 aa9.72□□□□□ -0.85
ATP2C1-208ENST00000504948 PNISRQ8TF01 805 aaKnown RBP9.72□□□□□ -0.85
ATP2C1-208ENST00000504948 DDX11L8A8MPP1 907 aa9.71□□□□□ -0.85
ATP2C1-208ENST00000504948 RWDD1Q9H446 243 aaPredicted RBP9.71□□□□□ -0.85
ATP2C1-208ENST00000504948 RBM25P49756 843 aaKnown RBP9.71□□□□□ -0.86
ATP2C1-208ENST00000504948 SPC24Q8NBT2 197 aa9.71□□□□□ -0.86
ATP2C1-208ENST00000504948 CFDP1Q9UEE9 299 aaPredicted RBP9.71□□□□□ -0.86
ATP2C1-208ENST00000504948 PRPF40AO75400 957 aaKnown RBP9.7□□□□□ -0.86
ATP2C1-208ENST00000504948 RRBP1Q9P2E9 1410 aaKnown RBP9.7□□□□□ -0.86
ATP2C1-208ENST00000504948 ZNF830Q96NB3 372 aaPredicted RBP9.7□□□□□ -0.86
ATP2C1-208ENST00000504948 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.7□□□□□ -0.86
ATP2C1-208ENST00000504948 ADGRB3O60242 1522 aa9.69□□□□□ -0.86
ATP2C1-208ENST00000504948 MYBBP1AQ9BQG0 1328 aaKnown RBP9.69□□□□□ -0.86
ATP2C1-208ENST00000504948 C1orf115Q9H7X2 142 aa9.69□□□□□ -0.86
ATP2C1-208ENST00000504948 DTNBO60941 627 aa9.69□□□□□ -0.86
ATP2C1-208ENST00000504948 ZNF428Q96B54 188 aa9.69□□□□□ -0.86
ATP2C1-208ENST00000504948 TBC1D2Q9BYX2 928 aa9.69□□□□□ -0.86
ATP2C1-208ENST00000504948 ABCC5O15440 1437 aa9.69□□□□□ -0.86
ATP2C1-208ENST00000504948 A2ML1A8K2U0 1454 aa9.68□□□□□ -0.86
ATP2C1-208ENST00000504948 NPM1P06748 294 aaKnown RBP eCLIP9.68□□□□□ -0.86
ATP2C1-208ENST00000504948 PDZRN3Q9UPQ7 1066 aa9.68□□□□□ -0.86
ATP2C1-208ENST00000504948 GOLGA6L4A6NEF3 574 aa9.68□□□□□ -0.86
ATP2C1-208ENST00000504948 CCAR2Q8N163 923 aaKnown RBP9.68□□□□□ -0.86
ATP2C1-208ENST00000504948 NOS1P29475 1434 aa9.68□□□□□ -0.86
ATP2C1-208ENST00000504948 NUTM2DQ5VT03 806 aaPredicted RBP9.68□□□□□ -0.86
ATP2C1-208ENST00000504948 NLRP1Q9C000 1473 aa9.68□□□□□ -0.86
ATP2C1-208ENST00000504948 DAPK1P53355 1430 aa9.67□□□□□ -0.86
ATP2C1-208ENST00000504948 USP47Q96K76 1375 aa9.67□□□□□ -0.86
ATP2C1-208ENST00000504948 WASHC2CQ9Y4E1 1318 aa9.67□□□□□ -0.86
ATP2C1-208ENST00000504948 TULP1O00294 542 aaPredicted RBP9.67□□□□□ -0.86
ATP2C1-208ENST00000504948 RALBP1Q15311 655 aa9.67□□□□□ -0.86
ATP2C1-208ENST00000504948 ROCK1Q13464 1354 aa9.67□□□□□ -0.86
ATP2C1-208ENST00000504948 SETBP1Q9Y6X0 1596 aa9.67□□□□□ -0.86
ATP2C1-208ENST00000504948 ROCK2O75116 1388 aaKnown RBP9.67□□□□□ -0.86
ATP2C1-208ENST00000504948 FGD6Q6ZV73 1430 aa9.66□□□□□ -0.86
ATP2C1-208ENST00000504948 ERVK-7P63135 1459 aa9.66□□□□□ -0.86
ATP2C1-208ENST00000504948 TMF1P82094 1093 aa9.66□□□□□ -0.86
ATP2C1-208ENST00000504948 PPP6R1Q9UPN7 881 aa9.66□□□□□ -0.86
ATP2C1-208ENST00000504948 MAPK8IP3Q9UPT6 1336 aa9.66□□□□□ -0.86
ATP2C1-208ENST00000504948 DHX29Q7Z478 1369 aaKnown RBP9.66□□□□□ -0.86
ATP2C1-208ENST00000504948 KCNJ4P48050 445 aa9.65□□□□□ -0.86
ATP2C1-208ENST00000504948 MORC1Q86VD1 984 aa9.65□□□□□ -0.86
ATP2C1-208ENST00000504948 RBM27Q9P2N5 1060 aaKnown RBP9.65□□□□□ -0.86
ATP2C1-208ENST00000504948 ZNF644Q9H582 1327 aaPredicted RBP9.65□□□□□ -0.86
ATP2C1-208ENST00000504948 TPM2P07951 284 aa9.65□□□□□ -0.86
ATP2C1-208ENST00000504948 PDCL3Q9H2J4 239 aa9.65□□□□□ -0.87
ATP2C1-208ENST00000504948 GDPD2Q9HCC8 539 aa9.65□□□□□ -0.87
ATP2C1-208ENST00000504948 IGHDP01880 384 aa9.64□□□□□ -0.87
ATP2C1-208ENST00000504948 CCDC27Q2M243 656 aa9.64□□□□□ -0.87
ATP2C1-208ENST00000504948 TRIM6-TRIM34B2RNG4 842 aa9.64□□□□□ -0.87
ATP2C1-208ENST00000504948 FOSBP53539 338 aa9.64□□□□□ -0.87
ATP2C1-208ENST00000504948 PAXIP1Q6ZW49 1069 aaPredicted RBP9.64□□□□□ -0.87
ATP2C1-208ENST00000504948 CRYBG1Q9Y4K1 1723 aa9.64□□□□□ -0.87
ATP2C1-208ENST00000504948 SYCE3A1L190 88 aa9.64□□□□□ -0.87
ATP2C1-208ENST00000504948 SLC4A10Q6U841 1118 aa9.64□□□□□ -0.87
ATP2C1-208ENST00000504948 TRPM2O94759 1503 aa9.63□□□□□ -0.87
ATP2C1-208ENST00000504948 PDE3BQ13370 1112 aa9.63□□□□□ -0.87
ATP2C1-208ENST00000504948 ZRSR1Q15695 479 aaKnown RBP9.63□□□□□ -0.87
ATP2C1-208ENST00000504948 IBSPP21815 317 aaPredicted RBP9.63□□□□□ -0.87
ATP2C1-208ENST00000504948 SSFA2P28290 1259 aa9.63□□□□□ -0.87
ATP2C1-208ENST00000504948 CERS3Q8IU89 383 aa9.63□□□□□ -0.87
ATP2C1-208ENST00000504948 C17orf53Q8N3J3 647 aaPredicted RBP9.63□□□□□ -0.87
ATP2C1-208ENST00000504948 PMFBP1Q8TBY8 1022 aa9.63□□□□□ -0.87
ATP2C1-208ENST00000504948 ZNF526Q8TF50 670 aaPredicted RBP9.63□□□□□ -0.87
ATP2C1-208ENST00000504948 TNNQ9UQP3 1299 aa9.63□□□□□ -0.87
ATP2C1-208ENST00000504948 IFT57Q9NWB7 429 aa9.63□□□□□ -0.87
ATP2C1-208ENST00000504948 CLCN1P35523 988 aa9.63□□□□□ -0.87
ATP2C1-208ENST00000504948 GORABQ5T7V8 394 aa9.63□□□□□ -0.87
ATP2C1-208ENST00000504948 FGD1P98174 961 aa9.62□□□□□ -0.87
ATP2C1-208ENST00000504948 CASC1Q6TDU7 716 aa9.62□□□□□ -0.87
ATP2C1-208ENST00000504948 TSR2Q969E8 191 aaKnown RBP9.62□□□□□ -0.87
ATP2C1-208ENST00000504948 RBM42Q9BTD8 480 aaKnown RBP9.62□□□□□ -0.87
ATP2C1-208ENST00000504948 JARID2Q92833 1246 aaPredicted RBP9.62□□□□□ -0.87
ATP2C1-208ENST00000504948 CHAMP1Q96JM3 812 aa9.62□□□□□ -0.87
ATP2C1-208ENST00000504948 NBPF1Q3BBV0 1214 aa9.61□□□□□ -0.87
ATP2C1-208ENST00000504948 ZSCAN30Q86W11 494 aa9.61□□□□□ -0.87
ATP2C1-208ENST00000504948 LARP6Q9BRS8 491 aaKnown RBP9.61□□□□□ -0.87
ATP2C1-208ENST00000504948 RILPL2Q969X0 211 aa9.61□□□□□ -0.87
ATP2C1-208ENST00000504948 CPS1P31327 1500 aa9.61□□□□□ -0.87
ATP2C1-208ENST00000504948 KIAA1210Q9ULL0 1709 aa9.61□□□□□ -0.87
ATP2C1-208ENST00000504948 C8orf34Q49A92 452 aa9.61□□□□□ -0.87
ATP2C1-208ENST00000504948 STK26Q9P289 416 aa9.61□□□□□ -0.87
ATP2C1-208ENST00000504948 CCDC9Q9Y3X0 531 aaKnown RBP9.61□□□□□ -0.87
ATP2C1-208ENST00000504948 KIF1BO60333 1816 aa9.61□□□□□ -0.87
ATP2C1-208ENST00000504948 NHSL1Q5SYE7 1610 aa9.61□□□□□ -0.87
ATP2C1-208ENST00000504948 TRHP20396 242 aaPredicted RBP9.61□□□□□ -0.87
ATP2C1-208ENST00000504948 CFAP53Q96M91 514 aa9.61□□□□□ -0.87
ATP2C1-208ENST00000504948 CLTCL1P53675 1640 aa9.6□□□□□ -0.87
ATP2C1-208ENST00000504948 PPP4R3BQ5MIZ7 849 aa9.6□□□□□ -0.87
ATP2C1-208ENST00000504948 GNL2Q13823 731 aaKnown RBP9.6□□□□□ -0.87
ATP2C1-208ENST00000504948 TNPO1Q92973 898 aaKnown RBP9.6□□□□□ -0.87
ATP2C1-208ENST00000504948 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.6□□□□□ -0.87
ATP2C1-208ENST00000504948 V9GYY5 206 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms