RNA–Protein interactions for RNA: ENST00000504855.1

CCNB3P1-201, Transcript of cyclin B3 pseudogene 1, humanhuman

BASIC

Gene CCNB3P1, Length 1,431 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3P1-201ENST00000504855 LRRC7Q96NW7 1537 aa16.35■□□□□ 0.21
CCNB3P1-201ENST00000504855 XIRP1Q702N8 1843 aaKnown RBP16.35■□□□□ 0.21
CCNB3P1-201ENST00000504855 C19orf44Q9H6X5 657 aa16.34■□□□□ 0.21
CCNB3P1-201ENST00000504855 TMEM94Q12767 1356 aa16.34■□□□□ 0.21
CCNB3P1-201ENST00000504855 KIF1AQ12756 1690 aa16.33■□□□□ 0.21
CCNB3P1-201ENST00000504855 USP6P35125 1406 aa16.33■□□□□ 0.2
CCNB3P1-201ENST00000504855 PPP2R1AP30153 589 aa16.33■□□□□ 0.2
CCNB3P1-201ENST00000504855 ACEP12821 1306 aa16.32■□□□□ 0.2
CCNB3P1-201ENST00000504855 C14orf37Q86TY3 774 aa16.32■□□□□ 0.2
CCNB3P1-201ENST00000504855 MORC1Q86VD1 984 aa16.32■□□□□ 0.2
CCNB3P1-201ENST00000504855 SSH2Q76I76 1423 aa16.32■□□□□ 0.2
CCNB3P1-201ENST00000504855 FYB1O15117 783 aa16.31■□□□□ 0.2
CCNB3P1-201ENST00000504855 CNGB1Q14028 1251 aaPredicted RBP16.31■□□□□ 0.2
CCNB3P1-201ENST00000504855 CCDC184Q52MB2 194 aa16.31■□□□□ 0.2
CCNB3P1-201ENST00000504855 USP54Q70EL1 1684 aa16.3■□□□□ 0.2
CCNB3P1-201ENST00000504855 INSRP06213 1382 aa16.3■□□□□ 0.2
CCNB3P1-201ENST00000504855 TTC21AQ8NDW8 1320 aa16.29■□□□□ 0.2
CCNB3P1-201ENST00000504855 PNISRQ8TF01 805 aaKnown RBP16.28■□□□□ 0.2
CCNB3P1-201ENST00000504855 MSH6P52701 1360 aa16.28■□□□□ 0.2
CCNB3P1-201ENST00000504855 NUTM2FA1L443 756 aa16.28■□□□□ 0.2
CCNB3P1-201ENST00000504855 PHF8Q9UPP1 1060 aa16.28■□□□□ 0.2
CCNB3P1-201ENST00000504855 MST1RQ04912 1400 aa16.27■□□□□ 0.19
CCNB3P1-201ENST00000504855 CADPS2Q86UW7 1296 aa16.27■□□□□ 0.19
CCNB3P1-201ENST00000504855 NGDNQ8NEJ9 315 aaKnown RBP16.27■□□□□ 0.19
CCNB3P1-201ENST00000504855 C1orf167Q5SNV9 1468 aa16.27■□□□□ 0.19
CCNB3P1-201ENST00000504855 TTC21BQ7Z4L5 1316 aa16.26■□□□□ 0.19
CCNB3P1-201ENST00000504855 ATF3P18847 181 aa16.26■□□□□ 0.19
CCNB3P1-201ENST00000504855 RBM33Q96EV2 1170 aaKnown RBP16.26■□□□□ 0.19
CCNB3P1-201ENST00000504855 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCNB3P1-201ENST00000504855 GGNBP2Q9H3C7 697 aa16.25■□□□□ 0.19
CCNB3P1-201ENST00000504855 PIK3C2AO00443 1686 aa16.24■□□□□ 0.19
CCNB3P1-201ENST00000504855 SRCAPQ6ZRS2 3230 aa16.24■□□□□ 0.19
CCNB3P1-201ENST00000504855 PMFBP1Q8TBY8 1022 aa16.24■□□□□ 0.19
CCNB3P1-201ENST00000504855 YTHDC1Q96MU7 727 aaKnown RBP16.24■□□□□ 0.19
CCNB3P1-201ENST00000504855 AATKQ6ZMQ8 1374 aa16.24■□□□□ 0.19
CCNB3P1-201ENST00000504855 USP31Q70CQ4 1352 aa16.24■□□□□ 0.19
CCNB3P1-201ENST00000504855 OVOS2A0A0J9YW53 1432 aa16.24■□□□□ 0.19
CCNB3P1-201ENST00000504855 OVOS2Q6IE36 1432 aa16.24■□□□□ 0.19
CCNB3P1-201ENST00000504855 CENPBP07199 599 aaPredicted RBP16.23■□□□□ 0.19
CCNB3P1-201ENST00000504855 MAP2P11137 1827 aaKnown RBP16.23■□□□□ 0.19
CCNB3P1-201ENST00000504855 NME9Q86XW9 330 aa16.22■□□□□ 0.19
CCNB3P1-201ENST00000504855 UPF1Q92900 1129 aaKnown RBP eCLIP16.22■□□□□ 0.19
CCNB3P1-201ENST00000504855 COG3Q96JB2 828 aa16.22■□□□□ 0.19
CCNB3P1-201ENST00000504855 SMG6Q86US8 1419 aaKnown RBP16.22■□□□□ 0.19
CCNB3P1-201ENST00000504855 ESCO1Q5FWF5 840 aa16.21■□□□□ 0.19
CCNB3P1-201ENST00000504855 FAM9BQ8IZU0 186 aa16.21■□□□□ 0.19
CCNB3P1-201ENST00000504855 SHPRHQ149N8 1683 aa16.21■□□□□ 0.19
CCNB3P1-201ENST00000504855 TRPM3Q9HCF6 1732 aaPredicted RBP16.21■□□□□ 0.19
CCNB3P1-201ENST00000504855 MARF1Q9Y4F3 1742 aaKnown RBP16.21■□□□□ 0.19
CCNB3P1-201ENST00000504855 CFAP53Q96M91 514 aa16.2■□□□□ 0.18
CCNB3P1-201ENST00000504855 BLMP54132 1417 aaPredicted RBP16.19■□□□□ 0.18
CCNB3P1-201ENST00000504855 MTHFSP49914 203 aa16.19■□□□□ 0.18
CCNB3P1-201ENST00000504855 CDK12Q9NYV4 1490 aaPredicted RBP16.18■□□□□ 0.18
CCNB3P1-201ENST00000504855 PNPLA6Q8IY17 1366 aa16.18■□□□□ 0.18
CCNB3P1-201ENST00000504855 COL3A1P02461 1466 aaPredicted RBP16.17■□□□□ 0.18
CCNB3P1-201ENST00000504855 TNNT2P45379 298 aaPredicted RBP16.17■□□□□ 0.18
CCNB3P1-201ENST00000504855 ORAI2Q96SN7 254 aa16.17■□□□□ 0.18
CCNB3P1-201ENST00000504855 PSME1Q06323 249 aa16.16■□□□□ 0.18
CCNB3P1-201ENST00000504855 WDR43Q15061 677 aaKnown RBP eCLIP16.16■□□□□ 0.18
CCNB3P1-201ENST00000504855 ALS2Q96Q42 1657 aa16.15■□□□□ 0.18
CCNB3P1-201ENST00000504855 HNRNPUQ00839 825 aaKnown RBP eCLIP16.14■□□□□ 0.17
CCNB3P1-201ENST00000504855 SBNO1A3KN83 1393 aa16.14■□□□□ 0.17
CCNB3P1-201ENST00000504855 ZBED9Q6R2W3 1325 aa16.13■□□□□ 0.17
CCNB3P1-201ENST00000504855 NPHP3Q7Z494 1330 aa16.13■□□□□ 0.17
CCNB3P1-201ENST00000504855 POLKQ9UBT6 870 aa16.13■□□□□ 0.17
CCNB3P1-201ENST00000504855 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
CCNB3P1-201ENST00000504855 KIF24Q5T7B8 1368 aa16.13■□□□□ 0.17
CCNB3P1-201ENST00000504855 FOXO3O43524 673 aa16.12■□□□□ 0.17
CCNB3P1-201ENST00000504855 PHRF1Q9P1Y6 1649 aaKnown RBP16.12■□□□□ 0.17
CCNB3P1-201ENST00000504855 ABTB2Q8N961 1025 aa16.11■□□□□ 0.17
CCNB3P1-201ENST00000504855 SLAIN2Q9P270 581 aa16.11■□□□□ 0.17
CCNB3P1-201ENST00000504855 ADAMTS8Q9UP79 889 aa16.11■□□□□ 0.17
CCNB3P1-201ENST00000504855 NHSL1Q5SYE7 1610 aa16.11■□□□□ 0.17
CCNB3P1-201ENST00000504855 PXDNQ92626 1479 aa16.11■□□□□ 0.17
CCNB3P1-201ENST00000504855 ROBO1Q9Y6N7 1651 aa16.11■□□□□ 0.17
CCNB3P1-201ENST00000504855 SLIT3O75094 1523 aa16.11■□□□□ 0.17
CCNB3P1-201ENST00000504855 NLRP6P59044 892 aa16.11■□□□□ 0.17
CCNB3P1-201ENST00000504855 NUDCQ9Y266 331 aa16.11■□□□□ 0.17
CCNB3P1-201ENST00000504855 PAK3O75914 559 aaPredicted RBP16.1■□□□□ 0.17
CCNB3P1-201ENST00000504855 KRT28Q7Z3Y7 464 aa16.1■□□□□ 0.17
CCNB3P1-201ENST00000504855 NFAT5O94916 1531 aa16.09■□□□□ 0.17
CCNB3P1-201ENST00000504855 PEAK1Q9H792 1746 aa16.09■□□□□ 0.17
CCNB3P1-201ENST00000504855 BRINP3Q76B58 766 aa16.09■□□□□ 0.17
CCNB3P1-201ENST00000504855 LTN1O94822 1766 aa16.08■□□□□ 0.16
CCNB3P1-201ENST00000504855 DIAPH1O60610 1272 aaKnown RBP16.08■□□□□ 0.16
CCNB3P1-201ENST00000504855 NGEFQ8N5V2 710 aa16.08■□□□□ 0.16
CCNB3P1-201ENST00000504855 TNS3Q68CZ2 1445 aa16.08■□□□□ 0.16
CCNB3P1-201ENST00000504855 USP19O94966 1318 aa16.07■□□□□ 0.16
CCNB3P1-201ENST00000504855 RTL1A6NKG5 1358 aa16.07■□□□□ 0.16
CCNB3P1-201ENST00000504855 KCNH5Q8NCM2 988 aa16.07■□□□□ 0.16
CCNB3P1-201ENST00000504855 FLT4P35916 1363 aa16.06■□□□□ 0.16
CCNB3P1-201ENST00000504855 JCADQ9P266 1359 aa16.06■□□□□ 0.16
CCNB3P1-201ENST00000504855 EMILIN1Q9Y6C2 1016 aa16.06■□□□□ 0.16
CCNB3P1-201ENST00000504855 CRYBG1Q9Y4K1 1723 aa16.06■□□□□ 0.16
CCNB3P1-201ENST00000504855 ARHGEF10O15013 1369 aa16.05■□□□□ 0.16
CCNB3P1-201ENST00000504855 RNF39Q9H2S5 420 aa16.05■□□□□ 0.16
CCNB3P1-201ENST00000504855 SOS2Q07890 1332 aaPredicted RBP16.05■□□□□ 0.16
CCNB3P1-201ENST00000504855 RGPD1P0DJD0 1748 aa16.04■□□□□ 0.16
CCNB3P1-201ENST00000504855 RRS1Q15050 365 aaKnown RBP16.04■□□□□ 0.16
CCNB3P1-201ENST00000504855 NCBP3Q53F19 620 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms