RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 NUTM2EB1AL46 878 aaPredicted RBP13.65□□□□□ -0.22
DDX41-203ENST00000504781 NUTM2AQ8IVF1 878 aaPredicted RBP13.65□□□□□ -0.22
DDX41-203ENST00000504781 CD163L1Q9NR16 1453 aa13.65□□□□□ -0.22
DDX41-203ENST00000504781 PRR36Q9H6K5 1346 aa13.64□□□□□ -0.23
DDX41-203ENST00000504781 USP32Q8NFA0 1604 aa13.64□□□□□ -0.23
DDX41-203ENST00000504781 FAM9BQ8IZU0 186 aa13.64□□□□□ -0.23
DDX41-203ENST00000504781 ANKARQ7Z5J8 1434 aa13.64□□□□□ -0.23
DDX41-203ENST00000504781 COL16A1Q07092 1604 aaPredicted RBP13.62□□□□□ -0.23
DDX41-203ENST00000504781 DDX17Q92841 729 aaKnown RBP13.62□□□□□ -0.23
DDX41-203ENST00000504781 EDC4Q6P2E9 1401 aaKnown RBP13.62□□□□□ -0.23
DDX41-203ENST00000504781 ACEP12821 1306 aa13.62□□□□□ -0.23
DDX41-203ENST00000504781 SPATA31A6Q5VVP1 1343 aa13.62□□□□□ -0.23
DDX41-203ENST00000504781 INSRP06213 1382 aa13.61□□□□□ -0.23
DDX41-203ENST00000504781 DCCP43146 1447 aa13.6□□□□□ -0.23
DDX41-203ENST00000504781 MST1RQ04912 1400 aa13.6□□□□□ -0.23
DDX41-203ENST00000504781 POLR3AO14802 1390 aaPredicted RBP13.59□□□□□ -0.23
DDX41-203ENST00000504781 ADGRL3Q9HAR2 1447 aa13.59□□□□□ -0.23
DDX41-203ENST00000504781 NGDNQ8NEJ9 315 aaKnown RBP13.59□□□□□ -0.23
DDX41-203ENST00000504781 AHDC1Q5TGY3 1603 aaPredicted RBP13.59□□□□□ -0.23
DDX41-203ENST00000504781 CDC42BPGQ6DT37 1551 aa13.58□□□□□ -0.23
DDX41-203ENST00000504781 NUTM2FA1L443 756 aa13.58□□□□□ -0.24
DDX41-203ENST00000504781 LRRC59Q96AG4 307 aaKnown RBP13.58□□□□□ -0.24
DDX41-203ENST00000504781 CFAP53Q96M91 514 aa13.58□□□□□ -0.24
DDX41-203ENST00000504781 GGNBP2Q9H3C7 697 aa13.58□□□□□ -0.24
DDX41-203ENST00000504781 TTC21AQ8NDW8 1320 aa13.58□□□□□ -0.24
DDX41-203ENST00000504781 LRP6O75581 1613 aa13.57□□□□□ -0.24
DDX41-203ENST00000504781 MTHFSP49914 203 aa13.57□□□□□ -0.24
DDX41-203ENST00000504781 ZNF772Q68DY9 489 aaPredicted RBP13.57□□□□□ -0.24
DDX41-203ENST00000504781 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.57□□□□□ -0.24
DDX41-203ENST00000504781 PHF8Q9UPP1 1060 aa13.57□□□□□ -0.24
DDX41-203ENST00000504781 TTC21BQ7Z4L5 1316 aa13.57□□□□□ -0.24
DDX41-203ENST00000504781 ITSN1Q15811 1721 aa13.56□□□□□ -0.24
DDX41-203ENST00000504781 AKAP12Q02952 1782 aa13.56□□□□□ -0.24
DDX41-203ENST00000504781 HNRNPUQ00839 825 aaKnown RBP eCLIP13.56□□□□□ -0.24
DDX41-203ENST00000504781 PMFBP1Q8TBY8 1022 aa13.56□□□□□ -0.24
DDX41-203ENST00000504781 COG3Q96JB2 828 aa13.56□□□□□ -0.24
DDX41-203ENST00000504781 ORAI2Q96SN7 254 aa13.56□□□□□ -0.24
DDX41-203ENST00000504781 FMN2Q9NZ56 1722 aa13.56□□□□□ -0.24
DDX41-203ENST00000504781 WDR43Q15061 677 aaKnown RBP eCLIP13.55□□□□□ -0.24
DDX41-203ENST00000504781 TOPAZ1Q8N9V7 1692 aa13.55□□□□□ -0.24
DDX41-203ENST00000504781 NALCNQ8IZF0 1738 aa13.55□□□□□ -0.24
DDX41-203ENST00000504781 C1orf167Q5SNV9 1468 aa13.55□□□□□ -0.24
DDX41-203ENST00000504781 RGPD8O14715 1765 aaPredicted RBP13.54□□□□□ -0.24
DDX41-203ENST00000504781 ADAMTS8Q9UP79 889 aa13.54□□□□□ -0.24
DDX41-203ENST00000504781 USP6P35125 1406 aa13.54□□□□□ -0.24
DDX41-203ENST00000504781 SSH2Q76I76 1423 aa13.54□□□□□ -0.24
DDX41-203ENST00000504781 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
DDX41-203ENST00000504781 TNNT2P45379 298 aaPredicted RBP13.53□□□□□ -0.24
DDX41-203ENST00000504781 PSME1Q06323 249 aa13.53□□□□□ -0.24
DDX41-203ENST00000504781 ESCO1Q5FWF5 840 aa13.53□□□□□ -0.24
DDX41-203ENST00000504781 C8orf37Q96NL8 207 aa13.53□□□□□ -0.24
DDX41-203ENST00000504781 MON2Q7Z3U7 1717 aa13.53□□□□□ -0.24
DDX41-203ENST00000504781 ADAMTS2O95450 1211 aa13.52□□□□□ -0.25
DDX41-203ENST00000504781 RXRBP28702 533 aa13.52□□□□□ -0.25
DDX41-203ENST00000504781 NME9Q86XW9 330 aa13.52□□□□□ -0.25
DDX41-203ENST00000504781 NGEFQ8N5V2 710 aa13.52□□□□□ -0.25
DDX41-203ENST00000504781 NUDCQ9Y266 331 aa13.52□□□□□ -0.25
DDX41-203ENST00000504781 AFF2P51816 1311 aa13.52□□□□□ -0.25
DDX41-203ENST00000504781 AATKQ6ZMQ8 1374 aa13.52□□□□□ -0.25
DDX41-203ENST00000504781 ANKRD26Q9UPS8 1709 aa13.52□□□□□ -0.25
DDX41-203ENST00000504781 USP31Q70CQ4 1352 aa13.51□□□□□ -0.25
DDX41-203ENST00000504781 ZBED9Q6R2W3 1325 aa13.51□□□□□ -0.25
DDX41-203ENST00000504781 KIF20BQ96Q89 1820 aa13.5□□□□□ -0.25
DDX41-203ENST00000504781 NHSL1Q5SYE7 1610 aa13.5□□□□□ -0.25
DDX41-203ENST00000504781 PNPLA6Q8IY17 1366 aa13.5□□□□□ -0.25
DDX41-203ENST00000504781 NGLY1Q96IV0 654 aa13.5□□□□□ -0.25
DDX41-203ENST00000504781 POLKQ9UBT6 870 aa13.5□□□□□ -0.25
DDX41-203ENST00000504781 XPCQ01831 940 aaPredicted RBP13.49□□□□□ -0.25
DDX41-203ENST00000504781 PNNQ9H307 717 aaKnown RBP13.49□□□□□ -0.25
DDX41-203ENST00000504781 QTRT2Q9H974 415 aaKnown RBP13.48□□□□□ -0.25
DDX41-203ENST00000504781 SOS2Q07890 1332 aaPredicted RBP13.47□□□□□ -0.25
DDX41-203ENST00000504781 FOXO3O43524 673 aa13.47□□□□□ -0.25
DDX41-203ENST00000504781 DIAPH1O60610 1272 aaKnown RBP13.47□□□□□ -0.25
DDX41-203ENST00000504781 NLRP6P59044 892 aa13.47□□□□□ -0.25
DDX41-203ENST00000504781 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
DDX41-203ENST00000504781 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
DDX41-203ENST00000504781 ABTB2Q8N961 1025 aa13.47□□□□□ -0.25
DDX41-203ENST00000504781 ZRANB1Q9UGI0 708 aa13.47□□□□□ -0.25
DDX41-203ENST00000504781 MAP2P11137 1827 aaKnown RBP13.46□□□□□ -0.25
DDX41-203ENST00000504781 KRT28Q7Z3Y7 464 aa13.46□□□□□ -0.25
DDX41-203ENST00000504781 NPHP3Q7Z494 1330 aa13.45□□□□□ -0.26
DDX41-203ENST00000504781 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
DDX41-203ENST00000504781 NRKQ7Z2Y5 1582 aa13.44□□□□□ -0.26
DDX41-203ENST00000504781 OVOS2A0A0J9YW53 1432 aa13.43□□□□□ -0.26
DDX41-203ENST00000504781 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
DDX41-203ENST00000504781 FCHSD2O94868 740 aa13.43□□□□□ -0.26
DDX41-203ENST00000504781 BLMP54132 1417 aaPredicted RBP13.43□□□□□ -0.26
DDX41-203ENST00000504781 RBM6P78332 1123 aaKnown RBP13.43□□□□□ -0.26
DDX41-203ENST00000504781 OVOS2Q6IE36 1432 aa13.43□□□□□ -0.26
DDX41-203ENST00000504781 KCNH5Q8NCM2 988 aa13.43□□□□□ -0.26
DDX41-203ENST00000504781 RUNDC1Q96C34 613 aa13.43□□□□□ -0.26
DDX41-203ENST00000504781 USP21Q9UK80 565 aa13.43□□□□□ -0.26
DDX41-203ENST00000504781 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
DDX41-203ENST00000504781 U2AF1L5P0DN76 240 aaPredicted RBP13.42□□□□□ -0.26
DDX41-203ENST00000504781 U2AF1Q01081 240 aaKnown RBP eCLIP13.42□□□□□ -0.263e-7■■■■□ 19.9
DDX41-203ENST00000504781 UPF1Q92900 1129 aaKnown RBP eCLIP13.42□□□□□ -0.26
DDX41-203ENST00000504781 KIF24Q5T7B8 1368 aa13.42□□□□□ -0.26
DDX41-203ENST00000504781 KIF1AQ12756 1690 aa13.41□□□□□ -0.26
DDX41-203ENST00000504781 SMG6Q86US8 1419 aaKnown RBP13.41□□□□□ -0.26
DDX41-203ENST00000504781 FBLN1P23142 703 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 193.2 ms