RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 GGNBP2Q9H3C7 697 aa16.01■□□□□ 0.15
POLR2J3-210ENST00000504677 USP54Q70EL1 1684 aa16.01■□□□□ 0.15
POLR2J3-210ENST00000504677 TTC21BQ7Z4L5 1316 aa16■□□□□ 0.15
POLR2J3-210ENST00000504677 LRRC7Q96NW7 1537 aa16■□□□□ 0.15
POLR2J3-210ENST00000504677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16■□□□□ 0.15
POLR2J3-210ENST00000504677 CFAP53Q96M91 514 aa16■□□□□ 0.15
POLR2J3-210ENST00000504677 BLMP54132 1417 aaPredicted RBP16■□□□□ 0.15
POLR2J3-210ENST00000504677 WDR43Q15061 677 aaKnown RBP eCLIP15.99■□□□□ 0.15
POLR2J3-210ENST00000504677 PHF8Q9UPP1 1060 aa15.99■□□□□ 0.15
POLR2J3-210ENST00000504677 MSH6P52701 1360 aa15.99■□□□□ 0.15
POLR2J3-210ENST00000504677 AATKQ6ZMQ8 1374 aa15.99■□□□□ 0.15
POLR2J3-210ENST00000504677 OVOS2A0A0J9YW53 1432 aa15.98■□□□□ 0.15
POLR2J3-210ENST00000504677 OVOS2Q6IE36 1432 aa15.98■□□□□ 0.15
POLR2J3-210ENST00000504677 COG3Q96JB2 828 aa15.98■□□□□ 0.15
POLR2J3-210ENST00000504677 XIRP1Q702N8 1843 aaKnown RBP15.98■□□□□ 0.15
POLR2J3-210ENST00000504677 ZBED9Q6R2W3 1325 aa15.97■□□□□ 0.15
POLR2J3-210ENST00000504677 SMG6Q86US8 1419 aaKnown RBP15.97■□□□□ 0.15
POLR2J3-210ENST00000504677 ATF3P18847 181 aa15.97■□□□□ 0.15
POLR2J3-210ENST00000504677 PMFBP1Q8TBY8 1022 aa15.97■□□□□ 0.15
POLR2J3-210ENST00000504677 SHPRHQ149N8 1683 aa15.97■□□□□ 0.15
POLR2J3-210ENST00000504677 TNNT2P45379 298 aaPredicted RBP15.96■□□□□ 0.15
POLR2J3-210ENST00000504677 NME9Q86XW9 330 aa15.96■□□□□ 0.15
POLR2J3-210ENST00000504677 RBM33Q96EV2 1170 aaKnown RBP15.96■□□□□ 0.15
POLR2J3-210ENST00000504677 USP31Q70CQ4 1352 aa15.96■□□□□ 0.15
POLR2J3-210ENST00000504677 C1orf167Q5SNV9 1468 aa15.96■□□□□ 0.14
POLR2J3-210ENST00000504677 PIK3C2AO00443 1686 aa15.95■□□□□ 0.14
POLR2J3-210ENST00000504677 MST1RQ04912 1400 aa15.95■□□□□ 0.14
POLR2J3-210ENST00000504677 MTHFSP49914 203 aa15.95■□□□□ 0.14
POLR2J3-210ENST00000504677 CADPS2Q86UW7 1296 aa15.95■□□□□ 0.14
POLR2J3-210ENST00000504677 CDK12Q9NYV4 1490 aaPredicted RBP15.94■□□□□ 0.14
POLR2J3-210ENST00000504677 COL3A1P02461 1466 aaPredicted RBP15.93■□□□□ 0.14
POLR2J3-210ENST00000504677 ESCO1Q5FWF5 840 aa15.93■□□□□ 0.14
POLR2J3-210ENST00000504677 MAP2P11137 1827 aaKnown RBP15.93■□□□□ 0.14
POLR2J3-210ENST00000504677 ZNF335Q9H4Z2 1342 aaPredicted RBP15.93■□□□□ 0.14
POLR2J3-210ENST00000504677 PNPLA6Q8IY17 1366 aa15.92■□□□□ 0.14
POLR2J3-210ENST00000504677 ADAMTS8Q9UP79 889 aa15.9■□□□□ 0.14
POLR2J3-210ENST00000504677 NUDCQ9Y266 331 aa15.9■□□□□ 0.14
POLR2J3-210ENST00000504677 TRPM3Q9HCF6 1732 aaPredicted RBP15.9■□□□□ 0.14
POLR2J3-210ENST00000504677 MARF1Q9Y4F3 1742 aaKnown RBP15.89■□□□□ 0.13
POLR2J3-210ENST00000504677 PSME1Q06323 249 aa15.88■□□□□ 0.13
POLR2J3-210ENST00000504677 POLKQ9UBT6 870 aa15.88■□□□□ 0.13
POLR2J3-210ENST00000504677 NGEFQ8N5V2 710 aa15.87■□□□□ 0.13
POLR2J3-210ENST00000504677 ZRANB1Q9UGI0 708 aa15.87■□□□□ 0.13
POLR2J3-210ENST00000504677 KIF24Q5T7B8 1368 aa15.87■□□□□ 0.13
POLR2J3-210ENST00000504677 DIAPH1O60610 1272 aaKnown RBP15.86■□□□□ 0.13
POLR2J3-210ENST00000504677 ORAI2Q96SN7 254 aa15.86■□□□□ 0.13
POLR2J3-210ENST00000504677 ABTB2Q8N961 1025 aa15.85■□□□□ 0.13
POLR2J3-210ENST00000504677 NPHP3Q7Z494 1330 aa15.85■□□□□ 0.13
POLR2J3-210ENST00000504677 ALS2Q96Q42 1657 aa15.84■□□□□ 0.13
POLR2J3-210ENST00000504677 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
POLR2J3-210ENST00000504677 NLRP6P59044 892 aa15.84■□□□□ 0.13
POLR2J3-210ENST00000504677 PDE3BQ13370 1112 aa15.83■□□□□ 0.12
POLR2J3-210ENST00000504677 PNNQ9H307 717 aaKnown RBP15.83■□□□□ 0.12
POLR2J3-210ENST00000504677 EMILIN1Q9Y6C2 1016 aa15.83■□□□□ 0.12
POLR2J3-210ENST00000504677 SBNO1A3KN83 1393 aa15.83■□□□□ 0.12
POLR2J3-210ENST00000504677 SLIT3O75094 1523 aa15.83■□□□□ 0.12
POLR2J3-210ENST00000504677 FOXO3O43524 673 aa15.82■□□□□ 0.12
POLR2J3-210ENST00000504677 RTL1A6NKG5 1358 aa15.82■□□□□ 0.12
POLR2J3-210ENST00000504677 FLT4P35916 1363 aa15.82■□□□□ 0.12
POLR2J3-210ENST00000504677 IQSEC2Q5JU85 1478 aa15.82■□□□□ 0.12
POLR2J3-210ENST00000504677 LTBP4Q8N2S1 1624 aa15.82■□□□□ 0.12
POLR2J3-210ENST00000504677 PHRF1Q9P1Y6 1649 aaKnown RBP15.82■□□□□ 0.12
POLR2J3-210ENST00000504677 PEAK1Q9H792 1746 aa15.82■□□□□ 0.12
POLR2J3-210ENST00000504677 PPM1GO15355 546 aaPredicted RBP15.81■□□□□ 0.12
POLR2J3-210ENST00000504677 NFAT5O94916 1531 aa15.81■□□□□ 0.12
POLR2J3-210ENST00000504677 U2AF1L5P0DN76 240 aaPredicted RBP15.81■□□□□ 0.12
POLR2J3-210ENST00000504677 U2AF1Q01081 240 aaKnown RBP eCLIP15.81■□□□□ 0.12
POLR2J3-210ENST00000504677 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
POLR2J3-210ENST00000504677 KRT28Q7Z3Y7 464 aa15.81■□□□□ 0.12
POLR2J3-210ENST00000504677 RUNDC1Q96C34 613 aa15.81■□□□□ 0.12
POLR2J3-210ENST00000504677 PXDNQ92626 1479 aa15.8■□□□□ 0.12
POLR2J3-210ENST00000504677 RRS1Q15050 365 aaKnown RBP15.8■□□□□ 0.12
POLR2J3-210ENST00000504677 KCNH5Q8NCM2 988 aa15.8■□□□□ 0.12
POLR2J3-210ENST00000504677 TNS3Q68CZ2 1445 aa15.79■□□□□ 0.12
POLR2J3-210ENST00000504677 U2SURPO15042 1029 aaKnown RBP15.79■□□□□ 0.12
POLR2J3-210ENST00000504677 LTN1O94822 1766 aa15.79■□□□□ 0.12
POLR2J3-210ENST00000504677 USP19O94966 1318 aa15.78■□□□□ 0.12
POLR2J3-210ENST00000504677 MAP3K19Q56UN5 1328 aa15.78■□□□□ 0.12
POLR2J3-210ENST00000504677 SLAIN2Q9P270 581 aa15.78■□□□□ 0.12
POLR2J3-210ENST00000504677 NHSL1Q5SYE7 1610 aa15.78■□□□□ 0.12
POLR2J3-210ENST00000504677 MED1Q15648 1581 aaPredicted RBP15.78■□□□□ 0.12
POLR2J3-210ENST00000504677 ARHGEF10O15013 1369 aa15.77■□□□□ 0.12
POLR2J3-210ENST00000504677 FCHSD2O94868 740 aa15.77■□□□□ 0.12
POLR2J3-210ENST00000504677 FBLN1P23142 703 aa15.77■□□□□ 0.12
POLR2J3-210ENST00000504677 IL13P35225 146 aa15.77■□□□□ 0.12
POLR2J3-210ENST00000504677 BRINP3Q76B58 766 aa15.77■□□□□ 0.12
POLR2J3-210ENST00000504677 CCDC146Q8IYE0 955 aa15.77■□□□□ 0.12
POLR2J3-210ENST00000504677 RGPD1P0DJD0 1748 aa15.77■□□□□ 0.11
POLR2J3-210ENST00000504677 MAPK8IP3Q9UPT6 1336 aa15.76■□□□□ 0.11
POLR2J3-210ENST00000504677 APAF1O14727 1248 aa15.76■□□□□ 0.11
POLR2J3-210ENST00000504677 NEFMP07197 916 aa15.75■□□□□ 0.11
POLR2J3-210ENST00000504677 AMPHP49418 695 aa15.75■□□□□ 0.11
POLR2J3-210ENST00000504677 NUTM2GQ5VZR2 741 aa15.75■□□□□ 0.11
POLR2J3-210ENST00000504677 ABCC6O95255 1503 aa15.74■□□□□ 0.11
POLR2J3-210ENST00000504677 SOX12O15370 315 aa15.74■□□□□ 0.11
POLR2J3-210ENST00000504677 XPCQ01831 940 aaPredicted RBP15.74■□□□□ 0.11
POLR2J3-210ENST00000504677 CRYBG1Q9Y4K1 1723 aa15.74■□□□□ 0.11
POLR2J3-210ENST00000504677 ZNF521Q96K83 1311 aa15.73■□□□□ 0.11
POLR2J3-210ENST00000504677 CCDC27Q2M243 656 aa15.73■□□□□ 0.11
POLR2J3-210ENST00000504677 SOS2Q07890 1332 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms