RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 ANAPC15P60006 121 aa12.29□□□□□ -0.44
ITGA1-203ENST00000504669 KIF18AQ8NI77 898 aa12.29□□□□□ -0.44
ITGA1-203ENST00000504669 CCDC181Q5TID7 509 aa12.29□□□□□ -0.44
ITGA1-203ENST00000504669 ARMCX6Q7L4S7 300 aa12.29□□□□□ -0.44
ITGA1-203ENST00000504669 DNAI2Q9GZS0 605 aa12.29□□□□□ -0.44
ITGA1-203ENST00000504669 FAM177A1Q8N128 213 aaPredicted RBP12.28□□□□□ -0.44
ITGA1-203ENST00000504669 BIRC2Q13490 618 aa12.28□□□□□ -0.44
ITGA1-203ENST00000504669 JAKMIP3Q5VZ66 844 aa12.28□□□□□ -0.44
ITGA1-203ENST00000504669 PAXBP1Q9Y5B6 917 aa12.28□□□□□ -0.44
ITGA1-203ENST00000504669 CCDC192P0DO97 292 aa12.28□□□□□ -0.44
ITGA1-203ENST00000504669 CCDC92Q53HC0 331 aaPredicted RBP12.28□□□□□ -0.44
ITGA1-203ENST00000504669 ANKRD62A6NC57 917 aa12.27□□□□□ -0.44
ITGA1-203ENST00000504669 AKAP17AQ02040 695 aaKnown RBP12.27□□□□□ -0.44
ITGA1-203ENST00000504669 CCDC73Q6ZRK6 1079 aa12.27□□□□□ -0.44
ITGA1-203ENST00000504669 OFD1O75665 1012 aa12.27□□□□□ -0.45
ITGA1-203ENST00000504669 ZBTB17Q13105 803 aa12.27□□□□□ -0.45
ITGA1-203ENST00000504669 CDCA8Q53HL2 280 aa12.26□□□□□ -0.45
ITGA1-203ENST00000504669 KLHL10Q6JEL2 608 aa12.26□□□□□ -0.45
ITGA1-203ENST00000504669 CEP120Q8N960 986 aa12.26□□□□□ -0.45
ITGA1-203ENST00000504669 DDX27Q96GQ7 796 aaKnown RBP12.26□□□□□ -0.45
ITGA1-203ENST00000504669 PLIN1O60240 522 aa12.26□□□□□ -0.45
ITGA1-203ENST00000504669 CCDC175P0C221 793 aa12.26□□□□□ -0.45
ITGA1-203ENST00000504669 CCDC50Q8IVM0 306 aa12.26□□□□□ -0.45
ITGA1-203ENST00000504669 GPATCH3Q96I76 525 aa12.26□□□□□ -0.45
ITGA1-203ENST00000504669 CCDC148Q8NFR7 591 aa12.26□□□□□ -0.45
ITGA1-203ENST00000504669 FEZ2Q9UHY8 353 aaPredicted RBP12.26□□□□□ -0.45
ITGA1-203ENST00000504669 KIF7Q2M1P5 1343 aa12.26□□□□□ -0.45
ITGA1-203ENST00000504669 CAPN2P17655 700 aa12.25□□□□□ -0.45
ITGA1-203ENST00000504669 WDR78Q5VTH9 848 aa12.25□□□□□ -0.45
ITGA1-203ENST00000504669 ZNF397Q8NF99 534 aaPredicted RBP12.25□□□□□ -0.45
ITGA1-203ENST00000504669 CEP112Q8N8E3 955 aa12.25□□□□□ -0.45
ITGA1-203ENST00000504669 DDX12PQ92771 950 aa12.25□□□□□ -0.45
ITGA1-203ENST00000504669 SLMAPQ14BN4 828 aa12.25□□□□□ -0.45
ITGA1-203ENST00000504669 SH2D4BQ5SQS7 431 aa12.25□□□□□ -0.45
ITGA1-203ENST00000504669 NBPF11Q86T75 865 aa12.25□□□□□ -0.45
ITGA1-203ENST00000504669 BACH2Q9BYV9 841 aa12.25□□□□□ -0.45
ITGA1-203ENST00000504669 BRMS1Q9HCU9 246 aa12.25□□□□□ -0.45
ITGA1-203ENST00000504669 GOPCQ9HD26 462 aa12.25□□□□□ -0.45
ITGA1-203ENST00000504669 SMC3Q9UQE7 1217 aa12.24□□□□□ -0.45
ITGA1-203ENST00000504669 CENPJQ9HC77 1338 aaPredicted RBP12.24□□□□□ -0.45
ITGA1-203ENST00000504669 CEP135Q66GS9 1140 aa12.24□□□□□ -0.45
ITGA1-203ENST00000504669 CARD11Q9BXL7 1154 aa12.24□□□□□ -0.45
ITGA1-203ENST00000504669 BUB1BO60566 1050 aaPredicted RBP12.24□□□□□ -0.45
ITGA1-203ENST00000504669 CCDC121Q6ZUS5 278 aa12.24□□□□□ -0.45
ITGA1-203ENST00000504669 OTUD6BQ8N6M0 293 aa12.24□□□□□ -0.45
ITGA1-203ENST00000504669 RRAGDQ9NQL2 400 aaPredicted RBP12.24□□□□□ -0.45
ITGA1-203ENST00000504669 ATP2C2O75185 946 aa12.24□□□□□ -0.45
ITGA1-203ENST00000504669 SPECC1LQ69YQ0 1117 aa12.24□□□□□ -0.45
ITGA1-203ENST00000504669 LMNTD2Q8IXW0 634 aa12.24□□□□□ -0.45
ITGA1-203ENST00000504669 MRFAP1Q9Y605 127 aa12.24□□□□□ -0.45
ITGA1-203ENST00000504669 TRIM29Q14134 588 aa12.23□□□□□ -0.45
ITGA1-203ENST00000504669 ZBTB9Q96C00 473 aa12.23□□□□□ -0.45
ITGA1-203ENST00000504669 HYPKQ9NX55 129 aa12.23□□□□□ -0.45
ITGA1-203ENST00000504669 KIF1CO43896 1103 aaKnown RBP12.23□□□□□ -0.45
ITGA1-203ENST00000504669 POTEDQ86YR6 584 aa12.23□□□□□ -0.45
ITGA1-203ENST00000504669 INF2Q27J81 1249 aa12.23□□□□□ -0.45
ITGA1-203ENST00000504669 CHIC2Q9UKJ5 165 aa12.23□□□□□ -0.45
ITGA1-203ENST00000504669 RABGAP1Q9Y3P9 1069 aa12.23□□□□□ -0.45
ITGA1-203ENST00000504669 CHMP4CQ96CF2 233 aa12.23□□□□□ -0.45
ITGA1-203ENST00000504669 CCDC6Q16204 474 aa12.22□□□□□ -0.45
ITGA1-203ENST00000504669 DDX46Q7L014 1031 aaKnown RBP12.22□□□□□ -0.45
ITGA1-203ENST00000504669 IRAK4Q9NWZ3 460 aa12.22□□□□□ -0.45
ITGA1-203ENST00000504669 PPP1R1BQ9UD71 204 aaPredicted RBP12.22□□□□□ -0.45
ITGA1-203ENST00000504669 ZNF777Q9ULD5 760 aaPredicted RBP12.22□□□□□ -0.45
ITGA1-203ENST00000504669 VPS37CA5D8V6 355 aaPredicted RBP12.22□□□□□ -0.45
ITGA1-203ENST00000504669 CBFA2T2O43439 604 aa12.22□□□□□ -0.45
ITGA1-203ENST00000504669 NUCKS1Q9H1E3 243 aaKnown RBP12.22□□□□□ -0.45
ITGA1-203ENST00000504669 PDE1CQ14123 709 aaPredicted RBP12.22□□□□□ -0.45
ITGA1-203ENST00000504669 LRRC23Q53EV4 343 aaPredicted RBP12.22□□□□□ -0.45
ITGA1-203ENST00000504669 C16orf45Q96MC5 204 aaPredicted RBP12.22□□□□□ -0.45
ITGA1-203ENST00000504669 SMC1AQ14683 1233 aaKnown RBP12.22□□□□□ -0.45
ITGA1-203ENST00000504669 FAM114A2Q9NRY5 505 aa12.22□□□□□ -0.45
ITGA1-203ENST00000504669 WHAMMP3Q1A5X7 153 aa12.21□□□□□ -0.45
ITGA1-203ENST00000504669 DNAJC21Q5F1R6 531 aaKnown RBP12.21□□□□□ -0.45
ITGA1-203ENST00000504669 V9GYY5 206 aaPredicted RBP12.21□□□□□ -0.45
ITGA1-203ENST00000504669 CCDC172P0C7W6 258 aa12.21□□□□□ -0.45
ITGA1-203ENST00000504669 RLBP1P12271 317 aa12.21□□□□□ -0.45
ITGA1-203ENST00000504669 TRIM4Q9C037 500 aa12.21□□□□□ -0.45
ITGA1-203ENST00000504669 HDAC1Q13547 482 aaPredicted RBP12.21□□□□□ -0.45
ITGA1-203ENST00000504669 NBPF8Q3BBV2 869 aa12.21□□□□□ -0.45
ITGA1-203ENST00000504669 FILIP1LQ4L180 1135 aa12.21□□□□□ -0.45
ITGA1-203ENST00000504669 PPFIBP2Q8ND30 876 aa12.21□□□□□ -0.45
ITGA1-203ENST00000504669 GOLGA2Q08379 1002 aa12.21□□□□□ -0.46
ITGA1-203ENST00000504669 FBF1Q8TES7 1133 aa12.21□□□□□ -0.46
ITGA1-203ENST00000504669 REC8O95072 547 aa12.21□□□□□ -0.46
ITGA1-203ENST00000504669 ZNF365Q70YC5 407 aa12.21□□□□□ -0.46
ITGA1-203ENST00000504669 EBAG9O00559 213 aa12.2□□□□□ -0.46
ITGA1-203ENST00000504669 URI1O94763 535 aaPredicted RBP12.2□□□□□ -0.46
ITGA1-203ENST00000504669 CCDC47Q96A33 483 aaKnown RBP12.2□□□□□ -0.46
ITGA1-203ENST00000504669 PFDN1O60925 122 aa12.2□□□□□ -0.46
ITGA1-203ENST00000504669 NOL3O60936 208 aaKnown RBP12.2□□□□□ -0.46
ITGA1-203ENST00000504669 VPS18Q9P253 973 aa12.2□□□□□ -0.46
ITGA1-203ENST00000504669 LOC102724159A0A0B4J2E5 919 aa12.2□□□□□ -0.46
ITGA1-203ENST00000504669 PWP2Q15269 919 aaKnown RBP12.2□□□□□ -0.46
ITGA1-203ENST00000504669 SYCE3A1L190 88 aa12.2□□□□□ -0.46
ITGA1-203ENST00000504669 C6orf163Q5TEZ5 329 aa12.2□□□□□ -0.46
ITGA1-203ENST00000504669 ANKRD45Q5TZF3 282 aa12.19□□□□□ -0.46
ITGA1-203ENST00000504669 CCDC114Q96M63 670 aa12.19□□□□□ -0.46
ITGA1-203ENST00000504669 SERPINC1P01008 464 aa12.19□□□□□ -0.46
ITGA1-203ENST00000504669 SEPT11Q9NVA2 429 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms