RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 PCDHGA4Q9Y5G9 962 aa8.81□□□□□ -1
NPHP3-AS1-202ENST00000504440 RNF123Q5XPI4 1314 aa8.81□□□□□ -1
NPHP3-AS1-202ENST00000504440 SSTR3P32745 418 aaPredicted RBP8.81□□□□□ -1
NPHP3-AS1-202ENST00000504440 NBPF1Q3BBV0 1214 aa8.81□□□□□ -1
NPHP3-AS1-202ENST00000504440 PPRC1Q5VV67 1664 aaKnown RBP8.81□□□□□ -1
NPHP3-AS1-202ENST00000504440 C9orf84Q5VXU9 1444 aa8.81□□□□□ -1
NPHP3-AS1-202ENST00000504440 APBB1O00213 710 aa8.8□□□□□ -1
NPHP3-AS1-202ENST00000504440 CLUAP1Q96AJ1 413 aa8.8□□□□□ -1
NPHP3-AS1-202ENST00000504440 PLCH2O75038 1416 aa8.8□□□□□ -1
NPHP3-AS1-202ENST00000504440 TYW1BQ6NUM6 668 aa8.8□□□□□ -1
NPHP3-AS1-202ENST00000504440 SAMD9LQ8IVG5 1584 aa8.79□□□□□ -1
NPHP3-AS1-202ENST00000504440 MAP3K4Q9Y6R4 1608 aa8.79□□□□□ -1
NPHP3-AS1-202ENST00000504440 ADGBQ8N7X0 1667 aa8.79□□□□□ -1
NPHP3-AS1-202ENST00000504440 ARAP3Q8WWN8 1544 aa8.79□□□□□ -1
NPHP3-AS1-202ENST00000504440 UHRF1BP1Q6BDS2 1440 aa8.79□□□□□ -1
NPHP3-AS1-202ENST00000504440 SH3D19Q5HYK7 790 aa8.79□□□□□ -1
NPHP3-AS1-202ENST00000504440 METTL3Q86U44 580 aaKnown RBP8.79□□□□□ -1
NPHP3-AS1-202ENST00000504440 BEGAINQ9BUH8 593 aa8.79□□□□□ -1
NPHP3-AS1-202ENST00000504440 ARHGAP5Q13017 1502 aa8.79□□□□□ -1
NPHP3-AS1-202ENST00000504440 KIF15Q9NS87 1388 aa8.78□□□□□ -1
NPHP3-AS1-202ENST00000504440 RALGAPBQ86X10 1494 aa8.78□□□□□ -1
NPHP3-AS1-202ENST00000504440 EXOC6Q8TAG9 804 aa8.78□□□□□ -1
NPHP3-AS1-202ENST00000504440 CDCA7LQ96GN5 454 aa8.78□□□□□ -1
NPHP3-AS1-202ENST00000504440 ARID4BQ4LE39 1312 aaPredicted RBP8.78□□□□□ -1
NPHP3-AS1-202ENST00000504440 ROCK2O75116 1388 aaKnown RBP8.77□□□□□ -1
NPHP3-AS1-202ENST00000504440 CROCC2H7BZ55 1655 aa8.77□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 POTEIP0CG38 1075 aa8.77□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 MYBBP1AQ9BQG0 1328 aaKnown RBP8.77□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 CC2D1BQ5T0F9 858 aaKnown RBP8.77□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 PADI6Q6TGC4 694 aa8.77□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 PROCA1Q8NCQ7 364 aaPredicted RBP8.77□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 POLR3EQ9NVU0 708 aa8.77□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 NOP58Q9Y2X3 529 aaKnown RBP8.77□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 COL17A1Q9UMD9 1497 aaPredicted RBP8.76□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 ARHGEF5Q12774 1597 aa8.76□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 FBXW7Q969H0 707 aa8.76□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 LRPPRCP42704 1394 aaKnown RBP8.76□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 KDM4FA0A1W2PPD8 638 aa8.76□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 TSPOAP1O95153 1857 aa8.76□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 EFCAB2Q5VUJ9 269 aa8.76□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 SKAP1Q86WV1 359 aa8.76□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 FAM217BQ9NTX9 383 aaPredicted RBP8.76□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.76□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 PLIN1O60240 522 aa8.75□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 MCM6Q14566 821 aa8.75□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 RALBP1Q15311 655 aa8.75□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 PLEKHH2Q8IVE3 1493 aa8.75□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 CD109Q6YHK3 1445 aa8.75□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 PER1O15534 1290 aaPredicted RBP8.75□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 RRP1P56182 461 aaKnown RBP8.75□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 C6orf132Q5T0Z8 1188 aa8.75□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 SYCP2Q9BX26 1530 aa8.74□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 BRD4O60885 1362 aaPredicted RBP8.74□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 SKIV2LQ15477 1246 aaKnown RBP8.74□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 ABCC1P33527 1531 aa8.74□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 ARHGEF12Q9NZN5 1544 aa8.74□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 FANCAO15360 1455 aa8.74□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 SHANK2Q9UPX8 1470 aa8.74□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 DEKP35659 375 aaKnown RBP8.74□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 FOSBP53539 338 aa8.74□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 ZNF454Q8N9F8 522 aa8.74□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 RCAN3Q9UKA8 241 aa8.74□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 ADGRG1Q9Y653 693 aa8.74□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 OATP04181 439 aa8.73□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 RSPH4AQ5TD94 716 aa8.73□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 PXYLP1Q8TE99 480 aa8.73□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 CCDC141Q6ZP82 1450 aa8.73□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 NPM2Q86SE8 214 aaKnown RBP8.73□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 PANK3Q9H999 370 aa8.73□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 DISP3Q9P2K9 1392 aa8.72□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 PLA2R1Q13018 1463 aa8.72□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 NLRP13Q86W25 1043 aa8.72□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 KHSRPQ92945 711 aaKnown RBP eCLIP8.72□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 TESK2Q96S53 571 aa8.72□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 PRAG1Q86YV5 1406 aa8.72□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 FAM135AQ9P2D6 1515 aa8.71□□□□□ -1.01
NPHP3-AS1-202ENST00000504440 NUDT7P0C024 238 aa8.71□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 ZDHHC16Q969W1 377 aa8.71□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 IPO9Q96P70 1041 aaKnown RBP8.71□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 KTN1Q86UP2 1357 aaKnown RBP8.71□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 MAST1Q9Y2H9 1570 aa8.71□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 TRAK2O60296 914 aa8.71□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 MYSM1Q5VVJ2 828 aa8.71□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 PARD3Q8TEW0 1356 aa8.7□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 CFAP74Q9C0B2 1584 aa8.7□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 CCDC144AA2RUR9 1427 aa8.7□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 KDM5DQ9BY66 1539 aa8.7□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 A6NJR5 290 aa8.7□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 ANP32AP39687 249 aaKnown RBP8.7□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 ADAM33Q9BZ11 813 aa8.7□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 PODXL2Q9NZ53 605 aa8.7□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 TRAPPC8Q9Y2L5 1435 aa8.7□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 CERKQ8TCT0 537 aa8.7□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 POM121Q96HA1 1249 aa8.7□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 ADGRL1O94910 1474 aa8.69□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 A2MP01023 1474 aa8.69□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 NEO1Q92859 1461 aa8.69□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 C20orf194Q5TEA3 1177 aa8.69□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 CCDC82Q8N4S0 544 aa8.69□□□□□ -1.02
NPHP3-AS1-202ENST00000504440 SCAPERQ9BY12 1400 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms