RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 MSH5O43196 834 aa11.85□□□□□ -0.51
LINC02239-201ENST00000504339 CCDC27Q2M243 656 aa11.85□□□□□ -0.51
LINC02239-201ENST00000504339 SLC26A8Q96RN1 970 aa11.85□□□□□ -0.51
LINC02239-201ENST00000504339 POLKQ9UBT6 870 aa11.85□□□□□ -0.51
LINC02239-201ENST00000504339 C3P01024 1663 aa11.85□□□□□ -0.51
LINC02239-201ENST00000504339 ARHGAP23Q9P227 1491 aa11.85□□□□□ -0.51
LINC02239-201ENST00000504339 NME9Q86XW9 330 aa11.84□□□□□ -0.51
LINC02239-201ENST00000504339 CCDC61Q9Y6R9 512 aa11.84□□□□□ -0.51
LINC02239-201ENST00000504339 ADGRB2O60241 1585 aa11.84□□□□□ -0.51
LINC02239-201ENST00000504339 SLIT1O75093 1534 aa11.84□□□□□ -0.51
LINC02239-201ENST00000504339 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.83□□□□□ -0.51
LINC02239-201ENST00000504339 FANCIQ9NVI1 1328 aa11.83□□□□□ -0.52
LINC02239-201ENST00000504339 TRHP20396 242 aaPredicted RBP11.83□□□□□ -0.52
LINC02239-201ENST00000504339 NCBP3Q53F19 620 aaKnown RBP11.83□□□□□ -0.52
LINC02239-201ENST00000504339 WDR63Q8IWG1 891 aa11.83□□□□□ -0.52
LINC02239-201ENST00000504339 EDC4Q6P2E9 1401 aaKnown RBP11.83□□□□□ -0.52
LINC02239-201ENST00000504339 U2SURPO15042 1029 aaKnown RBP11.83□□□□□ -0.52
LINC02239-201ENST00000504339 KIF20BQ96Q89 1820 aa11.82□□□□□ -0.52
LINC02239-201ENST00000504339 SKAP1Q86WV1 359 aa11.82□□□□□ -0.52
LINC02239-201ENST00000504339 TRIM35Q9UPQ4 493 aa11.82□□□□□ -0.52
LINC02239-201ENST00000504339 CDC42BPGQ6DT37 1551 aa11.82□□□□□ -0.52
LINC02239-201ENST00000504339 DIAPH1O60610 1272 aaKnown RBP11.81□□□□□ -0.52
LINC02239-201ENST00000504339 TMPOP42166 694 aaKnown RBP11.81□□□□□ -0.52
LINC02239-201ENST00000504339 EMILIN1Q9Y6C2 1016 aa11.81□□□□□ -0.52
LINC02239-201ENST00000504339 KDM2BQ8NHM5 1336 aa11.81□□□□□ -0.52
LINC02239-201ENST00000504339 RARSP54136 660 aaKnown RBP11.8□□□□□ -0.52
LINC02239-201ENST00000504339 TBX22Q9Y458 520 aa11.8□□□□□ -0.52
LINC02239-201ENST00000504339 AMOTL2Q9Y2J4 779 aa11.79□□□□□ -0.52
LINC02239-201ENST00000504339 FER1L4A9Z1Z3 1794 aa11.79□□□□□ -0.52
LINC02239-201ENST00000504339 EID1Q9Y6B2 187 aa11.79□□□□□ -0.52
LINC02239-201ENST00000504339 MON2Q7Z3U7 1717 aa11.78□□□□□ -0.52
LINC02239-201ENST00000504339 NUTM2FA1L443 756 aa11.78□□□□□ -0.52
LINC02239-201ENST00000504339 RSPH6AQ9H0K4 717 aa11.78□□□□□ -0.52
LINC02239-201ENST00000504339 AATKQ6ZMQ8 1374 aa11.78□□□□□ -0.52
LINC02239-201ENST00000504339 PLEKHG3A1L390 1219 aa11.77□□□□□ -0.52
LINC02239-201ENST00000504339 PPM1GO15355 546 aaPredicted RBP11.77□□□□□ -0.52
LINC02239-201ENST00000504339 IL13P35225 146 aa11.77□□□□□ -0.52
LINC02239-201ENST00000504339 THEMISQ8N1K5 641 aaPredicted RBP11.77□□□□□ -0.53
LINC02239-201ENST00000504339 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.77□□□□□ -0.53
LINC02239-201ENST00000504339 TSR2Q969E8 191 aaKnown RBP11.77□□□□□ -0.53
LINC02239-201ENST00000504339 TNNQ9UQP3 1299 aa11.77□□□□□ -0.53
LINC02239-201ENST00000504339 ACEP12821 1306 aa11.77□□□□□ -0.53
LINC02239-201ENST00000504339 FCHSD2O94868 740 aa11.76□□□□□ -0.53
LINC02239-201ENST00000504339 RRS1Q15050 365 aaKnown RBP11.76□□□□□ -0.53
LINC02239-201ENST00000504339 PHACTR3Q96KR7 559 aa11.76□□□□□ -0.53
LINC02239-201ENST00000504339 ZNF692Q9BU19 519 aaPredicted RBP11.76□□□□□ -0.53
LINC02239-201ENST00000504339 AKAP12Q02952 1782 aa11.76□□□□□ -0.53
LINC02239-201ENST00000504339 PANK1Q8TE04 598 aa11.76□□□□□ -0.53
LINC02239-201ENST00000504339 LRRC7Q96NW7 1537 aa11.76□□□□□ -0.53
LINC02239-201ENST00000504339 SSH2Q76I76 1423 aa11.75□□□□□ -0.53
LINC02239-201ENST00000504339 TOPAZ1Q8N9V7 1692 aa11.75□□□□□ -0.53
LINC02239-201ENST00000504339 RLBP1P12271 317 aa11.75□□□□□ -0.53
LINC02239-201ENST00000504339 TTC21BQ7Z4L5 1316 aa11.75□□□□□ -0.53
LINC02239-201ENST00000504339 MAP2P11137 1827 aaKnown RBP11.75□□□□□ -0.53
LINC02239-201ENST00000504339 PTCH1Q13635 1447 aa11.75□□□□□ -0.53
LINC02239-201ENST00000504339 PRKAR2BP31323 418 aa11.75□□□□□ -0.53
LINC02239-201ENST00000504339 RIPK4P57078 832 aa11.75□□□□□ -0.53
LINC02239-201ENST00000504339 PDE3AQ14432 1141 aa11.75□□□□□ -0.53
LINC02239-201ENST00000504339 COG3Q96JB2 828 aa11.75□□□□□ -0.53
LINC02239-201ENST00000504339 BCL2L13Q9BXK5 485 aa11.75□□□□□ -0.53
LINC02239-201ENST00000504339 NRKQ7Z2Y5 1582 aa11.74□□□□□ -0.53
LINC02239-201ENST00000504339 HMOX1P09601 288 aa11.74□□□□□ -0.53
LINC02239-201ENST00000504339 CDK12Q9NYV4 1490 aaPredicted RBP11.74□□□□□ -0.53
LINC02239-201ENST00000504339 MYH16Q9H6N6 1097 aa11.74□□□□□ -0.53
LINC02239-201ENST00000504339 MAPK8IP3Q9UPT6 1336 aa11.74□□□□□ -0.53
LINC02239-201ENST00000504339 USP6P35125 1406 aa11.73□□□□□ -0.53
LINC02239-201ENST00000504339 TCERG1O14776 1098 aaKnown RBP11.73□□□□□ -0.53
LINC02239-201ENST00000504339 KCNA6P17658 529 aa11.73□□□□□ -0.53
LINC02239-201ENST00000504339 COG6Q9Y2V7 657 aa11.73□□□□□ -0.53
LINC02239-201ENST00000504339 OVOS2A0A0J9YW53 1432 aa11.73□□□□□ -0.53
LINC02239-201ENST00000504339 OVOS2Q6IE36 1432 aa11.73□□□□□ -0.53
LINC02239-201ENST00000504339 EXOSC9Q06265 439 aaKnown RBP11.72□□□□□ -0.53
LINC02239-201ENST00000504339 FRAT1Q92837 279 aaPredicted RBP11.72□□□□□ -0.53
LINC02239-201ENST00000504339 IL16Q14005 1332 aa11.72□□□□□ -0.53
LINC02239-201ENST00000504339 IGHDP01880 384 aa11.72□□□□□ -0.53
LINC02239-201ENST00000504339 XRN1Q8IZH2 1706 aaKnown RBP11.71□□□□□ -0.53
LINC02239-201ENST00000504339 CEP170BQ9Y4F5 1589 aaPredicted RBP11.71□□□□□ -0.53
LINC02239-201ENST00000504339 CENPQQ7L2Z9 268 aaPredicted RBP11.71□□□□□ -0.53
LINC02239-201ENST00000504339 ITSN1Q15811 1721 aa11.71□□□□□ -0.53
LINC02239-201ENST00000504339 ERICH6Q7L0X2 663 aa11.71□□□□□ -0.54
LINC02239-201ENST00000504339 PMFBP1Q8TBY8 1022 aa11.71□□□□□ -0.54
LINC02239-201ENST00000504339 DIP2AQ14689 1571 aa11.71□□□□□ -0.54
LINC02239-201ENST00000504339 MS4A1P11836 297 aa11.7□□□□□ -0.54
LINC02239-201ENST00000504339 THUMPD2Q9BTF0 503 aaKnown RBP11.7□□□□□ -0.54
LINC02239-201ENST00000504339 USP31Q70CQ4 1352 aa11.7□□□□□ -0.54
LINC02239-201ENST00000504339 PDE4AP27815 886 aa11.7□□□□□ -0.54
LINC02239-201ENST00000504339 NFE2L2Q16236 605 aa11.7□□□□□ -0.54
LINC02239-201ENST00000504339 BACH2Q9BYV9 841 aa11.7□□□□□ -0.54
LINC02239-201ENST00000504339 SSH1Q8WYL5 1049 aa11.69□□□□□ -0.54
LINC02239-201ENST00000504339 PNNQ9H307 717 aaKnown RBP11.69□□□□□ -0.54
LINC02239-201ENST00000504339 EIF4A2Q14240 407 aaKnown RBP11.69□□□□□ -0.54
LINC02239-201ENST00000504339 RIMS1Q86UR5 1692 aaKnown RBP11.68□□□□□ -0.54
LINC02239-201ENST00000504339 CT47B1P0C2W7 299 aaPredicted RBP11.68□□□□□ -0.54
LINC02239-201ENST00000504339 AEBP1Q8IUX7 1158 aa11.68□□□□□ -0.54
LINC02239-201ENST00000504339 CLUAP1Q96AJ1 413 aa11.68□□□□□ -0.54
LINC02239-201ENST00000504339 BCL11AQ9H165 835 aa11.68□□□□□ -0.54
LINC02239-201ENST00000504339 PEAK1Q9H792 1746 aa11.68□□□□□ -0.54
LINC02239-201ENST00000504339 HSP90AB2PQ58FF8 381 aa11.67□□□□□ -0.54
LINC02239-201ENST00000504339 PCDHB15Q9Y5E8 787 aa11.67□□□□□ -0.54
LINC02239-201ENST00000504339 PIK3R4Q99570 1358 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms