RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 RGPD2P0DJD1 1756 aa8.5□□□□□ -1.05
COPB2-204ENST00000504295 IBTKQ9P2D0 1353 aaPredicted RBP8.5□□□□□ -1.05
COPB2-204ENST00000504295 NHSL1Q5SYE7 1610 aa8.5□□□□□ -1.05
COPB2-204ENST00000504295 FSD2A1L4K1 749 aa8.5□□□□□ -1.05
COPB2-204ENST00000504295 DEKP35659 375 aaKnown RBP8.5□□□□□ -1.05
COPB2-204ENST00000504295 MST1RQ04912 1400 aa8.5□□□□□ -1.05
COPB2-204ENST00000504295 C5P01031 1676 aa8.49□□□□□ -1.05
COPB2-204ENST00000504295 PKD1L3Q7Z443 1732 aa8.49□□□□□ -1.05
COPB2-204ENST00000504295 CASZ1Q86V15 1759 aa8.49□□□□□ -1.05
COPB2-204ENST00000504295 PDE3AQ14432 1141 aa8.49□□□□□ -1.05
COPB2-204ENST00000504295 FAM9BQ8IZU0 186 aa8.49□□□□□ -1.05
COPB2-204ENST00000504295 ADGRF5Q8IZF2 1346 aa8.49□□□□□ -1.05
COPB2-204ENST00000504295 CLEC17AQ6ZS10 378 aa8.49□□□□□ -1.05
COPB2-204ENST00000504295 ESF1Q9H501 851 aaKnown RBP8.49□□□□□ -1.05
COPB2-204ENST00000504295 MRC1P22897 1456 aa8.49□□□□□ -1.05
COPB2-204ENST00000504295 KIF24Q5T7B8 1368 aa8.49□□□□□ -1.05
COPB2-204ENST00000504295 CICQ96RK0 1608 aaPredicted RBP8.49□□□□□ -1.05
COPB2-204ENST00000504295 NSD3Q9BZ95 1437 aa8.49□□□□□ -1.05
COPB2-204ENST00000504295 COL18A1P39060 1754 aa8.48□□□□□ -1.05
COPB2-204ENST00000504295 CRBNQ96SW2 442 aa8.48□□□□□ -1.05
COPB2-204ENST00000504295 ECM29Q5VYK3 1845 aa8.48□□□□□ -1.05
COPB2-204ENST00000504295 OVOS2A0A0J9YW53 1432 aa8.48□□□□□ -1.05
COPB2-204ENST00000504295 OVOS2Q6IE36 1432 aa8.48□□□□□ -1.05
COPB2-204ENST00000504295 AATKQ6ZMQ8 1374 aa8.48□□□□□ -1.05
COPB2-204ENST00000504295 LAMA4Q16363 1823 aa8.48□□□□□ -1.05
COPB2-204ENST00000504295 IL16Q14005 1332 aa8.48□□□□□ -1.05
COPB2-204ENST00000504295 AEBP2Q6ZN18 517 aaPredicted RBP8.47□□□□□ -1.05
COPB2-204ENST00000504295 FER1L4A9Z1Z3 1794 aa8.47□□□□□ -1.05
COPB2-204ENST00000504295 ATP10DQ9P241 1426 aa8.47□□□□□ -1.05
COPB2-204ENST00000504295 SCN11AQ9UI33 1791 aa8.46□□□□□ -1.05
COPB2-204ENST00000504295 TMF1P82094 1093 aa8.46□□□□□ -1.05
COPB2-204ENST00000504295 TJP1Q07157 1748 aa8.46□□□□□ -1.05
COPB2-204ENST00000504295 CGNL1Q0VF96 1302 aa8.46□□□□□ -1.05
COPB2-204ENST00000504295 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.46□□□□□ -1.06
COPB2-204ENST00000504295 PXDNLA1KZ92 1463 aa8.45□□□□□ -1.06
COPB2-204ENST00000504295 WNK3Q9BYP7 1800 aa8.45□□□□□ -1.06
COPB2-204ENST00000504295 NFAT5O94916 1531 aa8.45□□□□□ -1.06
COPB2-204ENST00000504295 A0A1W2PP64 1363 aa8.45□□□□□ -1.06
COPB2-204ENST00000504295 CT47B1P0C2W7 299 aaPredicted RBP8.44□□□□□ -1.06
COPB2-204ENST00000504295 WDR63Q8IWG1 891 aa8.44□□□□□ -1.06
COPB2-204ENST00000504295 CENPJQ9HC77 1338 aaPredicted RBP8.44□□□□□ -1.06
COPB2-204ENST00000504295 ABCA3Q99758 1704 aa8.44□□□□□ -1.06
COPB2-204ENST00000504295 A0A1B0GUL6 1792 aa8.44□□□□□ -1.06
COPB2-204ENST00000504295 IGHDP01880 384 aa8.44□□□□□ -1.06
COPB2-204ENST00000504295 RIMS2Q9UQ26 1411 aa8.43□□□□□ -1.06
COPB2-204ENST00000504295 WWC1Q8IX03 1113 aa8.42□□□□□ -1.06
COPB2-204ENST00000504295 KIF16BQ96L93 1317 aa8.42□□□□□ -1.06
COPB2-204ENST00000504295 FAM161AQ3B820 660 aa8.42□□□□□ -1.06
COPB2-204ENST00000504295 KIF2CQ99661 725 aa8.42□□□□□ -1.06
COPB2-204ENST00000504295 XIRP1Q702N8 1843 aaKnown RBP8.42□□□□□ -1.06
COPB2-204ENST00000504295 TBC1D32Q96NH3 1257 aa8.42□□□□□ -1.06
COPB2-204ENST00000504295 E9PSI1 815 aa8.41□□□□□ -1.06
COPB2-204ENST00000504295 HDAC1Q13547 482 aaPredicted RBP8.41□□□□□ -1.06
COPB2-204ENST00000504295 RTL1A6NKG5 1358 aa8.41□□□□□ -1.06
COPB2-204ENST00000504295 USP31Q70CQ4 1352 aa8.41□□□□□ -1.06
COPB2-204ENST00000504295 ZNF853P0CG23 659 aa8.41□□□□□ -1.06
COPB2-204ENST00000504295 ARAP2Q8WZ64 1704 aa8.41□□□□□ -1.06
COPB2-204ENST00000504295 KDM4FA0A1W2PPD8 638 aa8.4□□□□□ -1.06
COPB2-204ENST00000504295 KIF3BO15066 747 aa8.4□□□□□ -1.06
COPB2-204ENST00000504295 RARSP54136 660 aaKnown RBP8.4□□□□□ -1.06
COPB2-204ENST00000504295 TMC1Q8TDI8 760 aa8.4□□□□□ -1.06
COPB2-204ENST00000504295 TRIM35Q9UPQ4 493 aa8.4□□□□□ -1.06
COPB2-204ENST00000504295 SLIT3O75094 1523 aa8.4□□□□□ -1.06
COPB2-204ENST00000504295 MLECQ14165 292 aa8.4□□□□□ -1.06
COPB2-204ENST00000504295 ADAMTS13Q76LX8 1427 aa8.39□□□□□ -1.07
COPB2-204ENST00000504295 KIF1AQ12756 1690 aa8.39□□□□□ -1.07
COPB2-204ENST00000504295 PTPRUQ92729 1446 aa8.39□□□□□ -1.07
COPB2-204ENST00000504295 CCDC136Q96JN2 1154 aa8.39□□□□□ -1.07
COPB2-204ENST00000504295 RREB1Q92766 1687 aa8.38□□□□□ -1.07
COPB2-204ENST00000504295 EDC4Q6P2E9 1401 aaKnown RBP8.38□□□□□ -1.07
COPB2-204ENST00000504295 RBM25P49756 843 aaKnown RBP8.38□□□□□ -1.07
COPB2-204ENST00000504295 GOLGA2Q08379 1002 aa8.38□□□□□ -1.07
COPB2-204ENST00000504295 GGT6Q6P531 493 aa8.38□□□□□ -1.07
COPB2-204ENST00000504295 SMC5Q8IY18 1101 aa8.38□□□□□ -1.07
COPB2-204ENST00000504295 SEC24BO95487 1268 aa8.38□□□□□ -1.07
COPB2-204ENST00000504295 RLBP1P12271 317 aa8.38□□□□□ -1.07
COPB2-204ENST00000504295 SIRT1Q96EB6 747 aa8.38□□□□□ -1.07
COPB2-204ENST00000504295 KIAA0232Q92628 1395 aa8.37□□□□□ -1.07
COPB2-204ENST00000504295 ARFGEF2Q9Y6D5 1785 aa8.37□□□□□ -1.07
COPB2-204ENST00000504295 CDCA8Q53HL2 280 aa8.37□□□□□ -1.07
COPB2-204ENST00000504295 CRB1P82279 1406 aa8.37□□□□□ -1.07
COPB2-204ENST00000504295 RGPD5Q99666 1765 aa8.37□□□□□ -1.07
COPB2-204ENST00000504295 ABCC4O15439 1325 aa8.37□□□□□ -1.07
COPB2-204ENST00000504295 SPEF2Q9C093 1822 aa8.36□□□□□ -1.07
COPB2-204ENST00000504295 SKAP1Q86WV1 359 aa8.36□□□□□ -1.07
COPB2-204ENST00000504295 ARHGEF10O15013 1369 aa8.36□□□□□ -1.07
COPB2-204ENST00000504295 MAPK8IP3Q9UPT6 1336 aa8.36□□□□□ -1.07
COPB2-204ENST00000504295 NFKBIBQ15653 356 aa8.36□□□□□ -1.07
COPB2-204ENST00000504295 SALL3Q9BXA9 1300 aa8.36□□□□□ -1.07
COPB2-204ENST00000504295 PCDHB15Q9Y5E8 787 aa8.36□□□□□ -1.07
COPB2-204ENST00000504295 KDRP35968 1356 aa8.35□□□□□ -1.07
COPB2-204ENST00000504295 CYP2E1P05181 493 aaPredicted RBP8.35□□□□□ -1.07
COPB2-204ENST00000504295 KIAA1551Q9HCM1 1747 aa8.35□□□□□ -1.07
COPB2-204ENST00000504295 PPM1GO15355 546 aaPredicted RBP8.34□□□□□ -1.07
COPB2-204ENST00000504295 PLIN1O60240 522 aa8.34□□□□□ -1.07
COPB2-204ENST00000504295 SNX21Q969T3 373 aa8.34□□□□□ -1.07
COPB2-204ENST00000504295 DDRGK1Q96HY6 314 aa8.34□□□□□ -1.07
COPB2-204ENST00000504295 STRCP1A6NGW2 1772 aa8.34□□□□□ -1.07
COPB2-204ENST00000504295 SETD1BQ9UPS6 1966 aaKnown RBP8.34□□□□□ -1.07
COPB2-204ENST00000504295 ATAD2Q6PL18 1390 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms