RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 CT47B1P0C2W7 299 aaPredicted RBP12.81□□□□□ -0.36
COL1A1-210ENST00000504289 CCDC146Q8IYE0 955 aa12.81□□□□□ -0.36
COL1A1-210ENST00000504289 TCP11L2Q8N4U5 519 aa12.81□□□□□ -0.36
COL1A1-210ENST00000504289 AKAP12Q02952 1782 aa12.8□□□□□ -0.36
COL1A1-210ENST00000504289 TNNT2P45379 298 aaPredicted RBP12.8□□□□□ -0.36
COL1A1-210ENST00000504289 CEBPAP49715 358 aaPredicted RBP12.8□□□□□ -0.36
COL1A1-210ENST00000504289 B4GALNT3Q6L9W6 998 aa12.8□□□□□ -0.36
COL1A1-210ENST00000504289 SETD1BQ9UPS6 1966 aaKnown RBP12.8□□□□□ -0.36
COL1A1-210ENST00000504289 DIAPH1O60610 1272 aaKnown RBP12.79□□□□□ -0.36
COL1A1-210ENST00000504289 FCHSD2O94868 740 aa12.79□□□□□ -0.36
COL1A1-210ENST00000504289 U2AF1L5P0DN76 240 aaPredicted RBP12.79□□□□□ -0.36
COL1A1-210ENST00000504289 U2AF1Q01081 240 aaKnown RBP eCLIP12.79□□□□□ -0.36
COL1A1-210ENST00000504289 AAMPQ13685 434 aa12.79□□□□□ -0.36
COL1A1-210ENST00000504289 IL16Q14005 1332 aa12.79□□□□□ -0.36
COL1A1-210ENST00000504289 CEP170BQ9Y4F5 1589 aaPredicted RBP12.78□□□□□ -0.36
COL1A1-210ENST00000504289 TOPAZ1Q8N9V7 1692 aa12.78□□□□□ -0.36
COL1A1-210ENST00000504289 MYH16Q9H6N6 1097 aa12.78□□□□□ -0.36
COL1A1-210ENST00000504289 ITSN1Q15811 1721 aa12.78□□□□□ -0.36
COL1A1-210ENST00000504289 CDK12Q9NYV4 1490 aaPredicted RBP12.78□□□□□ -0.36
COL1A1-210ENST00000504289 ZNF142P52746 1687 aaPredicted RBP12.77□□□□□ -0.36
COL1A1-210ENST00000504289 COG3Q96JB2 828 aa12.77□□□□□ -0.37
COL1A1-210ENST00000504289 PLEKHF1Q96S99 279 aa12.77□□□□□ -0.37
COL1A1-210ENST00000504289 AMOTL2Q9Y2J4 779 aa12.77□□□□□ -0.37
COL1A1-210ENST00000504289 ANKARQ7Z5J8 1434 aa12.77□□□□□ -0.37
COL1A1-210ENST00000504289 PTPRUQ92729 1446 aa12.77□□□□□ -0.37
COL1A1-210ENST00000504289 ADAMTSL3P82987 1691 aa12.77□□□□□ -0.37
COL1A1-210ENST00000504289 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.76□□□□□ -0.37
COL1A1-210ENST00000504289 SENP3-EIF4A1A0A087X0R7 540 aa12.76□□□□□ -0.37
COL1A1-210ENST00000504289 PDE3AQ14432 1141 aa12.76□□□□□ -0.37
COL1A1-210ENST00000504289 POLKQ9UBT6 870 aa12.76□□□□□ -0.37
COL1A1-210ENST00000504289 XRN1Q8IZH2 1706 aaKnown RBP12.76□□□□□ -0.37
COL1A1-210ENST00000504289 NEFMP07197 916 aa12.75□□□□□ -0.37
COL1A1-210ENST00000504289 TTC21AQ8NDW8 1320 aa12.75□□□□□ -0.37
COL1A1-210ENST00000504289 EXOC6Q8TAG9 804 aa12.75□□□□□ -0.37
COL1A1-210ENST00000504289 SENP3Q9H4L4 574 aaPredicted RBP12.75□□□□□ -0.37
COL1A1-210ENST00000504289 MAPK8IP3Q9UPT6 1336 aa12.75□□□□□ -0.37
COL1A1-210ENST00000504289 RIMS1Q86UR5 1692 aaKnown RBP12.74□□□□□ -0.37
COL1A1-210ENST00000504289 PRR36Q9H6K5 1346 aa12.74□□□□□ -0.37
COL1A1-210ENST00000504289 TMPOP42166 694 aaKnown RBP12.73□□□□□ -0.37
COL1A1-210ENST00000504289 ANKLE2Q86XL3 938 aa12.73□□□□□ -0.37
COL1A1-210ENST00000504289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.73□□□□□ -0.37
COL1A1-210ENST00000504289 SLC26A8Q96RN1 970 aa12.73□□□□□ -0.37
COL1A1-210ENST00000504289 SPINK5Q9NQ38 1064 aaPredicted RBP12.73□□□□□ -0.37
COL1A1-210ENST00000504289 RBM19Q9Y4C8 960 aaKnown RBP12.73□□□□□ -0.37
COL1A1-210ENST00000504289 NRKQ7Z2Y5 1582 aa12.73□□□□□ -0.37
COL1A1-210ENST00000504289 USP6P35125 1406 aa12.72□□□□□ -0.37
COL1A1-210ENST00000504289 SSH2Q76I76 1423 aa12.72□□□□□ -0.37
COL1A1-210ENST00000504289 MAP2P11137 1827 aaKnown RBP12.72□□□□□ -0.37
COL1A1-210ENST00000504289 TTC21BQ7Z4L5 1316 aa12.72□□□□□ -0.37
COL1A1-210ENST00000504289 U2SURPO15042 1029 aaKnown RBP12.72□□□□□ -0.37
COL1A1-210ENST00000504289 CALD1Q05682 793 aaKnown RBP12.72□□□□□ -0.37
COL1A1-210ENST00000504289 FBXO41Q8TF61 875 aa12.72□□□□□ -0.37
COL1A1-210ENST00000504289 USP31Q70CQ4 1352 aa12.71□□□□□ -0.37
COL1A1-210ENST00000504289 ACEP12821 1306 aa12.71□□□□□ -0.37
COL1A1-210ENST00000504289 MS4A1P11836 297 aa12.71□□□□□ -0.37
COL1A1-210ENST00000504289 ZNF428Q96B54 188 aa12.71□□□□□ -0.37
COL1A1-210ENST00000504289 LRRC7Q96NW7 1537 aa12.71□□□□□ -0.38
COL1A1-210ENST00000504289 OVOS2A0A0J9YW53 1432 aa12.71□□□□□ -0.38
COL1A1-210ENST00000504289 OVOS2Q6IE36 1432 aa12.71□□□□□ -0.38
COL1A1-210ENST00000504289 TCERG1O14776 1098 aaKnown RBP12.7□□□□□ -0.38
COL1A1-210ENST00000504289 NME9Q86XW9 330 aa12.7□□□□□ -0.38
COL1A1-210ENST00000504289 CRBNQ96SW2 442 aa12.7□□□□□ -0.38
COL1A1-210ENST00000504289 FANCIQ9NVI1 1328 aa12.69□□□□□ -0.38
COL1A1-210ENST00000504289 IL13P35225 146 aa12.69□□□□□ -0.38
COL1A1-210ENST00000504289 LMOD3Q0VAK6 560 aa12.69□□□□□ -0.38
COL1A1-210ENST00000504289 RSPH6AQ9H0K4 717 aa12.69□□□□□ -0.38
COL1A1-210ENST00000504289 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
COL1A1-210ENST00000504289 KIF24Q5T7B8 1368 aa12.69□□□□□ -0.38
COL1A1-210ENST00000504289 NALCNQ8IZF0 1738 aa12.68□□□□□ -0.38
COL1A1-210ENST00000504289 PLIN1O60240 522 aa12.68□□□□□ -0.38
COL1A1-210ENST00000504289 RARSP54136 660 aaKnown RBP12.68□□□□□ -0.38
COL1A1-210ENST00000504289 CENPQQ7L2Z9 268 aaPredicted RBP12.68□□□□□ -0.38
COL1A1-210ENST00000504289 TRIM35Q9UPQ4 493 aa12.68□□□□□ -0.38
COL1A1-210ENST00000504289 CHD2O14647 1828 aaKnown RBP12.67□□□□□ -0.38
COL1A1-210ENST00000504289 NEUROD2Q15784 382 aa12.67□□□□□ -0.38
COL1A1-210ENST00000504289 RRP7AQ9Y3A4 280 aaKnown RBP12.67□□□□□ -0.38
COL1A1-210ENST00000504289 RIPK4P57078 832 aa12.66□□□□□ -0.38
COL1A1-210ENST00000504289 NFE2L2Q16236 605 aa12.66□□□□□ -0.38
COL1A1-210ENST00000504289 FMN2Q9NZ56 1722 aa12.65□□□□□ -0.38
COL1A1-210ENST00000504289 USP54Q70EL1 1684 aa12.65□□□□□ -0.38
COL1A1-210ENST00000504289 KDM2BQ8NHM5 1336 aa12.64□□□□□ -0.39
COL1A1-210ENST00000504289 BCAR3O75815 825 aa12.64□□□□□ -0.39
COL1A1-210ENST00000504289 KCNA6P17658 529 aa12.64□□□□□ -0.39
COL1A1-210ENST00000504289 PRKAR2BP31323 418 aa12.64□□□□□ -0.39
COL1A1-210ENST00000504289 BRPF1P55201 1214 aaPredicted RBP12.64□□□□□ -0.39
COL1A1-210ENST00000504289 EMILIN1Q9Y6C2 1016 aa12.64□□□□□ -0.39
COL1A1-210ENST00000504289 LMTK3Q96Q04 1460 aa12.64□□□□□ -0.39
COL1A1-210ENST00000504289 NCKAP5LQ9HCH0 1330 aa12.63□□□□□ -0.39
COL1A1-210ENST00000504289 ALDH1L2Q3SY69 923 aa12.63□□□□□ -0.39
COL1A1-210ENST00000504289 C20orf194Q5TEA3 1177 aa12.63□□□□□ -0.39
COL1A1-210ENST00000504289 NGDNQ8NEJ9 315 aaKnown RBP12.63□□□□□ -0.39
COL1A1-210ENST00000504289 NPHP4O75161 1426 aaPredicted RBP12.62□□□□□ -0.39
COL1A1-210ENST00000504289 PPM1GO15355 546 aaPredicted RBP12.62□□□□□ -0.39
COL1A1-210ENST00000504289 CANXP27824 592 aaKnown RBP12.62□□□□□ -0.39
COL1A1-210ENST00000504289 HAP1P54257 671 aaPredicted RBP12.62□□□□□ -0.39
COL1A1-210ENST00000504289 GNAI1P63096 354 aa12.62□□□□□ -0.39
COL1A1-210ENST00000504289 PLPPR3Q6T4P5 718 aa12.62□□□□□ -0.39
COL1A1-210ENST00000504289 IFT57Q9NWB7 429 aa12.62□□□□□ -0.39
COL1A1-210ENST00000504289 ADGRL3Q9HAR2 1447 aa12.62□□□□□ -0.39
COL1A1-210ENST00000504289 SBNO1A3KN83 1393 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms