RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 DSG2Q14126 1118 aa5.93□□□□□ -1.46
USP46-205ENST00000504078 ANKK1Q8NFD2 765 aa5.93□□□□□ -1.46
USP46-205ENST00000504078 OXER1Q8TDS5 423 aa5.93□□□□□ -1.46
USP46-205ENST00000504078 WASHC2CQ9Y4E1 1318 aa5.93□□□□□ -1.46
USP46-205ENST00000504078 CFAP65Q6ZU64 1925 aaKnown RBP5.92□□□□□ -1.46
USP46-205ENST00000504078 LCE2BO14633 110 aa5.92□□□□□ -1.46
USP46-205ENST00000504078 ECM2O94769 699 aaPredicted RBP5.92□□□□□ -1.46
USP46-205ENST00000504078 TRIM52Q96A61 297 aa5.91□□□□□ -1.46
USP46-205ENST00000504078 COL16A1Q07092 1604 aaPredicted RBP5.91□□□□□ -1.46
USP46-205ENST00000504078 EIF2AK4Q9P2K8 1649 aaKnown RBP5.91□□□□□ -1.46
USP46-205ENST00000504078 TMEM94Q12767 1356 aa5.91□□□□□ -1.46
USP46-205ENST00000504078 RTEL1-TNFRSF6BF6WH68 1400 aa5.91□□□□□ -1.46
USP46-205ENST00000504078 CEP162Q5TB80 1403 aa5.91□□□□□ -1.46
USP46-205ENST00000504078 ARHGEF5Q12774 1597 aa5.9□□□□□ -1.46
USP46-205ENST00000504078 THEMISQ8N1K5 641 aaPredicted RBP5.9□□□□□ -1.46
USP46-205ENST00000504078 RABGEF1Q9UJ41 708 aa5.9□□□□□ -1.46
USP46-205ENST00000504078 ARHGAP23Q9P227 1491 aa5.9□□□□□ -1.47
USP46-205ENST00000504078 SLIT1O75093 1534 aa5.89□□□□□ -1.47
USP46-205ENST00000504078 NWD1Q149M9 1564 aa5.89□□□□□ -1.47
USP46-205ENST00000504078 LTKP29376 864 aa5.89□□□□□ -1.47
USP46-205ENST00000504078 LAPTM4BQ86VI4 370 aa5.89□□□□□ -1.47
USP46-205ENST00000504078 ZDHHC16Q969W1 377 aa5.89□□□□□ -1.47
USP46-205ENST00000504078 ANO8Q9HCE9 1232 aaPredicted RBP5.89□□□□□ -1.47
USP46-205ENST00000504078 PRDM15P57071 1507 aaPredicted RBP5.89□□□□□ -1.47
USP46-205ENST00000504078 MAST1Q9Y2H9 1570 aa5.89□□□□□ -1.47
USP46-205ENST00000504078 CROCC2H7BZ55 1655 aa5.88□□□□□ -1.47
USP46-205ENST00000504078 KDM5AP29375 1690 aaKnown RBP5.88□□□□□ -1.47
USP46-205ENST00000504078 SOWAHBA6NEL2 793 aa5.88□□□□□ -1.47
USP46-205ENST00000504078 NRG2O14511 850 aaPredicted RBP5.88□□□□□ -1.47
USP46-205ENST00000504078 ZNF787Q6DD87 383 aa5.88□□□□□ -1.47
USP46-205ENST00000504078 LRRC9Q6ZRR7 1453 aa5.88□□□□□ -1.47
USP46-205ENST00000504078 ADGRB3O60242 1522 aa5.88□□□□□ -1.47
USP46-205ENST00000504078 EFCAB6Q5THR3 1501 aa5.88□□□□□ -1.47
USP46-205ENST00000504078 MEX3CQ5U5Q3 659 aaKnown RBP5.87□□□□□ -1.47
USP46-205ENST00000504078 TXNDC2Q86VQ3 553 aa5.87□□□□□ -1.47
USP46-205ENST00000504078 SLC26A8Q96RN1 970 aa5.87□□□□□ -1.47
USP46-205ENST00000504078 FAM135BQ49AJ0 1406 aa5.87□□□□□ -1.47
USP46-205ENST00000504078 GCC2Q8IWJ2 1684 aa5.87□□□□□ -1.47
USP46-205ENST00000504078 MYO5BQ9ULV0 1848 aa5.87□□□□□ -1.47
USP46-205ENST00000504078 NKTRP30414 1462 aaKnown RBP5.86□□□□□ -1.47
USP46-205ENST00000504078 SHPRHQ149N8 1683 aa5.85□□□□□ -1.47
USP46-205ENST00000504078 DUOX2Q9NRD8 1548 aa5.85□□□□□ -1.47
USP46-205ENST00000504078 RGS12O14924 1447 aa5.85□□□□□ -1.47
USP46-205ENST00000504078 MSH6P52701 1360 aa5.85□□□□□ -1.47
USP46-205ENST00000504078 JCADQ9P266 1359 aa5.85□□□□□ -1.47
USP46-205ENST00000504078 TMEM2Q9UHN6 1383 aa5.85□□□□□ -1.47
USP46-205ENST00000504078 PPP1R3GB7ZBB8 358 aa5.85□□□□□ -1.47
USP46-205ENST00000504078 BCAMP50895 628 aa5.85□□□□□ -1.47
USP46-205ENST00000504078 PROSER2Q86WR7 435 aaPredicted RBP5.85□□□□□ -1.47
USP46-205ENST00000504078 UPF1Q92900 1129 aaKnown RBP eCLIP5.85□□□□□ -1.47
USP46-205ENST00000504078 ADAM33Q9BZ11 813 aa5.85□□□□□ -1.47
USP46-205ENST00000504078 KIF15Q9NS87 1388 aa5.84□□□□□ -1.47
USP46-205ENST00000504078 NUTM2BA6NNL0 878 aaPredicted RBP5.84□□□□□ -1.47
USP46-205ENST00000504078 NUTM2EB1AL46 878 aaPredicted RBP5.84□□□□□ -1.47
USP46-205ENST00000504078 NUTM2AQ8IVF1 878 aaPredicted RBP5.84□□□□□ -1.47
USP46-205ENST00000504078 BCANQ96GW7 911 aa5.84□□□□□ -1.47
USP46-205ENST00000504078 TET3O43151 1660 aa5.84□□□□□ -1.47
USP46-205ENST00000504078 AHDC1Q5TGY3 1603 aaPredicted RBP5.84□□□□□ -1.47
USP46-205ENST00000504078 DIP2AQ14689 1571 aa5.84□□□□□ -1.48
USP46-205ENST00000504078 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.83□□□□□ -1.48
USP46-205ENST00000504078 ONECUT3O60422 494 aaPredicted RBP5.83□□□□□ -1.48
USP46-205ENST00000504078 ZNF775Q96BV0 537 aaPredicted RBP5.83□□□□□ -1.48
USP46-205ENST00000504078 ZFRQ96KR1 1074 aaKnown RBP5.83□□□□□ -1.48
USP46-205ENST00000504078 WBP1LQ9NX94 342 aa5.83□□□□□ -1.48
USP46-205ENST00000504078 EID1Q9Y6B2 187 aa5.83□□□□□ -1.48
USP46-205ENST00000504078 SETBP1Q9Y6X0 1596 aa5.83□□□□□ -1.48
USP46-205ENST00000504078 RGL2O15211 777 aa5.82□□□□□ -1.48
USP46-205ENST00000504078 TSPY4P0CV99 314 aa5.82□□□□□ -1.48
USP46-205ENST00000504078 TSPY10P0CW01 314 aa5.82□□□□□ -1.48
USP46-205ENST00000504078 C14orf37Q86TY3 774 aa5.82□□□□□ -1.48
USP46-205ENST00000504078 PRKD2Q9BZL6 878 aa5.82□□□□□ -1.48
USP46-205ENST00000504078 V9GY48 417 aaPredicted RBP5.82□□□□□ -1.48
USP46-205ENST00000504078 PTPN23Q9H3S7 1636 aa5.81□□□□□ -1.48
USP46-205ENST00000504078 CHD2O14647 1828 aaKnown RBP5.81□□□□□ -1.48
USP46-205ENST00000504078 ASXL1Q8IXJ9 1541 aa5.81□□□□□ -1.48
USP46-205ENST00000504078 EVI5O60447 810 aa5.81□□□□□ -1.48
USP46-205ENST00000504078 NUTM2DQ5VT03 806 aaPredicted RBP5.81□□□□□ -1.48
USP46-205ENST00000504078 RRP7BPQ9NSQ0 103 aa5.81□□□□□ -1.48
USP46-205ENST00000504078 TSR3Q9UJK0 312 aaKnown RBP5.81□□□□□ -1.48
USP46-205ENST00000504078 ARHGAP31Q2M1Z3 1444 aa5.81□□□□□ -1.48
USP46-205ENST00000504078 MYOM3Q5VTT5 1437 aa5.81□□□□□ -1.48
USP46-205ENST00000504078 ERBINQ96RT1 1412 aa5.81□□□□□ -1.48
USP46-205ENST00000504078 AFF2P51816 1311 aa5.8□□□□□ -1.48
USP46-205ENST00000504078 KCNA6P17658 529 aa5.8□□□□□ -1.48
USP46-205ENST00000504078 PROX2Q3B8N5 592 aa5.8□□□□□ -1.48
USP46-205ENST00000504078 NHSL1Q5SYE7 1610 aa5.8□□□□□ -1.48
USP46-205ENST00000504078 ABCC5O15440 1437 aa5.8□□□□□ -1.48
USP46-205ENST00000504078 RIMS2Q9UQ26 1411 aa5.8□□□□□ -1.48
USP46-205ENST00000504078 TMEM131LA2VDJ0 1609 aa5.79□□□□□ -1.48
USP46-205ENST00000504078 PPP1R15AO75807 674 aaPredicted RBP5.79□□□□□ -1.48
USP46-205ENST00000504078 IDI1Q13907 227 aa5.79□□□□□ -1.48
USP46-205ENST00000504078 PPP1R15BQ5SWA1 713 aa5.79□□□□□ -1.48
USP46-205ENST00000504078 DDX17Q92841 729 aaKnown RBP5.79□□□□□ -1.48
USP46-205ENST00000504078 C8orf37Q96NL8 207 aa5.79□□□□□ -1.48
USP46-205ENST00000504078 SLAIN2Q9P270 581 aa5.79□□□□□ -1.48
USP46-205ENST00000504078 ZFYVE9O95405 1425 aa5.79□□□□□ -1.48
USP46-205ENST00000504078 DAPK1P53355 1430 aa5.79□□□□□ -1.48
USP46-205ENST00000504078 FGD6Q6ZV73 1430 aa5.79□□□□□ -1.48
USP46-205ENST00000504078 NALCNQ8IZF0 1738 aa5.79□□□□□ -1.48
USP46-205ENST00000504078 LMTK2Q8IWU2 1503 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms