RNA–Protein interactions for RNA: ENST00000503942.1

UBE3D-205, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 3

Gene UBE3D, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-205ENST00000503942 NDUFV2P19404 249 aa10.66□□□□□ -0.7
UBE3D-205ENST00000503942 SSTR3P32745 418 aaPredicted RBP10.66□□□□□ -0.7
UBE3D-205ENST00000503942 SPDYE5A6NIY4 337 aa10.65□□□□□ -0.7
UBE3D-205ENST00000503942 ADH1CP00326 375 aa10.65□□□□□ -0.7
UBE3D-205ENST00000503942 TIMP2P16035 220 aa10.65□□□□□ -0.7
UBE3D-205ENST00000503942 MTMR2Q13614 643 aa10.64□□□□□ -0.71
UBE3D-205ENST00000503942 SCARF1Q14162 830 aa10.64□□□□□ -0.71
UBE3D-205ENST00000503942 WDR4P57081 412 aaKnown RBP10.63□□□□□ -0.71
UBE3D-205ENST00000503942 PURBQ96QR8 312 aaKnown RBP10.63□□□□□ -0.71
UBE3D-205ENST00000503942 KLF16Q9BXK1 252 aaPredicted RBP10.63□□□□□ -0.71
UBE3D-205ENST00000503942 VSIG8P0DPA2 414 aa10.62□□□□□ -0.71
UBE3D-205ENST00000503942 FAM174AQ8TBP5 190 aa10.6□□□□□ -0.71
UBE3D-205ENST00000503942 TTLL12Q14166 644 aaPredicted RBP10.59□□□□□ -0.71
UBE3D-205ENST00000503942 SOBPA7XYQ1 873 aa10.58□□□□□ -0.72
UBE3D-205ENST00000503942 GJA5P36382 358 aa10.58□□□□□ -0.72
UBE3D-205ENST00000503942 AMHR2Q16671 573 aa10.58□□□□□ -0.72
UBE3D-205ENST00000503942 LYPD8Q6UX82 237 aa10.58□□□□□ -0.72
UBE3D-205ENST00000503942 CDK15Q96Q40 435 aa10.58□□□□□ -0.72
UBE3D-205ENST00000503942 CTHP32929 405 aa10.56□□□□□ -0.72
UBE3D-205ENST00000503942 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
UBE3D-205ENST00000503942 LOC100996750A0A140TA64 210 aa10.55□□□□□ -0.72
UBE3D-205ENST00000503942 GIGYF2Q6Y7W6 1299 aaKnown RBP10.55□□□□□ -0.72
UBE3D-205ENST00000503942 FOXJ1Q92949 421 aa10.55□□□□□ -0.72
UBE3D-205ENST00000503942 KRTAP4-6Q9BYQ5 205 aa10.55□□□□□ -0.72
UBE3D-205ENST00000503942 CFAP99D6REC4 459 aa10.54□□□□□ -0.72
UBE3D-205ENST00000503942 ZIC2O95409 532 aaPredicted RBP10.54□□□□□ -0.72
UBE3D-205ENST00000503942 F12P00748 615 aaPredicted RBP10.54□□□□□ -0.72
UBE3D-205ENST00000503942 RSBN1LQ6PCB5 846 aaPredicted RBP10.54□□□□□ -0.72
UBE3D-205ENST00000503942 BEGAINQ9BUH8 593 aa10.54□□□□□ -0.72
UBE3D-205ENST00000503942 ZFAND3Q9H8U3 227 aa10.54□□□□□ -0.72
UBE3D-205ENST00000503942 ITPKCQ96DU7 683 aa10.53□□□□□ -0.72
UBE3D-205ENST00000503942 TBC1D2Q9BYX2 928 aa10.53□□□□□ -0.72
UBE3D-205ENST00000503942 MAP10Q9P2G4 905 aa10.53□□□□□ -0.72
UBE3D-205ENST00000503942 MAN1A2O60476 641 aa10.52□□□□□ -0.73
UBE3D-205ENST00000503942 NR3C2P08235 984 aa10.52□□□□□ -0.73
UBE3D-205ENST00000503942 NR5A1Q13285 461 aa10.52□□□□□ -0.73
UBE3D-205ENST00000503942 ARID5BQ14865 1188 aa10.52□□□□□ -0.73
UBE3D-205ENST00000503942 BARGINQ6ZT62 677 aa10.52□□□□□ -0.73
UBE3D-205ENST00000503942 DIXDC1Q155Q3 683 aa10.51□□□□□ -0.73
UBE3D-205ENST00000503942 PCDHB15Q9Y5E8 787 aa10.51□□□□□ -0.73
UBE3D-205ENST00000503942 C4orf48Q5BLP8 95 aa10.5□□□□□ -0.73
UBE3D-205ENST00000503942 C6orf118Q5T5N4 469 aa10.5□□□□□ -0.73
UBE3D-205ENST00000503942 SPTLC1O15269 473 aa10.49□□□□□ -0.73
UBE3D-205ENST00000503942 GRM5P41594 1212 aa10.49□□□□□ -0.73
UBE3D-205ENST00000503942 ZBTB3Q9H5J0 574 aa10.49□□□□□ -0.73
UBE3D-205ENST00000503942 PPFIA3O75145 1194 aa10.48□□□□□ -0.73
UBE3D-205ENST00000503942 ZMYND10O75800 440 aa10.48□□□□□ -0.73
UBE3D-205ENST00000503942 HRCP23327 699 aa10.48□□□□□ -0.73
UBE3D-205ENST00000503942 MEIOBQ8N635 442 aa10.48□□□□□ -0.73
UBE3D-205ENST00000503942 BPHLQ86WA6 291 aaPredicted RBP10.47□□□□□ -0.73
UBE3D-205ENST00000503942 LINC00528Q8N1L1 170 aa10.47□□□□□ -0.73
UBE3D-205ENST00000503942 UPP2O95045 317 aa10.46□□□□□ -0.73
UBE3D-205ENST00000503942 BMP2P12643 396 aa10.46□□□□□ -0.73
UBE3D-205ENST00000503942 AGERQ15109 404 aa10.46□□□□□ -0.73
UBE3D-205ENST00000503942 PRPF38BQ5VTL8 546 aaKnown RBP10.46□□□□□ -0.73
UBE3D-205ENST00000503942 PARP9Q8IXQ6 854 aa10.45□□□□□ -0.74
UBE3D-205ENST00000503942 C1QTNF2Q9BXJ5 285 aa10.45□□□□□ -0.74
UBE3D-205ENST00000503942 SOS2Q07890 1332 aaPredicted RBP10.44□□□□□ -0.74
UBE3D-205ENST00000503942 KCNMA1Q12791 1236 aa10.44□□□□□ -0.74
UBE3D-205ENST00000503942 DNMT3LQ9UJW3 386 aa10.44□□□□□ -0.74
UBE3D-205ENST00000503942 PER1O15534 1290 aaPredicted RBP10.43□□□□□ -0.74
UBE3D-205ENST00000503942 GSK3AP49840 483 aa10.43□□□□□ -0.74
UBE3D-205ENST00000503942 CABLES1Q8TDN4 633 aa10.43□□□□□ -0.74
UBE3D-205ENST00000503942 MAP4K5Q9Y4K4 846 aa10.42□□□□□ -0.74
UBE3D-205ENST00000503942 FSHRP23945 695 aa10.41□□□□□ -0.74
UBE3D-205ENST00000503942 RIC3Q7Z5B4 369 aa10.41□□□□□ -0.74
UBE3D-205ENST00000503942 BCANQ96GW7 911 aa10.41□□□□□ -0.74
UBE3D-205ENST00000503942 SUZ12Q15022 739 aaKnown RBP10.4□□□□□ -0.74
UBE3D-205ENST00000503942 SH3RF1Q7Z6J0 888 aa10.4□□□□□ -0.74
UBE3D-205ENST00000503942 ZC3H15Q8WU90 426 aaKnown RBP10.4□□□□□ -0.74
UBE3D-205ENST00000503942 TRMT44Q8IYL2 757 aaKnown RBP10.39□□□□□ -0.75
UBE3D-205ENST00000503942 ARMC2Q8NEN0 867 aa10.39□□□□□ -0.75
UBE3D-205ENST00000503942 TSEN34Q9BSV6 310 aaKnown RBP10.39□□□□□ -0.75
UBE3D-205ENST00000503942 KRT76Q01546 638 aa10.38□□□□□ -0.75
UBE3D-205ENST00000503942 CSPP1Q1MSJ5 1256 aa10.38□□□□□ -0.75
UBE3D-205ENST00000503942 NBPF14Q5TI25 921 aa10.38□□□□□ -0.75
UBE3D-205ENST00000503942 SH3BP5LQ7L8J4 393 aa10.38□□□□□ -0.75
UBE3D-205ENST00000503942 VASH1Q7L8A9 365 aaPredicted RBP10.37□□□□□ -0.75
UBE3D-205ENST00000503942 EMILIN1Q9Y6C2 1016 aa10.37□□□□□ -0.75
UBE3D-205ENST00000503942 QPCTQ16769 361 aa10.36□□□□□ -0.75
UBE3D-205ENST00000503942 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.36□□□□□ -0.75
UBE3D-205ENST00000503942 KCTD17Q8N5Z5 321 aa10.36□□□□□ -0.75
UBE3D-205ENST00000503942 TRIM66O15016 1216 aa10.35□□□□□ -0.75
UBE3D-205ENST00000503942 CCDC116Q8IYX3 515 aa10.35□□□□□ -0.75
UBE3D-205ENST00000503942 GPR161Q8N6U8 529 aaKnown RBP10.35□□□□□ -0.75
UBE3D-205ENST00000503942 TSC1Q92574 1164 aa10.35□□□□□ -0.75
UBE3D-205ENST00000503942 LIMD1Q9UGP4 676 aa10.35□□□□□ -0.75
UBE3D-205ENST00000503942 TTLL8A6PVC2 850 aa10.34□□□□□ -0.75
UBE3D-205ENST00000503942 TUSC1Q2TAM9 212 aa10.34□□□□□ -0.75
UBE3D-205ENST00000503942 PTSQ03393 145 aa10.33□□□□□ -0.76
UBE3D-205ENST00000503942 MYSM1Q5VVJ2 828 aa10.33□□□□□ -0.76
UBE3D-205ENST00000503942 CNTNAP3BQ96NU0 1288 aa10.33□□□□□ -0.76
UBE3D-205ENST00000503942 CNTNAP3Q9BZ76 1288 aa10.33□□□□□ -0.76
UBE3D-205ENST00000503942 MAGEB6P1A0A0J9YX57 407 aa10.32□□□□□ -0.76
UBE3D-205ENST00000503942 NUTM2BA6NNL0 878 aaPredicted RBP10.32□□□□□ -0.76
UBE3D-205ENST00000503942 NUTM2EB1AL46 878 aaPredicted RBP10.32□□□□□ -0.76
UBE3D-205ENST00000503942 RNF225M0QZC1 329 aaPredicted RBP10.32□□□□□ -0.76
UBE3D-205ENST00000503942 LILRB3O75022 631 aa10.32□□□□□ -0.76
UBE3D-205ENST00000503942 NUTM2DQ5VT03 806 aaPredicted RBP10.32□□□□□ -0.76
UBE3D-205ENST00000503942 NUTM2AQ8IVF1 878 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms