RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 POLR3GLQ9BT43 218 aa15.46■□□□□ 0.07
VCAN-205ENST00000503923 ALS2Q96Q42 1657 aa15.46■□□□□ 0.07
VCAN-205ENST00000503923 KTN1Q86UP2 1357 aaKnown RBP15.46■□□□□ 0.07
VCAN-205ENST00000503923 MON2Q7Z3U7 1717 aa15.46■□□□□ 0.06
VCAN-205ENST00000503923 SSH2Q76I76 1423 aa15.45■□□□□ 0.06
VCAN-205ENST00000503923 C11orf95C9JLR9 678 aaPredicted RBP15.45■□□□□ 0.06
VCAN-205ENST00000503923 A0A1W2PP64 1363 aa15.45■□□□□ 0.06
VCAN-205ENST00000503923 ANKRD36BQ8N2N9 1353 aa15.45■□□□□ 0.06
VCAN-205ENST00000503923 MYOM1P52179 1685 aa15.44■□□□□ 0.06
VCAN-205ENST00000503923 ABTB2Q8N961 1025 aa15.43■□□□□ 0.06
VCAN-205ENST00000503923 NRKQ7Z2Y5 1582 aa15.43■□□□□ 0.06
VCAN-205ENST00000503923 KIF7Q2M1P5 1343 aa15.43■□□□□ 0.06
VCAN-205ENST00000503923 TTC21BQ7Z4L5 1316 aa15.43■□□□□ 0.06
VCAN-205ENST00000503923 TTC21AQ8NDW8 1320 aa15.43■□□□□ 0.06
VCAN-205ENST00000503923 NUTM2BA6NNL0 878 aaPredicted RBP15.42■□□□□ 0.06
VCAN-205ENST00000503923 NUTM2EB1AL46 878 aaPredicted RBP15.42■□□□□ 0.06
VCAN-205ENST00000503923 NUTM2AQ8IVF1 878 aaPredicted RBP15.42■□□□□ 0.06
VCAN-205ENST00000503923 EDC4Q6P2E9 1401 aaKnown RBP15.42■□□□□ 0.06
VCAN-205ENST00000503923 MED1Q15648 1581 aaPredicted RBP15.41■□□□□ 0.06
VCAN-205ENST00000503923 LRP6O75581 1613 aa15.4■□□□□ 0.06
VCAN-205ENST00000503923 CCDC7Q96M83 1385 aa15.39■□□□□ 0.05
VCAN-205ENST00000503923 HAP1P54257 671 aaPredicted RBP15.39■□□□□ 0.05
VCAN-205ENST00000503923 MEX3CQ5U5Q3 659 aaKnown RBP15.39■□□□□ 0.05
VCAN-205ENST00000503923 NUTM2GQ5VZR2 741 aa15.39■□□□□ 0.05
VCAN-205ENST00000503923 NLRP13Q86W25 1043 aa15.39■□□□□ 0.05
VCAN-205ENST00000503923 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.39■□□□□ 0.05
VCAN-205ENST00000503923 PIK3C2AO00443 1686 aa15.38■□□□□ 0.05
VCAN-205ENST00000503923 ABCA3Q99758 1704 aa15.38■□□□□ 0.05
VCAN-205ENST00000503923 PLEKHG5O94827 1062 aa15.38■□□□□ 0.05
VCAN-205ENST00000503923 CABLES1Q8TDN4 633 aa15.38■□□□□ 0.05
VCAN-205ENST00000503923 WASHC2AQ641Q2 1341 aa15.38■□□□□ 0.05
VCAN-205ENST00000503923 CRYBG1Q9Y4K1 1723 aa15.37■□□□□ 0.05
VCAN-205ENST00000503923 ADAMTS2O95450 1211 aa15.37■□□□□ 0.05
VCAN-205ENST00000503923 NLRP6P59044 892 aa15.37■□□□□ 0.05
VCAN-205ENST00000503923 PANK3Q9H999 370 aa15.36■□□□□ 0.05
VCAN-205ENST00000503923 USP19O94966 1318 aa15.36■□□□□ 0.05
VCAN-205ENST00000503923 USP31Q70CQ4 1352 aa15.36■□□□□ 0.05
VCAN-205ENST00000503923 PHRF1Q9P1Y6 1649 aaKnown RBP15.35■□□□□ 0.05
VCAN-205ENST00000503923 MARF1Q9Y4F3 1742 aaKnown RBP15.35■□□□□ 0.05
VCAN-205ENST00000503923 NME9Q86XW9 330 aa15.35■□□□□ 0.05
VCAN-205ENST00000503923 CARD14Q9BXL6 1004 aa15.35■□□□□ 0.05
VCAN-205ENST00000503923 NSD3Q9BZ95 1437 aa15.34■□□□□ 0.05
VCAN-205ENST00000503923 C8orf37Q96NL8 207 aa15.34■□□□□ 0.05
VCAN-205ENST00000503923 SLIT3O75094 1523 aa15.33■□□□□ 0.05
VCAN-205ENST00000503923 USP54Q70EL1 1684 aa15.33■□□□□ 0.04
VCAN-205ENST00000503923 PHF23Q9BUL5 403 aaPredicted RBP15.33■□□□□ 0.04
VCAN-205ENST00000503923 GCP02774 474 aa15.32■□□□□ 0.04
VCAN-205ENST00000503923 KCNH5Q8NCM2 988 aa15.32■□□□□ 0.04
VCAN-205ENST00000503923 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
VCAN-205ENST00000503923 KIF20BQ96Q89 1820 aa15.31■□□□□ 0.04
VCAN-205ENST00000503923 FYB1O15117 783 aa15.31■□□□□ 0.04
VCAN-205ENST00000503923 NGLY1Q96IV0 654 aa15.31■□□□□ 0.04
VCAN-205ENST00000503923 COG3Q96JB2 828 aa15.31■□□□□ 0.04
VCAN-205ENST00000503923 CGNL1Q0VF96 1302 aa15.31■□□□□ 0.04
VCAN-205ENST00000503923 OVOS2A0A0J9YW53 1432 aa15.31■□□□□ 0.04
VCAN-205ENST00000503923 OVOS2Q6IE36 1432 aa15.31■□□□□ 0.04
VCAN-205ENST00000503923 CPDO75976 1380 aa15.29■□□□□ 0.04
VCAN-205ENST00000503923 KIAA0232Q92628 1395 aa15.29■□□□□ 0.04
VCAN-205ENST00000503923 AFF2P51816 1311 aa15.29■□□□□ 0.04
VCAN-205ENST00000503923 ZC3H6P61129 1189 aaKnown RBP15.29■□□□□ 0.04
VCAN-205ENST00000503923 GGNBP2Q9H3C7 697 aa15.29■□□□□ 0.04
VCAN-205ENST00000503923 PRDM11Q9NQV5 511 aa15.29■□□□□ 0.04
VCAN-205ENST00000503923 KNSTRNQ9Y448 316 aa15.29■□□□□ 0.04
VCAN-205ENST00000503923 FAM83GA6ND36 823 aa15.28■□□□□ 0.04
VCAN-205ENST00000503923 ZNF772Q68DY9 489 aaPredicted RBP15.28■□□□□ 0.04
VCAN-205ENST00000503923 FNBP4Q8N3X1 1017 aaPredicted RBP15.28■□□□□ 0.04
VCAN-205ENST00000503923 COL14A1Q05707 1796 aaKnown RBP15.28■□□□□ 0.04
VCAN-205ENST00000503923 SOX12O15370 315 aa15.27■□□□□ 0.04
VCAN-205ENST00000503923 SLIT2O94813 1529 aa15.27■□□□□ 0.03
VCAN-205ENST00000503923 NFAT5O94916 1531 aa15.27■□□□□ 0.03
VCAN-205ENST00000503923 NSD2O96028 1365 aa15.26■□□□□ 0.03
VCAN-205ENST00000503923 USP21Q9UK80 565 aa15.26■□□□□ 0.03
VCAN-205ENST00000503923 NWD2Q9ULI1 1742 aa15.26■□□□□ 0.03
VCAN-205ENST00000503923 PLCH1Q4KWH8 1693 aa15.25■□□□□ 0.03
VCAN-205ENST00000503923 PER1O15534 1290 aaPredicted RBP15.25■□□□□ 0.03
VCAN-205ENST00000503923 CHRNA2Q15822 529 aa15.25■□□□□ 0.03
VCAN-205ENST00000503923 ARHGEF25Q86VW2 580 aa15.25■□□□□ 0.03
VCAN-205ENST00000503923 RGS17Q9UGC6 210 aaPredicted RBP15.25■□□□□ 0.03
VCAN-205ENST00000503923 ANKRD26Q9UPS8 1709 aa15.24■□□□□ 0.03
VCAN-205ENST00000503923 ZBTB7CA1YPR0 619 aa15.24■□□□□ 0.03
VCAN-205ENST00000503923 BCL9LQ86UU0 1499 aa15.24■□□□□ 0.03
VCAN-205ENST00000503923 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.23■□□□□ 0.03
VCAN-205ENST00000503923 UNC5CLQ8IV45 518 aa15.23■□□□□ 0.03
VCAN-205ENST00000503923 BTG4Q9NY30 223 aa15.23■□□□□ 0.03
VCAN-205ENST00000503923 AATKQ6ZMQ8 1374 aa15.23■□□□□ 0.03
VCAN-205ENST00000503923 AMER1Q5JTC6 1135 aaPredicted RBP15.22■□□□□ 0.03
VCAN-205ENST00000503923 TRPC5Q9UL62 973 aaPredicted RBP15.22■□□□□ 0.03
VCAN-205ENST00000503923 LMO7Q8WWI1 1683 aa15.22■□□□□ 0.03
VCAN-205ENST00000503923 LTN1O94822 1766 aa15.21■□□□□ 0.03
VCAN-205ENST00000503923 NRAPQ86VF7 1730 aa15.21■□□□□ 0.03
VCAN-205ENST00000503923 ZNF316A6NFI3 1004 aaPredicted RBP15.21■□□□□ 0.03
VCAN-205ENST00000503923 ABCC6O95255 1503 aa15.21■□□□□ 0.03
VCAN-205ENST00000503923 ATRNO75882 1429 aa15.2■□□□□ 0.02
VCAN-205ENST00000503923 POTEAQ6S8J7 498 aa15.2■□□□□ 0.02
VCAN-205ENST00000503923 QTRT2Q9H974 415 aaKnown RBP15.2■□□□□ 0.02
VCAN-205ENST00000503923 COL18A1P39060 1754 aa15.2■□□□□ 0.02
VCAN-205ENST00000503923 NPC1L1Q9UHC9 1359 aa15.2■□□□□ 0.02
VCAN-205ENST00000503923 CAMTA1Q9Y6Y1 1673 aa15.19■□□□□ 0.02
VCAN-205ENST00000503923 MORC1Q86VD1 984 aa15.19■□□□□ 0.02
VCAN-205ENST00000503923 MAP3K19Q56UN5 1328 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms