RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 DCAF11Q8TEB1 546 aa13.23□□□□□ -0.29
PROM1-204ENST00000503884 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
PROM1-204ENST00000503884 ATP7BP35670 1465 aa13.23□□□□□ -0.29
PROM1-204ENST00000503884 KIAA1210Q9ULL0 1709 aa13.22□□□□□ -0.29
PROM1-204ENST00000503884 MINK1Q8N4C8 1332 aaPredicted RBP13.22□□□□□ -0.29
PROM1-204ENST00000503884 HAP1P54257 671 aaPredicted RBP13.22□□□□□ -0.29
PROM1-204ENST00000503884 KDM2AQ9Y2K7 1162 aa13.22□□□□□ -0.29
PROM1-204ENST00000503884 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.29
PROM1-204ENST00000503884 LMOD2Q6P5Q4 547 aa13.21□□□□□ -0.29
PROM1-204ENST00000503884 GPRASP1Q5JY77 1395 aa13.2□□□□□ -0.3
PROM1-204ENST00000503884 THSD7AQ9UPZ6 1657 aa13.2□□□□□ -0.3
PROM1-204ENST00000503884 PHRF1Q9P1Y6 1649 aaKnown RBP13.2□□□□□ -0.3
PROM1-204ENST00000503884 KRT27Q7Z3Y8 459 aa13.19□□□□□ -0.3
PROM1-204ENST00000503884 DEFB132Q7Z7B7 95 aa13.19□□□□□ -0.3
PROM1-204ENST00000503884 BTG4Q9NY30 223 aa13.19□□□□□ -0.3
PROM1-204ENST00000503884 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
PROM1-204ENST00000503884 PLEKHG5O94827 1062 aa13.18□□□□□ -0.3
PROM1-204ENST00000503884 NUDT16Q96DE0 195 aaKnown RBP13.17□□□□□ -0.3
PROM1-204ENST00000503884 POLR3AO14802 1390 aaPredicted RBP13.17□□□□□ -0.3
PROM1-204ENST00000503884 SPATA31A5Q5VU36 1347 aa13.16□□□□□ -0.3
PROM1-204ENST00000503884 SPATA31A7Q8IWB4 1347 aa13.16□□□□□ -0.3
PROM1-204ENST00000503884 NGDNQ8NEJ9 315 aaKnown RBP13.16□□□□□ -0.3
PROM1-204ENST00000503884 CCDC9Q9Y3X0 531 aaKnown RBP13.16□□□□□ -0.3
PROM1-204ENST00000503884 RGPD1P0DJD0 1748 aa13.16□□□□□ -0.3
PROM1-204ENST00000503884 FAM98CQ17RN3 349 aaKnown RBP13.15□□□□□ -0.3
PROM1-204ENST00000503884 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
PROM1-204ENST00000503884 TNS1Q9HBL0 1735 aaKnown RBP13.15□□□□□ -0.3
PROM1-204ENST00000503884 LRP5O75197 1615 aa13.14□□□□□ -0.31
PROM1-204ENST00000503884 HOXD11P31277 338 aaPredicted RBP13.14□□□□□ -0.31
PROM1-204ENST00000503884 CDK19Q9BWU1 502 aa13.14□□□□□ -0.31
PROM1-204ENST00000503884 KIAA0232Q92628 1395 aa13.13□□□□□ -0.31
PROM1-204ENST00000503884 PLEKHG3A1L390 1219 aa13.13□□□□□ -0.31
PROM1-204ENST00000503884 SF3B2Q13435 895 aaKnown RBP13.13□□□□□ -0.31
PROM1-204ENST00000503884 LMO7Q8WWI1 1683 aa13.12□□□□□ -0.31
PROM1-204ENST00000503884 NRKQ7Z2Y5 1582 aa13.12□□□□□ -0.31
PROM1-204ENST00000503884 PAK3O75914 559 aaPredicted RBP13.12□□□□□ -0.31
PROM1-204ENST00000503884 PRDM11Q9NQV5 511 aa13.12□□□□□ -0.31
PROM1-204ENST00000503884 CCDC61Q9Y6R9 512 aa13.12□□□□□ -0.31
PROM1-204ENST00000503884 DISP2A7MBM2 1401 aa13.12□□□□□ -0.31
PROM1-204ENST00000503884 ACEP12821 1306 aa13.12□□□□□ -0.31
PROM1-204ENST00000503884 SPATA31A1Q5TZJ5 1347 aa13.12□□□□□ -0.31
PROM1-204ENST00000503884 NBPF1Q3BBV0 1214 aa13.11□□□□□ -0.31
PROM1-204ENST00000503884 NBPF8Q3BBV2 869 aa13.11□□□□□ -0.31
PROM1-204ENST00000503884 BAG6P46379 1132 aa13.1□□□□□ -0.31
PROM1-204ENST00000503884 CAMTA1Q9Y6Y1 1673 aa13.09□□□□□ -0.31
PROM1-204ENST00000503884 USP19O94966 1318 aa13.09□□□□□ -0.31
PROM1-204ENST00000503884 CPDO75976 1380 aa13.08□□□□□ -0.31
PROM1-204ENST00000503884 A0A0G2JS52 829 aa13.08□□□□□ -0.32
PROM1-204ENST00000503884 MYT1Q01538 1121 aa13.08□□□□□ -0.32
PROM1-204ENST00000503884 CHRNA2Q15822 529 aa13.08□□□□□ -0.32
PROM1-204ENST00000503884 FAM182BQ5T319 152 aa13.08□□□□□ -0.32
PROM1-204ENST00000503884 QRICH2Q9H0J4 1663 aa13.08□□□□□ -0.32
PROM1-204ENST00000503884 SSH2Q76I76 1423 aa13.07□□□□□ -0.32
PROM1-204ENST00000503884 ZC3H6P61129 1189 aaKnown RBP13.07□□□□□ -0.32
PROM1-204ENST00000503884 NUTM2GQ5VZR2 741 aa13.07□□□□□ -0.32
PROM1-204ENST00000503884 EN1Q05925 392 aaPredicted RBP13.06□□□□□ -0.32
PROM1-204ENST00000503884 BARGINQ6ZT62 677 aa13.06□□□□□ -0.32
PROM1-204ENST00000503884 CENPJQ9HC77 1338 aaPredicted RBP13.06□□□□□ -0.32
PROM1-204ENST00000503884 BRD4O60885 1362 aaPredicted RBP13.06□□□□□ -0.32
PROM1-204ENST00000503884 RREB1Q92766 1687 aa13.05□□□□□ -0.32
PROM1-204ENST00000503884 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
PROM1-204ENST00000503884 PARP4Q9UKK3 1724 aaKnown RBP13.05□□□□□ -0.32
PROM1-204ENST00000503884 TRPM1Q7Z4N2 1603 aa13.04□□□□□ -0.32
PROM1-204ENST00000503884 ABTB2Q8N961 1025 aa13.04□□□□□ -0.32
PROM1-204ENST00000503884 STRN4Q9NRL3 753 aa13.04□□□□□ -0.32
PROM1-204ENST00000503884 COL18A1P39060 1754 aa13.04□□□□□ -0.32
PROM1-204ENST00000503884 SLIT3O75094 1523 aa13.03□□□□□ -0.32
PROM1-204ENST00000503884 PSDA5PKW4 1024 aaPredicted RBP13.03□□□□□ -0.32
PROM1-204ENST00000503884 FAM196AQ6ZSG2 479 aa13.03□□□□□ -0.32
PROM1-204ENST00000503884 CAMKK2Q96RR4 588 aa13.03□□□□□ -0.32
PROM1-204ENST00000503884 CABP2Q9NPB3 220 aa13.03□□□□□ -0.32
PROM1-204ENST00000503884 USP6P35125 1406 aa13.03□□□□□ -0.32
PROM1-204ENST00000503884 COL5A2P05997 1499 aaPredicted RBP13.03□□□□□ -0.32
PROM1-204ENST00000503884 PIK3C2AO00443 1686 aa13.02□□□□□ -0.32
PROM1-204ENST00000503884 GCP02774 474 aa13.02□□□□□ -0.33
PROM1-204ENST00000503884 SRPK2P78362 688 aaKnown RBP13.02□□□□□ -0.33
PROM1-204ENST00000503884 LARP1Q6PKG0 1096 aaKnown RBP13.02□□□□□ -0.33
PROM1-204ENST00000503884 NLRP13Q86W25 1043 aa13.02□□□□□ -0.33
PROM1-204ENST00000503884 NUP188Q5SRE5 1749 aa13.02□□□□□ -0.33
PROM1-204ENST00000503884 PEAK1Q9H792 1746 aa13.02□□□□□ -0.33
PROM1-204ENST00000503884 TRIM37O94972 964 aa13.01□□□□□ -0.33
PROM1-204ENST00000503884 EZH2Q15910 746 aaKnown RBP13.01□□□□□ -0.33
PROM1-204ENST00000503884 TCP11L2Q8N4U5 519 aa13.01□□□□□ -0.33
PROM1-204ENST00000503884 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
PROM1-204ENST00000503884 THRAP3Q9Y2W1 955 aaKnown RBP13.01□□□□□ -0.33
PROM1-204ENST00000503884 PARD3Q8TEW0 1356 aa13.01□□□□□ -0.33
PROM1-204ENST00000503884 AKAP12Q02952 1782 aa13.01□□□□□ -0.33
PROM1-204ENST00000503884 SBF2Q86WG5 1849 aa13□□□□□ -0.33
PROM1-204ENST00000503884 WNK3Q9BYP7 1800 aa13□□□□□ -0.33
PROM1-204ENST00000503884 USP35Q9P2H5 1018 aa13□□□□□ -0.33
PROM1-204ENST00000503884 AATKQ6ZMQ8 1374 aa12.99□□□□□ -0.33
PROM1-204ENST00000503884 EVA1CP58658 441 aa12.99□□□□□ -0.33
PROM1-204ENST00000503884 R3HDM1Q15032 1099 aaKnown RBP12.99□□□□□ -0.33
PROM1-204ENST00000503884 CABP1Q9NZU7 370 aa12.99□□□□□ -0.33
PROM1-204ENST00000503884 LRRC37A3O60309 1634 aa12.99□□□□□ -0.33
PROM1-204ENST00000503884 CRB1P82279 1406 aa12.98□□□□□ -0.33
PROM1-204ENST00000503884 RGPD3A6NKT7 1758 aaPredicted RBP12.98□□□□□ -0.33
PROM1-204ENST00000503884 RGPD4Q7Z3J3 1758 aa12.98□□□□□ -0.33
PROM1-204ENST00000503884 RGPD5Q99666 1765 aa12.97□□□□□ -0.33
PROM1-204ENST00000503884 APBA3O96018 575 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms