RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 TMC1Q8TDI8 760 aa24.81■■□□□ 1.56
SMAD1-204ENST00000503324 ZNF692Q9BU19 519 aaPredicted RBP24.81■■□□□ 1.56
SMAD1-204ENST00000503324 NINLQ9Y2I6 1382 aa24.8■■□□□ 1.56
SMAD1-204ENST00000503324 CDCA8Q53HL2 280 aa24.8■■□□□ 1.56
SMAD1-204ENST00000503324 MON2Q7Z3U7 1717 aa24.79■■□□□ 1.56
SMAD1-204ENST00000503324 NRKQ7Z2Y5 1582 aa24.79■■□□□ 1.56
SMAD1-204ENST00000503324 ABCA3Q99758 1704 aa24.78■■□□□ 1.56
SMAD1-204ENST00000503324 CABLES1Q8TDN4 633 aa24.77■■□□□ 1.56
SMAD1-204ENST00000503324 CRYBG1Q9Y4K1 1723 aa24.77■■□□□ 1.56
SMAD1-204ENST00000503324 A0A1W2PP64 1363 aa24.77■■□□□ 1.56
SMAD1-204ENST00000503324 KTN1Q86UP2 1357 aaKnown RBP24.77■■□□□ 1.56
SMAD1-204ENST00000503324 ADAMTS2O95450 1211 aa24.76■■□□□ 1.55
SMAD1-204ENST00000503324 MEX3CQ5U5Q3 659 aaKnown RBP24.76■■□□□ 1.55
SMAD1-204ENST00000503324 RGS17Q9UGC6 210 aaPredicted RBP24.75■■□□□ 1.55
SMAD1-204ENST00000503324 TTC21BQ7Z4L5 1316 aa24.75■■□□□ 1.55
SMAD1-204ENST00000503324 MYOM1P52179 1685 aa24.75■■□□□ 1.55
SMAD1-204ENST00000503324 HDGFL2Q7Z4V5 671 aaPredicted RBP24.74■■□□□ 1.55
SMAD1-204ENST00000503324 TERF2IPQ9NYB0 399 aa24.74■■□□□ 1.55
SMAD1-204ENST00000503324 PIK3C2AO00443 1686 aa24.73■■□□□ 1.55
SMAD1-204ENST00000503324 C11orf95C9JLR9 678 aaPredicted RBP24.73■■□□□ 1.55
SMAD1-204ENST00000503324 PLEKHG5O94827 1062 aa24.73■■□□□ 1.55
SMAD1-204ENST00000503324 NUTM2GQ5VZR2 741 aa24.73■■□□□ 1.55
SMAD1-204ENST00000503324 ABTB2Q8N961 1025 aa24.73■■□□□ 1.55
SMAD1-204ENST00000503324 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
SMAD1-204ENST00000503324 MARF1Q9Y4F3 1742 aaKnown RBP24.72■■□□□ 1.55
SMAD1-204ENST00000503324 ANKRD36BQ8N2N9 1353 aa24.72■■□□□ 1.55
SMAD1-204ENST00000503324 TTC21AQ8NDW8 1320 aa24.71■■□□□ 1.55
SMAD1-204ENST00000503324 EDC4Q6P2E9 1401 aaKnown RBP24.7■■□□□ 1.55
SMAD1-204ENST00000503324 USP19O94966 1318 aa24.7■■□□□ 1.54
SMAD1-204ENST00000503324 C8orf37Q96NL8 207 aa24.7■■□□□ 1.54
SMAD1-204ENST00000503324 PHRF1Q9P1Y6 1649 aaKnown RBP24.7■■□□□ 1.54
SMAD1-204ENST00000503324 HAP1P54257 671 aaPredicted RBP24.68■■□□□ 1.54
SMAD1-204ENST00000503324 AFF2P51816 1311 aa24.67■■□□□ 1.54
SMAD1-204ENST00000503324 NLRP13Q86W25 1043 aa24.67■■□□□ 1.54
SMAD1-204ENST00000503324 NLRP6P59044 892 aa24.66■■□□□ 1.54
SMAD1-204ENST00000503324 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.66■■□□□ 1.54
SMAD1-204ENST00000503324 FNBP4Q8N3X1 1017 aaPredicted RBP24.65■■□□□ 1.54
SMAD1-204ENST00000503324 NGLY1Q96IV0 654 aa24.65■■□□□ 1.54
SMAD1-204ENST00000503324 POLR3GLQ9BT43 218 aa24.65■■□□□ 1.54
SMAD1-204ENST00000503324 NME9Q86XW9 330 aa24.64■■□□□ 1.54
SMAD1-204ENST00000503324 SLIT3O75094 1523 aa24.64■■□□□ 1.53
SMAD1-204ENST00000503324 USP31Q70CQ4 1352 aa24.64■■□□□ 1.53
SMAD1-204ENST00000503324 KIF7Q2M1P5 1343 aa24.63■■□□□ 1.53
SMAD1-204ENST00000503324 USP54Q70EL1 1684 aa24.62■■□□□ 1.53
SMAD1-204ENST00000503324 SLIT2O94813 1529 aa24.62■■□□□ 1.53
SMAD1-204ENST00000503324 POTEAQ6S8J7 498 aa24.62■■□□□ 1.53
SMAD1-204ENST00000503324 ZRANB1Q9UGI0 708 aa24.62■■□□□ 1.53
SMAD1-204ENST00000503324 FAM83GA6ND36 823 aa24.61■■□□□ 1.53
SMAD1-204ENST00000503324 ZNF772Q68DY9 489 aaPredicted RBP24.61■■□□□ 1.53
SMAD1-204ENST00000503324 CARD14Q9BXL6 1004 aa24.61■■□□□ 1.53
SMAD1-204ENST00000503324 BCL9LQ86UU0 1499 aa24.6■■□□□ 1.53
SMAD1-204ENST00000503324 GCP02774 474 aa24.6■■□□□ 1.53
SMAD1-204ENST00000503324 KIAA0232Q92628 1395 aa24.59■■□□□ 1.53
SMAD1-204ENST00000503324 ZEB1P37275 1124 aaPredicted RBP24.58■■□□□ 1.53
SMAD1-204ENST00000503324 PLCH1Q4KWH8 1693 aa24.58■■□□□ 1.53
SMAD1-204ENST00000503324 OVOS2A0A0J9YW53 1432 aa24.58■■□□□ 1.53
SMAD1-204ENST00000503324 OVOS2Q6IE36 1432 aa24.58■■□□□ 1.53
SMAD1-204ENST00000503324 COL14A1Q05707 1796 aaKnown RBP24.57■■□□□ 1.52
SMAD1-204ENST00000503324 CPDO75976 1380 aa24.57■■□□□ 1.52
SMAD1-204ENST00000503324 ZC3H6P61129 1189 aaKnown RBP24.57■■□□□ 1.52
SMAD1-204ENST00000503324 USP21Q9UK80 565 aa24.57■■□□□ 1.52
SMAD1-204ENST00000503324 NSD3Q9BZ95 1437 aa24.56■■□□□ 1.52
SMAD1-204ENST00000503324 PRDM11Q9NQV5 511 aa24.56■■□□□ 1.52
SMAD1-204ENST00000503324 NFAT5O94916 1531 aa24.56■■□□□ 1.52
SMAD1-204ENST00000503324 CCDC7Q96M83 1385 aa24.55■■□□□ 1.52
SMAD1-204ENST00000503324 WASHC2AQ641Q2 1341 aa24.55■■□□□ 1.52
SMAD1-204ENST00000503324 NWD2Q9ULI1 1742 aa24.55■■□□□ 1.52
SMAD1-204ENST00000503324 ILDR2Q71H61 639 aa24.54■■□□□ 1.52
SMAD1-204ENST00000503324 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.54■■□□□ 1.52
SMAD1-204ENST00000503324 ATRNO75882 1429 aa24.53■■□□□ 1.52
SMAD1-204ENST00000503324 FYB1O15117 783 aa24.53■■□□□ 1.52
SMAD1-204ENST00000503324 CHRNA2Q15822 529 aa24.53■■□□□ 1.52
SMAD1-204ENST00000503324 PANK3Q9H999 370 aa24.53■■□□□ 1.52
SMAD1-204ENST00000503324 NRAPQ86VF7 1730 aa24.52■■□□□ 1.52
SMAD1-204ENST00000503324 UNC5CLQ8IV45 518 aa24.52■■□□□ 1.52
SMAD1-204ENST00000503324 KCNH5Q8NCM2 988 aa24.52■■□□□ 1.52
SMAD1-204ENST00000503324 LMO7Q8WWI1 1683 aa24.51■■□□□ 1.51
SMAD1-204ENST00000503324 QTRT2Q9H974 415 aaKnown RBP24.51■■□□□ 1.51
SMAD1-204ENST00000503324 KIF20BQ96Q89 1820 aa24.5■■□□□ 1.51
SMAD1-204ENST00000503324 BTG4Q9NY30 223 aa24.5■■□□□ 1.51
SMAD1-204ENST00000503324 SOX12O15370 315 aa24.49■■□□□ 1.51
SMAD1-204ENST00000503324 ARHGEF25Q86VW2 580 aa24.49■■□□□ 1.51
SMAD1-204ENST00000503324 COG3Q96JB2 828 aa24.49■■□□□ 1.51
SMAD1-204ENST00000503324 GGNBP2Q9H3C7 697 aa24.49■■□□□ 1.51
SMAD1-204ENST00000503324 TRPC5Q9UL62 973 aaPredicted RBP24.49■■□□□ 1.51
SMAD1-204ENST00000503324 COL18A1P39060 1754 aa24.47■■□□□ 1.51
SMAD1-204ENST00000503324 CAMTA1Q9Y6Y1 1673 aa24.47■■□□□ 1.51
SMAD1-204ENST00000503324 AATKQ6ZMQ8 1374 aa24.47■■□□□ 1.51
SMAD1-204ENST00000503324 CGNL1Q0VF96 1302 aa24.45■■□□□ 1.5
SMAD1-204ENST00000503324 RXRBP28702 533 aa24.44■■□□□ 1.5
SMAD1-204ENST00000503324 RBM6P78332 1123 aaKnown RBP24.44■■□□□ 1.5
SMAD1-204ENST00000503324 VPS72Q15906 364 aa24.44■■□□□ 1.5
SMAD1-204ENST00000503324 ZBTB7CA1YPR0 619 aa24.43■■□□□ 1.5
SMAD1-204ENST00000503324 GLI3P10071 1580 aa24.42■■□□□ 1.5
SMAD1-204ENST00000503324 GJD4Q96KN9 370 aaPredicted RBP24.42■■□□□ 1.5
SMAD1-204ENST00000503324 AXIN2Q9Y2T1 843 aa24.42■■□□□ 1.5
SMAD1-204ENST00000503324 ABCC6O95255 1503 aa24.41■■□□□ 1.5
SMAD1-204ENST00000503324 COL5A2P05997 1499 aaPredicted RBP24.41■■□□□ 1.5
SMAD1-204ENST00000503324 CDK12Q9NYV4 1490 aaPredicted RBP24.4■■□□□ 1.5
SMAD1-204ENST00000503324 LTN1O94822 1766 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms