RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 NRAPQ86VF7 1730 aa12.46□□□□□ -0.41
RNF4-203ENST00000503123 ADAMTS2O95450 1211 aa12.46□□□□□ -0.41
RNF4-203ENST00000503123 FNBP4Q8N3X1 1017 aaPredicted RBP12.46□□□□□ -0.41
RNF4-203ENST00000503123 NGLY1Q96IV0 654 aa12.46□□□□□ -0.41
RNF4-203ENST00000503123 ATAD2Q6PL18 1390 aa12.45□□□□□ -0.42
RNF4-203ENST00000503123 USP54Q70EL1 1684 aa12.45□□□□□ -0.42
RNF4-203ENST00000503123 ACEP12821 1306 aa12.45□□□□□ -0.42
RNF4-203ENST00000503123 SLC24A1O60721 1099 aa12.45□□□□□ -0.42
RNF4-203ENST00000503123 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
RNF4-203ENST00000503123 SLIT2O94813 1529 aa12.45□□□□□ -0.42
RNF4-203ENST00000503123 PIK3C2AO00443 1686 aa12.45□□□□□ -0.42
RNF4-203ENST00000503123 BCL9LQ86UU0 1499 aa12.44□□□□□ -0.42
RNF4-203ENST00000503123 PUS7Q96PZ0 661 aaKnown RBP12.43□□□□□ -0.42
RNF4-203ENST00000503123 USP6P35125 1406 aa12.43□□□□□ -0.42
RNF4-203ENST00000503123 LMOD2Q6P5Q4 547 aa12.42□□□□□ -0.42
RNF4-203ENST00000503123 USP21Q9UK80 565 aa12.42□□□□□ -0.42
RNF4-203ENST00000503123 ATRNO75882 1429 aa12.42□□□□□ -0.42
RNF4-203ENST00000503123 BRWD3Q6RI45 1802 aa12.41□□□□□ -0.42
RNF4-203ENST00000503123 PAK3O75914 559 aaPredicted RBP12.41□□□□□ -0.42
RNF4-203ENST00000503123 RXRBP28702 533 aa12.41□□□□□ -0.42
RNF4-203ENST00000503123 HAP1P54257 671 aaPredicted RBP12.41□□□□□ -0.42
RNF4-203ENST00000503123 CPSF1Q10570 1443 aaKnown RBP12.41□□□□□ -0.42
RNF4-203ENST00000503123 SSH2Q76I76 1423 aa12.41□□□□□ -0.42
RNF4-203ENST00000503123 CCER1Q8TC90 406 aaPredicted RBP12.41□□□□□ -0.42
RNF4-203ENST00000503123 QTRT2Q9H974 415 aaKnown RBP12.41□□□□□ -0.42
RNF4-203ENST00000503123 TRPC5Q9UL62 973 aaPredicted RBP12.41□□□□□ -0.42
RNF4-203ENST00000503123 RBM6P78332 1123 aaKnown RBP12.4□□□□□ -0.42
RNF4-203ENST00000503123 CABLES1Q8TDN4 633 aa12.4□□□□□ -0.42
RNF4-203ENST00000503123 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
RNF4-203ENST00000503123 CABP1Q9NZU7 370 aa12.4□□□□□ -0.42
RNF4-203ENST00000503123 USP47Q96K76 1375 aa12.4□□□□□ -0.42
RNF4-203ENST00000503123 NINLQ9Y2I6 1382 aa12.4□□□□□ -0.42
RNF4-203ENST00000503123 GLI3P10071 1580 aa12.39□□□□□ -0.43
RNF4-203ENST00000503123 LMO7Q8WWI1 1683 aa12.39□□□□□ -0.43
RNF4-203ENST00000503123 SLIT3O75094 1523 aa12.39□□□□□ -0.43
RNF4-203ENST00000503123 TESK2Q96S53 571 aa12.39□□□□□ -0.43
RNF4-203ENST00000503123 USP19O94966 1318 aa12.38□□□□□ -0.43
RNF4-203ENST00000503123 RGPD5Q99666 1765 aa12.38□□□□□ -0.43
RNF4-203ENST00000503123 ST20-MTHFSA0A0A6YYL1 179 aa12.38□□□□□ -0.43
RNF4-203ENST00000503123 UNC5CLQ8IV45 518 aa12.38□□□□□ -0.43
RNF4-203ENST00000503123 MYOM1P52179 1685 aa12.38□□□□□ -0.43
RNF4-203ENST00000503123 LTN1O94822 1766 aa12.38□□□□□ -0.43
RNF4-203ENST00000503123 ABTB2Q8N961 1025 aa12.37□□□□□ -0.43
RNF4-203ENST00000503123 CD163L1Q9NR16 1453 aa12.37□□□□□ -0.43
RNF4-203ENST00000503123 COL18A1P39060 1754 aa12.37□□□□□ -0.43
RNF4-203ENST00000503123 RGS12O14924 1447 aa12.37□□□□□ -0.43
RNF4-203ENST00000503123 TTC21AQ8NDW8 1320 aa12.37□□□□□ -0.43
RNF4-203ENST00000503123 CPDO75976 1380 aa12.36□□□□□ -0.43
RNF4-203ENST00000503123 EP400Q96L91 3159 aa12.36□□□□□ -0.43
RNF4-203ENST00000503123 NLRP13Q86W25 1043 aa12.36□□□□□ -0.43
RNF4-203ENST00000503123 KIF20BQ96Q89 1820 aa12.35□□□□□ -0.43
RNF4-203ENST00000503123 KTN1Q86UP2 1357 aaKnown RBP12.35□□□□□ -0.43
RNF4-203ENST00000503123 FAM83GA6ND36 823 aa12.35□□□□□ -0.43
RNF4-203ENST00000503123 ABCC6O95255 1503 aa12.34□□□□□ -0.43
RNF4-203ENST00000503123 VPS72Q15906 364 aa12.34□□□□□ -0.43
RNF4-203ENST00000503123 GJD4Q96KN9 370 aaPredicted RBP12.34□□□□□ -0.43
RNF4-203ENST00000503123 EDC4Q6P2E9 1401 aaKnown RBP12.34□□□□□ -0.43
RNF4-203ENST00000503123 KIAA0232Q92628 1395 aa12.33□□□□□ -0.44
RNF4-203ENST00000503123 WNK3Q9BYP7 1800 aa12.33□□□□□ -0.44
RNF4-203ENST00000503123 TMF1P82094 1093 aa12.33□□□□□ -0.44
RNF4-203ENST00000503123 PRDM11Q9NQV5 511 aa12.33□□□□□ -0.44
RNF4-203ENST00000503123 TERF2IPQ9NYB0 399 aa12.33□□□□□ -0.44
RNF4-203ENST00000503123 TTC21BQ7Z4L5 1316 aa12.33□□□□□ -0.44
RNF4-203ENST00000503123 CDCA8Q53HL2 280 aa12.32□□□□□ -0.44
RNF4-203ENST00000503123 HDGFL2Q7Z4V5 671 aaPredicted RBP12.32□□□□□ -0.44
RNF4-203ENST00000503123 THSD7AQ9UPZ6 1657 aa12.32□□□□□ -0.44
RNF4-203ENST00000503123 CAMTA1Q9Y6Y1 1673 aa12.32□□□□□ -0.44
RNF4-203ENST00000503123 NFAT5O94916 1531 aa12.32□□□□□ -0.44
RNF4-203ENST00000503123 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
RNF4-203ENST00000503123 PLEKHG5O94827 1062 aa12.31□□□□□ -0.44
RNF4-203ENST00000503123 GCP02774 474 aa12.31□□□□□ -0.44
RNF4-203ENST00000503123 NLRP6P59044 892 aa12.31□□□□□ -0.44
RNF4-203ENST00000503123 NUTM2GQ5VZR2 741 aa12.31□□□□□ -0.44
RNF4-203ENST00000503123 BTG4Q9NY30 223 aa12.31□□□□□ -0.44
RNF4-203ENST00000503123 USP31Q70CQ4 1352 aa12.3□□□□□ -0.44
RNF4-203ENST00000503123 TMC1Q8TDI8 760 aa12.3□□□□□ -0.44
RNF4-203ENST00000503123 SLC12A5Q9H2X9 1139 aa12.3□□□□□ -0.44
RNF4-203ENST00000503123 ANKRD36BQ8N2N9 1353 aa12.3□□□□□ -0.44
RNF4-203ENST00000503123 PARP4Q9UKK3 1724 aaKnown RBP12.29□□□□□ -0.44
RNF4-203ENST00000503123 ONECUT3O60422 494 aaPredicted RBP12.29□□□□□ -0.44
RNF4-203ENST00000503123 ZC3H6P61129 1189 aaKnown RBP12.29□□□□□ -0.44
RNF4-203ENST00000503123 KCNH5Q8NCM2 988 aa12.29□□□□□ -0.44
RNF4-203ENST00000503123 AATKQ6ZMQ8 1374 aa12.29□□□□□ -0.44
RNF4-203ENST00000503123 FAM208AQ9UK61 1670 aaKnown RBP12.29□□□□□ -0.44
RNF4-203ENST00000503123 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
RNF4-203ENST00000503123 SPATA31A5Q5VU36 1347 aa12.28□□□□□ -0.44
RNF4-203ENST00000503123 SPATA31A7Q8IWB4 1347 aa12.28□□□□□ -0.44
RNF4-203ENST00000503123 OVOS2A0A0J9YW53 1432 aa12.28□□□□□ -0.44
RNF4-203ENST00000503123 OVOS2Q6IE36 1432 aa12.28□□□□□ -0.44
RNF4-203ENST00000503123 COL5A2P05997 1499 aaPredicted RBP12.27□□□□□ -0.44
RNF4-203ENST00000503123 EIF4G2P78344 907 aaKnown RBP eCLIP12.27□□□□□ -0.45
RNF4-203ENST00000503123 MAP2P11137 1827 aaKnown RBP12.26□□□□□ -0.45
RNF4-203ENST00000503123 CHRNA2Q15822 529 aa12.26□□□□□ -0.45
RNF4-203ENST00000503123 ARHGEF25Q86VW2 580 aa12.25□□□□□ -0.45
RNF4-203ENST00000503123 UPF1Q92900 1129 aaKnown RBP eCLIP12.25□□□□□ -0.45
RNF4-203ENST00000503123 CCDC9Q9Y3X0 531 aaKnown RBP12.25□□□□□ -0.45
RNF4-203ENST00000503123 SPATA31A1Q5TZJ5 1347 aa12.25□□□□□ -0.45
RNF4-203ENST00000503123 RGPD1P0DJD0 1748 aa12.25□□□□□ -0.45
RNF4-203ENST00000503123 SBF2Q86WG5 1849 aa12.24□□□□□ -0.45
RNF4-203ENST00000503123 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms