RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 FYB1O15117 783 aa15.16■□□□□ 0.02
USP46-204ENST00000503060 CEBPAP49715 358 aaPredicted RBP15.16■□□□□ 0.02
USP46-204ENST00000503060 TXNDC2Q86VQ3 553 aa15.16■□□□□ 0.02
USP46-204ENST00000503060 TRMT2AQ8IZ69 625 aaKnown RBP15.16■□□□□ 0.02
USP46-204ENST00000503060 ATP7BP35670 1465 aa15.16■□□□□ 0.02
USP46-204ENST00000503060 CPS1P31327 1500 aa15.16■□□□□ 0.02
USP46-204ENST00000503060 C3P01024 1663 aa15.15■□□□□ 0.02
USP46-204ENST00000503060 ADAMTS13Q76LX8 1427 aa15.15■□□□□ 0.02
USP46-204ENST00000503060 WASLO00401 505 aaPredicted RBP15.15■□□□□ 0.02
USP46-204ENST00000503060 EXOC6Q8TAG9 804 aa15.15■□□□□ 0.02
USP46-204ENST00000503060 RUNDC1Q96C34 613 aa15.15■□□□□ 0.02
USP46-204ENST00000503060 PLEKHG1Q9ULL1 1385 aa15.14■□□□□ 0.01
USP46-204ENST00000503060 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
USP46-204ENST00000503060 FER1L4A9Z1Z3 1794 aa15.13■□□□□ 0.01
USP46-204ENST00000503060 KIF20BQ96Q89 1820 aa15.13■□□□□ 0.01
USP46-204ENST00000503060 IQSEC2Q5JU85 1478 aa15.13■□□□□ 0.01
USP46-204ENST00000503060 E9PSI1 815 aa15.13■□□□□ 0.01
USP46-204ENST00000503060 LTKP29376 864 aa15.13■□□□□ 0.01
USP46-204ENST00000503060 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
USP46-204ENST00000503060 PLIN1O60240 522 aa15.12■□□□□ 0.01
USP46-204ENST00000503060 RBM19Q9Y4C8 960 aaKnown RBP15.12■□□□□ 0.01
USP46-204ENST00000503060 AAMPQ13685 434 aa15.11■□□□□ 0.01
USP46-204ENST00000503060 COL3A1P02461 1466 aaPredicted RBP15.11■□□□□ 0.01
USP46-204ENST00000503060 PPIP5K1Q6PFW1 1433 aa15.11■□□□□ 0.01
USP46-204ENST00000503060 WWC1Q8IX03 1113 aa15.11■□□□□ 0.01
USP46-204ENST00000503060 TCP11L2Q8N4U5 519 aa15.11■□□□□ 0.01
USP46-204ENST00000503060 DMRT2Q9Y5R5 561 aa15.11■□□□□ 0.01
USP46-204ENST00000503060 NKTRP30414 1462 aaKnown RBP15.1■□□□□ 0.01
USP46-204ENST00000503060 SLIT1O75093 1534 aa15.1■□□□□ 0.01
USP46-204ENST00000503060 ROBO2Q9HCK4 1378 aa15.1■□□□□ 0.01
USP46-204ENST00000503060 ARHGAP23Q9P227 1491 aa15.1■□□□□ 0.01
USP46-204ENST00000503060 CPSF1Q10570 1443 aaKnown RBP15.1■□□□□ 0.01
USP46-204ENST00000503060 U2AF1L5P0DN76 240 aaPredicted RBP15.09■□□□□ 0.01
USP46-204ENST00000503060 U2AF1Q01081 240 aaKnown RBP eCLIP15.09■□□□□ 0.01
USP46-204ENST00000503060 NUDT16Q96DE0 195 aaKnown RBP15.09■□□□□ 0.01
USP46-204ENST00000503060 EID1Q9Y6B2 187 aa15.09■□□□□ 0.01
USP46-204ENST00000503060 RSPH6AQ9H0K4 717 aa15.08■□□□□ 0.01
USP46-204ENST00000503060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.08■□□□□ 0
USP46-204ENST00000503060 RRP7AQ9Y3A4 280 aaKnown RBP15.08■□□□□ 0
USP46-204ENST00000503060 EDC4Q6P2E9 1401 aaKnown RBP15.08■□□□□ 0
USP46-204ENST00000503060 CRBNQ96SW2 442 aa15.07■□□□□ 0
USP46-204ENST00000503060 CDC42BPGQ6DT37 1551 aa15.07■□□□□ 0
USP46-204ENST00000503060 CCDC61Q9Y6R9 512 aa15.07■□□□□ 0
USP46-204ENST00000503060 NEUROD2Q15784 382 aa15.06■□□□□ 0
USP46-204ENST00000503060 CCDC27Q2M243 656 aa15.06■□□□□ 0
USP46-204ENST00000503060 ADGRB2O60241 1585 aa15.06■□□□□ 0
USP46-204ENST00000503060 PNPLA6Q8IY17 1366 aa15.06■□□□□ 0
USP46-204ENST00000503060 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.06■□□□□ 0
USP46-204ENST00000503060 PTPRUQ92729 1446 aa15.05■□□□□ -0
USP46-204ENST00000503060 U2SURPO15042 1029 aaKnown RBP15.05■□□□□ -0
USP46-204ENST00000503060 C20orf194Q5TEA3 1177 aa15.05■□□□□ -0
USP46-204ENST00000503060 WDR63Q8IWG1 891 aa15.05■□□□□ -0
USP46-204ENST00000503060 THEMISQ8N1K5 641 aaPredicted RBP15.05■□□□□ -0
USP46-204ENST00000503060 SLC26A8Q96RN1 970 aa15.05■□□□□ -0
USP46-204ENST00000503060 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.05■□□□□ -0
USP46-204ENST00000503060 PRR36Q9H6K5 1346 aa15.04■□□□□ -0
USP46-204ENST00000503060 NCKAP5LQ9HCH0 1330 aa15.04■□□□□ -0
USP46-204ENST00000503060 MON2Q7Z3U7 1717 aa15.04■□□□□ -0
USP46-204ENST00000503060 DIAPH1O60610 1272 aaKnown RBP15.03■□□□□ -0
USP46-204ENST00000503060 TBX22Q9Y458 520 aa15.03■□□□□ -0
USP46-204ENST00000503060 AKAP12Q02952 1782 aa15.03■□□□□ -0
USP46-204ENST00000503060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.03■□□□□ -0
USP46-204ENST00000503060 PLEKHF1Q96S99 279 aa15.03■□□□□ -0
USP46-204ENST00000503060 CCDC9Q9Y3X0 531 aaKnown RBP15.03■□□□□ -0
USP46-204ENST00000503060 NME9Q86XW9 330 aa15.02■□□□□ -0
USP46-204ENST00000503060 POLKQ9UBT6 870 aa15.02■□□□□ -0
USP46-204ENST00000503060 ITSN1Q15811 1721 aa15.02■□□□□ -0
USP46-204ENST00000503060 PAXIP1Q6ZW49 1069 aaPredicted RBP15.02□□□□□ -0.01
USP46-204ENST00000503060 DIP2AQ14689 1571 aa15.01□□□□□ -0.01
USP46-204ENST00000503060 ZNF692Q9BU19 519 aaPredicted RBP15.01□□□□□ -0.01
USP46-204ENST00000503060 CFAP44Q96MT7 982 aa15.01□□□□□ -0.01
USP46-204ENST00000503060 AMOTL2Q9Y2J4 779 aa15.01□□□□□ -0.01
USP46-204ENST00000503060 TOPAZ1Q8N9V7 1692 aa15□□□□□ -0.01
USP46-204ENST00000503060 BCAR3O75815 825 aa15□□□□□ -0.01
USP46-204ENST00000503060 FBLN1P23142 703 aa15□□□□□ -0.01
USP46-204ENST00000503060 PTCH1Q13635 1447 aa14.99□□□□□ -0.01
USP46-204ENST00000503060 MAPK8IP3Q9UPT6 1336 aa14.99□□□□□ -0.01
USP46-204ENST00000503060 ZRANB1Q9UGI0 708 aa14.99□□□□□ -0.01
USP46-204ENST00000503060 AATKQ6ZMQ8 1374 aa14.99□□□□□ -0.01
USP46-204ENST00000503060 TMPOP42166 694 aaKnown RBP14.98□□□□□ -0.01
USP46-204ENST00000503060 PNNQ9H307 717 aaKnown RBP14.98□□□□□ -0.01
USP46-204ENST00000503060 MAP2P11137 1827 aaKnown RBP14.98□□□□□ -0.01
USP46-204ENST00000503060 COG3Q96JB2 828 aa14.98□□□□□ -0.01
USP46-204ENST00000503060 NAP1L5Q96NT1 182 aaPredicted RBP14.98□□□□□ -0.01
USP46-204ENST00000503060 CEP170BQ9Y4F5 1589 aaPredicted RBP14.98□□□□□ -0.01
USP46-204ENST00000503060 RIMS1Q86UR5 1692 aaKnown RBP14.98□□□□□ -0.01
USP46-204ENST00000503060 PLEKHG3A1L390 1219 aa14.97□□□□□ -0.01
USP46-204ENST00000503060 PPM1GO15355 546 aaPredicted RBP14.97□□□□□ -0.01
USP46-204ENST00000503060 MYH16Q9H6N6 1097 aa14.97□□□□□ -0.01
USP46-204ENST00000503060 CDK12Q9NYV4 1490 aaPredicted RBP14.97□□□□□ -0.01
USP46-204ENST00000503060 EMILIN1Q9Y6C2 1016 aa14.96□□□□□ -0.01
USP46-204ENST00000503060 A0A0U1RQG5 324 aaPredicted RBP14.96□□□□□ -0.01
USP46-204ENST00000503060 FCHSD2O94868 740 aa14.96□□□□□ -0.01
USP46-204ENST00000503060 NRKQ7Z2Y5 1582 aa14.96□□□□□ -0.02
USP46-204ENST00000503060 ACEP12821 1306 aa14.96□□□□□ -0.02
USP46-204ENST00000503060 TRIM35Q9UPQ4 493 aa14.95□□□□□ -0.02
USP46-204ENST00000503060 TTC21BQ7Z4L5 1316 aa14.95□□□□□ -0.02
USP46-204ENST00000503060 LRRC7Q96NW7 1537 aa14.95□□□□□ -0.02
USP46-204ENST00000503060 XRN1Q8IZH2 1706 aaKnown RBP14.95□□□□□ -0.02
USP46-204ENST00000503060 NUTM2FA1L443 756 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms