RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 SPDYE4A6NLX3 237 aa8.25□□□□□ -1.09
CLCN3-203ENST00000502998 SATB1Q01826 763 aa8.25□□□□□ -1.09
CLCN3-203ENST00000502998 FAM50AQ14320 339 aaKnown RBP8.25□□□□□ -1.09
CLCN3-203ENST00000502998 NBPF10Q6P3W6 841 aaKnown RBP8.25□□□□□ -1.09
CLCN3-203ENST00000502998 NCOA2Q15596 1464 aa8.25□□□□□ -1.09
CLCN3-203ENST00000502998 MROH2AA6NES4 1674 aa8.24□□□□□ -1.09
CLCN3-203ENST00000502998 CLTCQ00610 1675 aaKnown RBP8.24□□□□□ -1.09
CLCN3-203ENST00000502998 ITGAEP38570 1179 aa8.24□□□□□ -1.09
CLCN3-203ENST00000502998 SETDB1Q15047 1291 aa8.24□□□□□ -1.09
CLCN3-203ENST00000502998 NBPF6Q5VWK0 638 aa8.24□□□□□ -1.09
CLCN3-203ENST00000502998 NBPF5PQ86XG9 351 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-203ENST00000502998 FRAT1Q92837 279 aaPredicted RBP8.24□□□□□ -1.09
CLCN3-203ENST00000502998 NBPF4Q96M43 638 aa8.24□□□□□ -1.09
CLCN3-203ENST00000502998 METRNQ9UJH8 293 aa8.24□□□□□ -1.09
CLCN3-203ENST00000502998 ALKQ9UM73 1620 aa8.24□□□□□ -1.09
CLCN3-203ENST00000502998 TCOF1Q13428 1488 aaKnown RBP8.24□□□□□ -1.09
CLCN3-203ENST00000502998 ADGBQ8N7X0 1667 aa8.24□□□□□ -1.09
CLCN3-203ENST00000502998 ZMYM3Q14202 1370 aa8.23□□□□□ -1.09
CLCN3-203ENST00000502998 NPATQ14207 1427 aa8.23□□□□□ -1.09
CLCN3-203ENST00000502998 C7P10643 843 aa8.23□□□□□ -1.09
CLCN3-203ENST00000502998 MAP2K1Q02750 393 aaPredicted RBP8.23□□□□□ -1.09
CLCN3-203ENST00000502998 SEMA3FQ13275 785 aa8.23□□□□□ -1.09
CLCN3-203ENST00000502998 ZKSCAN8Q15776 578 aaPredicted RBP8.23□□□□□ -1.09
CLCN3-203ENST00000502998 RINLQ6ZS11 566 aa8.23□□□□□ -1.09
CLCN3-203ENST00000502998 SLC39A7Q92504 469 aa8.23□□□□□ -1.09
CLCN3-203ENST00000502998 VPS8Q8N3P4 1428 aa8.22□□□□□ -1.09
CLCN3-203ENST00000502998 CAMSAP2Q08AD1 1489 aa8.22□□□□□ -1.09
CLCN3-203ENST00000502998 GOLIM4O00461 696 aa8.22□□□□□ -1.09
CLCN3-203ENST00000502998 ATMINO43313 823 aaPredicted RBP8.22□□□□□ -1.09
CLCN3-203ENST00000502998 PIP4K2BP78356 416 aa8.22□□□□□ -1.09
CLCN3-203ENST00000502998 LMOD3Q0VAK6 560 aa8.22□□□□□ -1.09
CLCN3-203ENST00000502998 GGT6Q6P531 493 aa8.22□□□□□ -1.09
CLCN3-203ENST00000502998 BANK1Q8NDB2 785 aa8.22□□□□□ -1.09
CLCN3-203ENST00000502998 RTEL1-TNFRSF6BF6WH68 1400 aa8.21□□□□□ -1.09
CLCN3-203ENST00000502998 PTPRKQ15262 1439 aa8.21□□□□□ -1.09
CLCN3-203ENST00000502998 CFAP65Q6ZU64 1925 aaKnown RBP8.21□□□□□ -1.09
CLCN3-203ENST00000502998 CCDC141Q6ZP82 1450 aa8.21□□□□□ -1.09
CLCN3-203ENST00000502998 FAM9BQ8IZU0 186 aa8.21□□□□□ -1.1
CLCN3-203ENST00000502998 MKL1Q969V6 931 aa8.21□□□□□ -1.1
CLCN3-203ENST00000502998 MS4A3Q96HJ5 214 aa8.21□□□□□ -1.1
CLCN3-203ENST00000502998 EFCC1Q9HA90 598 aa8.21□□□□□ -1.1
CLCN3-203ENST00000502998 PPP4R2Q9NY27 417 aa8.21□□□□□ -1.1
CLCN3-203ENST00000502998 RGS17Q9UGC6 210 aaPredicted RBP8.21□□□□□ -1.1
CLCN3-203ENST00000502998 MYO3AQ8NEV4 1616 aa8.21□□□□□ -1.1
CLCN3-203ENST00000502998 PLA2R1Q13018 1463 aa8.2□□□□□ -1.1
CLCN3-203ENST00000502998 LRRC9Q6ZRR7 1453 aa8.2□□□□□ -1.1
CLCN3-203ENST00000502998 RAD21O60216 631 aa8.2□□□□□ -1.1
CLCN3-203ENST00000502998 ZNF500O60304 480 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-203ENST00000502998 KDM4AO75164 1064 aa8.2□□□□□ -1.1
CLCN3-203ENST00000502998 POTEJP0CG39 1038 aa8.2□□□□□ -1.1
CLCN3-203ENST00000502998 ARID4AP29374 1257 aaPredicted RBP8.2□□□□□ -1.1
CLCN3-203ENST00000502998 CCDC96Q2M329 555 aa8.2□□□□□ -1.1
CLCN3-203ENST00000502998 MAMSTRQ6ZN01 415 aa8.2□□□□□ -1.1
CLCN3-203ENST00000502998 DHX29Q7Z478 1369 aaKnown RBP8.2□□□□□ -1.1
CLCN3-203ENST00000502998 CEP170BQ9Y4F5 1589 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-203ENST00000502998 SRCAPQ6ZRS2 3230 aa8.19□□□□□ -1.1
CLCN3-203ENST00000502998 ZNF142P52746 1687 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-203ENST00000502998 IRF6O14896 467 aa8.19□□□□□ -1.1
CLCN3-203ENST00000502998 ZSCAN20P17040 1043 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-203ENST00000502998 CALRP27797 417 aaKnown RBP8.19□□□□□ -1.1
CLCN3-203ENST00000502998 HDAC1Q13547 482 aaPredicted RBP8.19□□□□□ -1.1
CLCN3-203ENST00000502998 PKD2Q13563 968 aa8.19□□□□□ -1.1
CLCN3-203ENST00000502998 NGEFQ8N5V2 710 aa8.19□□□□□ -1.1
CLCN3-203ENST00000502998 ARHGEF5Q12774 1597 aa8.18□□□□□ -1.1
CLCN3-203ENST00000502998 NEURL4Q96JN8 1562 aa8.18□□□□□ -1.1
CLCN3-203ENST00000502998 KIF3BO15066 747 aa8.18□□□□□ -1.1
CLCN3-203ENST00000502998 KANK4Q5T7N3 995 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-203ENST00000502998 SPTY2D1Q68D10 685 aaPredicted RBP8.18□□□□□ -1.1
CLCN3-203ENST00000502998 KCTD17Q8N5Z5 321 aa8.18□□□□□ -1.1
CLCN3-203ENST00000502998 MAP3K1Q13233 1512 aa8.18□□□□□ -1.1
CLCN3-203ENST00000502998 E9PSI1 815 aa8.17□□□□□ -1.1
CLCN3-203ENST00000502998 DCAF11Q8TEB1 546 aa8.17□□□□□ -1.1
CLCN3-203ENST00000502998 ESPNB1AK53 854 aa8.16□□□□□ -1.1
CLCN3-203ENST00000502998 TSPY4P0CV99 314 aa8.16□□□□□ -1.1
CLCN3-203ENST00000502998 TSPY10P0CW01 314 aa8.16□□□□□ -1.1
CLCN3-203ENST00000502998 RBM25P49756 843 aaKnown RBP8.16□□□□□ -1.1
CLCN3-203ENST00000502998 CDCA8Q53HL2 280 aa8.16□□□□□ -1.1
CLCN3-203ENST00000502998 TSPAN18Q96SJ8 248 aa8.16□□□□□ -1.1
CLCN3-203ENST00000502998 KDM5DQ9BY66 1539 aa8.16□□□□□ -1.1
CLCN3-203ENST00000502998 FEZ2Q9UHY8 353 aaPredicted RBP8.16□□□□□ -1.1
CLCN3-203ENST00000502998 CEP83Q9Y592 693 aa8.16□□□□□ -1.1
CLCN3-203ENST00000502998 DNMT1P26358 1616 aaKnown RBP8.15□□□□□ -1.1
CLCN3-203ENST00000502998 VWDEQ8N2E2 1590 aa8.15□□□□□ -1.1
CLCN3-203ENST00000502998 MAST1Q9Y2H9 1570 aa8.15□□□□□ -1.1
CLCN3-203ENST00000502998 SHANK2Q9UPX8 1470 aa8.15□□□□□ -1.1
CLCN3-203ENST00000502998 MYOM3Q5VTT5 1437 aa8.15□□□□□ -1.1
CLCN3-203ENST00000502998 LOC102724159A0A0B4J2E5 919 aa8.15□□□□□ -1.1
CLCN3-203ENST00000502998 MTA1Q13330 715 aa8.15□□□□□ -1.1
CLCN3-203ENST00000502998 MYBPC2Q14324 1141 aa8.15□□□□□ -1.1
CLCN3-203ENST00000502998 PWP2Q15269 919 aaKnown RBP8.15□□□□□ -1.1
CLCN3-203ENST00000502998 FBXO31Q5XUX0 539 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-203ENST00000502998 MYCBPQ99417 103 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-203ENST00000502998 CCDC94Q9BW85 323 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-203ENST00000502998 MRVI1Q9Y6F6 885 aa8.15□□□□□ -1.1
CLCN3-203ENST00000502998 FAM135AQ9P2D6 1515 aa8.14□□□□□ -1.11
CLCN3-203ENST00000502998 A2ML1A8K2U0 1454 aa8.14□□□□□ -1.11
CLCN3-203ENST00000502998 PZPP20742 1482 aa8.14□□□□□ -1.11
CLCN3-203ENST00000502998 MIA2Q96PC5 1412 aa8.14□□□□□ -1.11
CLCN3-203ENST00000502998 TOM1O60784 492 aa8.14□□□□□ -1.11
CLCN3-203ENST00000502998 IRX5P78411 483 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms