RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 PRR20EP86478 221 aa9.05□□□□□ -0.96
RFC1-205ENST00000502991 PRR20CP86479 221 aa9.05□□□□□ -0.96
RFC1-205ENST00000502991 PRR20DP86480 221 aa9.05□□□□□ -0.96
RFC1-205ENST00000502991 PRR20BP86481 221 aa9.05□□□□□ -0.96
RFC1-205ENST00000502991 PRR20AP86496 221 aa9.05□□□□□ -0.96
RFC1-205ENST00000502991 MRGPRX2Q96LB1 330 aa9.05□□□□□ -0.96
RFC1-205ENST00000502991 WNT7AO00755 349 aa9.04□□□□□ -0.96
RFC1-205ENST00000502991 LAPTM4AQ15012 233 aa9.04□□□□□ -0.96
RFC1-205ENST00000502991 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
RFC1-205ENST00000502991 WNT7BP56706 349 aa9.02□□□□□ -0.97
RFC1-205ENST00000502991 CYP4X1Q8N118 509 aa9.02□□□□□ -0.97
RFC1-205ENST00000502991 ZNF511Q8NB15 262 aa9.02□□□□□ -0.97
RFC1-205ENST00000502991 EPS8L1Q8TE68 723 aa9.02□□□□□ -0.97
RFC1-205ENST00000502991 HMX1Q9NP08 348 aaPredicted RBP9.02□□□□□ -0.97
RFC1-205ENST00000502991 TOR4AQ9NXH8 423 aa9.02□□□□□ -0.97
RFC1-205ENST00000502991 TTC24A2A3L6 582 aaPredicted RBP9.01□□□□□ -0.97
RFC1-205ENST00000502991 USP17L8P0C7I0 530 aa9.01□□□□□ -0.97
RFC1-205ENST00000502991 NR6A1Q15406 480 aa9.01□□□□□ -0.97
RFC1-205ENST00000502991 EHBP1Q8NDI1 1231 aa9.01□□□□□ -0.97
RFC1-205ENST00000502991 FOXJ1Q92949 421 aa9.01□□□□□ -0.97
RFC1-205ENST00000502991 TIMELESSQ9UNS1 1208 aa9.01□□□□□ -0.97
RFC1-205ENST00000502991 J3QL48 77 aa9□□□□□ -0.97
RFC1-205ENST00000502991 PKDCCQ504Y2 493 aa8.99□□□□□ -0.97
RFC1-205ENST00000502991 SNIP1Q8TAD8 396 aaKnown RBP8.98□□□□□ -0.97
RFC1-205ENST00000502991 SIAH2O43255 324 aa8.97□□□□□ -0.97
RFC1-205ENST00000502991 C4orf48Q5BLP8 95 aa8.97□□□□□ -0.97
RFC1-205ENST00000502991 TRAF7Q6Q0C0 670 aa8.97□□□□□ -0.97
RFC1-205ENST00000502991 ARXQ96QS3 562 aa8.97□□□□□ -0.97
RFC1-205ENST00000502991 TLL2Q9Y6L7 1015 aa8.97□□□□□ -0.97
RFC1-205ENST00000502991 ALDH1A1P00352 501 aa8.96□□□□□ -0.98
RFC1-205ENST00000502991 SMPD1P17405 629 aa8.96□□□□□ -0.98
RFC1-205ENST00000502991 AGERQ15109 404 aa8.96□□□□□ -0.98
RFC1-205ENST00000502991 ST8SIA5O15466 376 aa8.95□□□□□ -0.98
RFC1-205ENST00000502991 MYT1Q01538 1121 aa8.95□□□□□ -0.98
RFC1-205ENST00000502991 DGAT1O75907 488 aa8.94□□□□□ -0.98
RFC1-205ENST00000502991 TMEM259Q4ZIN3 620 aa8.94□□□□□ -0.98
RFC1-205ENST00000502991 CARD14Q9BXL6 1004 aa8.94□□□□□ -0.98
RFC1-205ENST00000502991 TRIM34Q9BYJ4 488 aa8.94□□□□□ -0.98
RFC1-205ENST00000502991 MAGEB6P1A0A0J9YX57 407 aa8.93□□□□□ -0.98
RFC1-205ENST00000502991 HPS1Q92902 700 aa8.93□□□□□ -0.98
RFC1-205ENST00000502991 SNRKQ9NRH2 765 aa8.93□□□□□ -0.98
RFC1-205ENST00000502991 FKBPLQ9UIM3 349 aa8.93□□□□□ -0.98
RFC1-205ENST00000502991 ARID5BQ14865 1188 aa8.92□□□□□ -0.98
RFC1-205ENST00000502991 ARMC2Q8NEN0 867 aa8.92□□□□□ -0.98
RFC1-205ENST00000502991 VARSP26640 1264 aaKnown RBP8.91□□□□□ -0.98
RFC1-205ENST00000502991 NBPF14Q5TI25 921 aa8.91□□□□□ -0.98
RFC1-205ENST00000502991 SH3BP5LQ7L8J4 393 aa8.91□□□□□ -0.98
RFC1-205ENST00000502991 BPHLQ86WA6 291 aaPredicted RBP8.91□□□□□ -0.98
RFC1-205ENST00000502991 GJD4Q96KN9 370 aaPredicted RBP8.9□□□□□ -0.98
RFC1-205ENST00000502991 DACH1Q9UI36 760 aa8.9□□□□□ -0.98
RFC1-205ENST00000502991 ERICH6Q7L0X2 663 aa8.89□□□□□ -0.99
RFC1-205ENST00000502991 SH3RF1Q7Z6J0 888 aa8.89□□□□□ -0.99
RFC1-205ENST00000502991 MTMR14Q8NCE2 650 aa8.89□□□□□ -0.99
RFC1-205ENST00000502991 FAM174AQ8TBP5 190 aa8.89□□□□□ -0.99
RFC1-205ENST00000502991 OCSTAMPQ9BR26 566 aa8.89□□□□□ -0.99
RFC1-205ENST00000502991 AAASQ9NRG9 546 aa8.89□□□□□ -0.99
RFC1-205ENST00000502991 WASF2Q9Y6W5 498 aa8.89□□□□□ -0.99
RFC1-205ENST00000502991 AVPP01185 164 aa8.87□□□□□ -0.99
RFC1-205ENST00000502991 ARHGAP9Q9BRR9 750 aa8.87□□□□□ -0.99
RFC1-205ENST00000502991 GTF3C3Q9Y5Q9 886 aa8.87□□□□□ -0.99
RFC1-205ENST00000502991 PDXDC2PQ6P474 469 aa8.86□□□□□ -0.99
RFC1-205ENST00000502991 C1QTNF2Q9BXJ5 285 aa8.86□□□□□ -0.99
RFC1-205ENST00000502991 POTECB2RU33 542 aa8.85□□□□□ -0.99
RFC1-205ENST00000502991 AXIN1O15169 862 aa8.85□□□□□ -0.99
RFC1-205ENST00000502991 ERFEQ4G0M1 354 aa8.85□□□□□ -0.99
RFC1-205ENST00000502991 BANK1Q8NDB2 785 aa8.85□□□□□ -0.99
RFC1-205ENST00000502991 GPKOWQ92917 476 aaPredicted RBP eCLIP8.85□□□□□ -0.99
RFC1-205ENST00000502991 GRM5P41594 1212 aa8.84□□□□□ -0.99
RFC1-205ENST00000502991 NNTQ13423 1086 aa8.84□□□□□ -0.99
RFC1-205ENST00000502991 GPR37L1O60883 481 aa8.83□□□□□ -1
RFC1-205ENST00000502991 ADH1CP00326 375 aa8.83□□□□□ -1
RFC1-205ENST00000502991 NR3C2P08235 984 aa8.83□□□□□ -1
RFC1-205ENST00000502991 ZBTB33Q86T24 672 aa8.83□□□□□ -1
RFC1-205ENST00000502991 ADAM32Q8TC27 787 aa8.83□□□□□ -1
RFC1-205ENST00000502991 CDK15Q96Q40 435 aa8.83□□□□□ -1
RFC1-205ENST00000502991 ZC3H4Q9UPT8 1303 aaKnown RBP8.82□□□□□ -1
RFC1-205ENST00000502991 PTK2Q05397 1052 aa8.82□□□□□ -1
RFC1-205ENST00000502991 VASH1Q7L8A9 365 aaPredicted RBP8.82□□□□□ -1
RFC1-205ENST00000502991 FSHRP23945 695 aa8.81□□□□□ -1
RFC1-205ENST00000502991 CRIPAKQ8N1N5 446 aa8.81□□□□□ -1
RFC1-205ENST00000502991 MPNDQ8N594 471 aa8.81□□□□□ -1
RFC1-205ENST00000502991 FBXO45P0C2W1 286 aa8.8□□□□□ -1
RFC1-205ENST00000502991 SMCPP49901 116 aaPredicted RBP8.8□□□□□ -1
RFC1-205ENST00000502991 CTC1Q2NKJ3 1217 aa8.8□□□□□ -1
RFC1-205ENST00000502991 TRMT44Q8IYL2 757 aaKnown RBP8.8□□□□□ -1
RFC1-205ENST00000502991 PNMA1Q8ND90 353 aa8.8□□□□□ -1
RFC1-205ENST00000502991 TBC1D2BQ9UPU7 963 aa8.8□□□□□ -1
RFC1-205ENST00000502991 BMP1P13497 986 aa8.79□□□□□ -1
RFC1-205ENST00000502991 WDR4P57081 412 aaKnown RBP8.79□□□□□ -1
RFC1-205ENST00000502991 SLC10A4Q96EP9 437 aa8.79□□□□□ -1
RFC1-205ENST00000502991 CAPN5O15484 640 aaPredicted RBP8.78□□□□□ -1
RFC1-205ENST00000502991 TIMP2P16035 220 aa8.78□□□□□ -1
RFC1-205ENST00000502991 ZNF787Q6DD87 383 aa8.78□□□□□ -1
RFC1-205ENST00000502991 ITPKCQ96DU7 683 aa8.78□□□□□ -1
RFC1-205ENST00000502991 ZFAND3Q9H8U3 227 aa8.78□□□□□ -1
RFC1-205ENST00000502991 GMPR2Q9P2T1 348 aaKnown RBP8.78□□□□□ -1
RFC1-205ENST00000502991 GPSM3Q9Y4H4 160 aa8.78□□□□□ -1
RFC1-205ENST00000502991 RAB15P59190 212 aa8.77□□□□□ -1.01
RFC1-205ENST00000502991 MCM6Q14566 821 aa8.77□□□□□ -1.01
RFC1-205ENST00000502991 KLF16Q9BXK1 252 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms