RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 DISP2A7MBM2 1401 aa8.95□□□□□ -0.98
LSM3P4-201ENST00000502948 PMFBP1Q8TBY8 1022 aa8.94□□□□□ -0.98
LSM3P4-201ENST00000502948 CABLES1Q8TDN4 633 aa8.94□□□□□ -0.98
LSM3P4-201ENST00000502948 SF3B2Q13435 895 aaKnown RBP8.93□□□□□ -0.98
LSM3P4-201ENST00000502948 BTG4Q9NY30 223 aa8.93□□□□□ -0.98
LSM3P4-201ENST00000502948 SPATA31A5Q5VU36 1347 aa8.93□□□□□ -0.98
LSM3P4-201ENST00000502948 SPATA31A7Q8IWB4 1347 aa8.93□□□□□ -0.98
LSM3P4-201ENST00000502948 PLEKHG3A1L390 1219 aa8.92□□□□□ -0.98
LSM3P4-201ENST00000502948 SAFB2Q14151 953 aaKnown RBP eCLIP8.92□□□□□ -0.98
LSM3P4-201ENST00000502948 NGDNQ8NEJ9 315 aaKnown RBP8.92□□□□□ -0.98
LSM3P4-201ENST00000502948 CCDC61Q9Y6R9 512 aa8.92□□□□□ -0.98
LSM3P4-201ENST00000502948 SRCAPQ6ZRS2 3230 aa8.92□□□□□ -0.98
LSM3P4-201ENST00000502948 TNS1Q9HBL0 1735 aaKnown RBP8.91□□□□□ -0.98
LSM3P4-201ENST00000502948 CPDO75976 1380 aa8.91□□□□□ -0.98
LSM3P4-201ENST00000502948 PARD3Q8TEW0 1356 aa8.91□□□□□ -0.98
LSM3P4-201ENST00000502948 MINK1Q8N4C8 1332 aaPredicted RBP8.91□□□□□ -0.98
LSM3P4-201ENST00000502948 BAG6P46379 1132 aa8.91□□□□□ -0.98
LSM3P4-201ENST00000502948 LMOD2Q6P5Q4 547 aa8.91□□□□□ -0.98
LSM3P4-201ENST00000502948 NUDT16Q96DE0 195 aaKnown RBP8.91□□□□□ -0.98
LSM3P4-201ENST00000502948 HIRIP3Q9BW71 556 aaPredicted RBP8.91□□□□□ -0.98
LSM3P4-201ENST00000502948 LMO7Q8WWI1 1683 aa8.91□□□□□ -0.98
LSM3P4-201ENST00000502948 KDM2AQ9Y2K7 1162 aa8.9□□□□□ -0.98
LSM3P4-201ENST00000502948 NRKQ7Z2Y5 1582 aa8.9□□□□□ -0.99
LSM3P4-201ENST00000502948 SPATA31A1Q5TZJ5 1347 aa8.89□□□□□ -0.99
LSM3P4-201ENST00000502948 C11orf95C9JLR9 678 aaPredicted RBP8.89□□□□□ -0.99
LSM3P4-201ENST00000502948 BARGINQ6ZT62 677 aa8.89□□□□□ -0.99
LSM3P4-201ENST00000502948 CDK19Q9BWU1 502 aa8.89□□□□□ -0.99
LSM3P4-201ENST00000502948 PRDM11Q9NQV5 511 aa8.89□□□□□ -0.99
LSM3P4-201ENST00000502948 CCDC9Q9Y3X0 531 aaKnown RBP8.89□□□□□ -0.99
LSM3P4-201ENST00000502948 PARP4Q9UKK3 1724 aaKnown RBP8.88□□□□□ -0.99
LSM3P4-201ENST00000502948 KIAA0232Q92628 1395 aa8.88□□□□□ -0.99
LSM3P4-201ENST00000502948 USP19O94966 1318 aa8.88□□□□□ -0.99
LSM3P4-201ENST00000502948 ACEP12821 1306 aa8.88□□□□□ -0.99
LSM3P4-201ENST00000502948 FAM98CQ17RN3 349 aaKnown RBP8.88□□□□□ -0.99
LSM3P4-201ENST00000502948 NBPF8Q3BBV2 869 aa8.88□□□□□ -0.99
LSM3P4-201ENST00000502948 DEFB132Q7Z7B7 95 aa8.88□□□□□ -0.99
LSM3P4-201ENST00000502948 THRAP3Q9Y2W1 955 aaKnown RBP8.88□□□□□ -0.99
LSM3P4-201ENST00000502948 RGPD3A6NKT7 1758 aaPredicted RBP8.88□□□□□ -0.99
LSM3P4-201ENST00000502948 RGPD4Q7Z3J3 1758 aa8.88□□□□□ -0.99
LSM3P4-201ENST00000502948 RREB1Q92766 1687 aa8.88□□□□□ -0.99
LSM3P4-201ENST00000502948 FAM196AQ6ZSG2 479 aa8.87□□□□□ -0.99
LSM3P4-201ENST00000502948 QRICH2Q9H0J4 1663 aa8.87□□□□□ -0.99
LSM3P4-201ENST00000502948 SSH2Q76I76 1423 aa8.87□□□□□ -0.99
LSM3P4-201ENST00000502948 SLIT3O75094 1523 aa8.86□□□□□ -0.99
LSM3P4-201ENST00000502948 CAMTA1Q9Y6Y1 1673 aa8.86□□□□□ -0.99
LSM3P4-201ENST00000502948 PAK3O75914 559 aaPredicted RBP8.86□□□□□ -0.99
LSM3P4-201ENST00000502948 NLRP13Q86W25 1043 aa8.86□□□□□ -0.99
LSM3P4-201ENST00000502948 TRPM1Q7Z4N2 1603 aa8.86□□□□□ -0.99
LSM3P4-201ENST00000502948 CENPJQ9HC77 1338 aaPredicted RBP8.85□□□□□ -0.99
LSM3P4-201ENST00000502948 ABTB2Q8N961 1025 aa8.85□□□□□ -0.99
LSM3P4-201ENST00000502948 PPIP5K1Q6PFW1 1433 aa8.85□□□□□ -0.99
LSM3P4-201ENST00000502948 ABCC6O95255 1503 aa8.85□□□□□ -0.99
LSM3P4-201ENST00000502948 COL18A1P39060 1754 aa8.84□□□□□ -0.99
LSM3P4-201ENST00000502948 AKAP12Q02952 1782 aa8.84□□□□□ -0.99
LSM3P4-201ENST00000502948 BCL9O00512 1426 aa8.84□□□□□ -0.99
LSM3P4-201ENST00000502948 USP6P35125 1406 aa8.84□□□□□ -0.99
LSM3P4-201ENST00000502948 CAMKK2Q96RR4 588 aa8.84□□□□□ -0.99
LSM3P4-201ENST00000502948 PEAK1Q9H792 1746 aa8.84□□□□□ -0.99
LSM3P4-201ENST00000502948 SBF2Q86WG5 1849 aa8.84□□□□□ -0.99
LSM3P4-201ENST00000502948 WNK3Q9BYP7 1800 aa8.84□□□□□ -0.99
LSM3P4-201ENST00000502948 AATKQ6ZMQ8 1374 aa8.84□□□□□ -0.99
LSM3P4-201ENST00000502948 COL5A2P05997 1499 aaPredicted RBP8.83□□□□□ -1
LSM3P4-201ENST00000502948 NUP188Q5SRE5 1749 aa8.83□□□□□ -1
LSM3P4-201ENST00000502948 CRB1P82279 1406 aa8.83□□□□□ -1
LSM3P4-201ENST00000502948 A0A0G2JS52 829 aa8.83□□□□□ -1
LSM3P4-201ENST00000502948 GCP02774 474 aa8.83□□□□□ -1
LSM3P4-201ENST00000502948 MYT1Q01538 1121 aa8.83□□□□□ -1
LSM3P4-201ENST00000502948 NBPF1Q3BBV0 1214 aa8.83□□□□□ -1
LSM3P4-201ENST00000502948 TCP11L2Q8N4U5 519 aa8.83□□□□□ -1
LSM3P4-201ENST00000502948 USP54Q70EL1 1684 aa8.83□□□□□ -1
LSM3P4-201ENST00000502948 PIK3C2AO00443 1686 aa8.82□□□□□ -1
LSM3P4-201ENST00000502948 EN1Q05925 392 aaPredicted RBP8.82□□□□□ -1
LSM3P4-201ENST00000502948 ZNF692Q9BU19 519 aaPredicted RBP8.82□□□□□ -1
LSM3P4-201ENST00000502948 SBNO2Q9Y2G9 1366 aa8.82□□□□□ -1
LSM3P4-201ENST00000502948 EVA1CP58658 441 aa8.81□□□□□ -1
LSM3P4-201ENST00000502948 ZC3H6P61129 1189 aaKnown RBP8.81□□□□□ -1
LSM3P4-201ENST00000502948 SRPK2P78362 688 aaKnown RBP8.81□□□□□ -1
LSM3P4-201ENST00000502948 PDE3BQ13370 1112 aa8.81□□□□□ -1
LSM3P4-201ENST00000502948 CHRNA2Q15822 529 aa8.81□□□□□ -1
LSM3P4-201ENST00000502948 CDCA7Q9BWT1 371 aaPredicted RBP8.81□□□□□ -1
LSM3P4-201ENST00000502948 EVC2Q86UK5 1308 aa8.8□□□□□ -1
LSM3P4-201ENST00000502948 CPSF1Q10570 1443 aaKnown RBP8.8□□□□□ -1
LSM3P4-201ENST00000502948 LRRC37A3O60309 1634 aa8.8□□□□□ -1
LSM3P4-201ENST00000502948 PLEKHG5O94827 1062 aa8.8□□□□□ -1
LSM3P4-201ENST00000502948 LARP1Q6PKG0 1096 aaKnown RBP8.8□□□□□ -1
LSM3P4-201ENST00000502948 STRN4Q9NRL3 753 aa8.8□□□□□ -1
LSM3P4-201ENST00000502948 MON2Q7Z3U7 1717 aa8.8□□□□□ -1
LSM3P4-201ENST00000502948 OVOS2A0A0G2JMS6 1433 aa8.8□□□□□ -1
LSM3P4-201ENST00000502948 OVOS2A0A0J9YW53 1432 aa8.8□□□□□ -1
LSM3P4-201ENST00000502948 OVOS2Q6IE36 1432 aa8.8□□□□□ -1
LSM3P4-201ENST00000502948 TTC21AQ8NDW8 1320 aa8.8□□□□□ -1
LSM3P4-201ENST00000502948 PLSCR1O15162 318 aa8.79□□□□□ -1
LSM3P4-201ENST00000502948 TRIM37O94972 964 aa8.79□□□□□ -1
LSM3P4-201ENST00000502948 EZH2Q15910 746 aaKnown RBP8.79□□□□□ -1
LSM3P4-201ENST00000502948 KCNH5Q8NCM2 988 aa8.79□□□□□ -1
LSM3P4-201ENST00000502948 L3MBTL2Q969R5 705 aa8.79□□□□□ -1
LSM3P4-201ENST00000502948 CABP1Q9NZU7 370 aa8.79□□□□□ -1
LSM3P4-201ENST00000502948 APBA3O96018 575 aa8.78□□□□□ -1
LSM3P4-201ENST00000502948 NLRP6P59044 892 aa8.78□□□□□ -1
LSM3P4-201ENST00000502948 FAM182BQ5T319 152 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms