RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 PMFBP1Q8TBY8 1022 aa9.83□□□□□ -0.84
CPNE4-202ENST00000502818 NINLQ9Y2I6 1382 aa9.83□□□□□ -0.84
CPNE4-202ENST00000502818 BCL11AQ9H165 835 aa9.82□□□□□ -0.84
CPNE4-202ENST00000502818 ADGRB2O60241 1585 aa9.82□□□□□ -0.84
CPNE4-202ENST00000502818 MTHFSP49914 203 aa9.82□□□□□ -0.84
CPNE4-202ENST00000502818 USP32Q8NFA0 1604 aa9.82□□□□□ -0.84
CPNE4-202ENST00000502818 ACEP12821 1306 aa9.81□□□□□ -0.84
CPNE4-202ENST00000502818 PIK3R4Q99570 1358 aa9.81□□□□□ -0.84
CPNE4-202ENST00000502818 LMTK3Q96Q04 1460 aa9.81□□□□□ -0.84
CPNE4-202ENST00000502818 CHD2O14647 1828 aaKnown RBP9.8□□□□□ -0.84
CPNE4-202ENST00000502818 CCDC146Q8IYE0 955 aa9.8□□□□□ -0.84
CPNE4-202ENST00000502818 ZBED9Q6R2W3 1325 aa9.8□□□□□ -0.84
CPNE4-202ENST00000502818 CDC42BPGQ6DT37 1551 aa9.79□□□□□ -0.84
CPNE4-202ENST00000502818 PLEKHG3A1L390 1219 aa9.79□□□□□ -0.84
CPNE4-202ENST00000502818 SOCS7O14512 581 aa9.79□□□□□ -0.84
CPNE4-202ENST00000502818 RGPD8O14715 1765 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-202ENST00000502818 BLMP54132 1417 aaPredicted RBP9.78□□□□□ -0.84
CPNE4-202ENST00000502818 NALCNQ8IZF0 1738 aa9.77□□□□□ -0.84
CPNE4-202ENST00000502818 TOPAZ1Q8N9V7 1692 aa9.77□□□□□ -0.84
CPNE4-202ENST00000502818 EDC4Q6P2E9 1401 aaKnown RBP9.77□□□□□ -0.85
CPNE4-202ENST00000502818 POLR3AO14802 1390 aaPredicted RBP9.77□□□□□ -0.85
CPNE4-202ENST00000502818 NSD2O96028 1365 aa9.77□□□□□ -0.85
CPNE4-202ENST00000502818 TTC21BQ7Z4L5 1316 aa9.77□□□□□ -0.85
CPNE4-202ENST00000502818 GABBR2O75899 941 aa9.77□□□□□ -0.85
CPNE4-202ENST00000502818 WDR43Q15061 677 aaKnown RBP eCLIP9.77□□□□□ -0.85
CPNE4-202ENST00000502818 PROSER2Q86WR7 435 aaPredicted RBP9.76□□□□□ -0.85
CPNE4-202ENST00000502818 CDCA7LQ96GN5 454 aa9.76□□□□□ -0.85
CPNE4-202ENST00000502818 SUPT16HQ9Y5B9 1047 aaKnown RBP9.76□□□□□ -0.85
CPNE4-202ENST00000502818 EMILIN1Q9Y6C2 1016 aa9.76□□□□□ -0.85
CPNE4-202ENST00000502818 STRCP1A6NGW2 1772 aa9.76□□□□□ -0.85
CPNE4-202ENST00000502818 RRS1Q15050 365 aaKnown RBP9.76□□□□□ -0.85
CPNE4-202ENST00000502818 POLKQ9UBT6 870 aa9.76□□□□□ -0.85
CPNE4-202ENST00000502818 USP6P35125 1406 aa9.75□□□□□ -0.85
CPNE4-202ENST00000502818 SSH2Q76I76 1423 aa9.75□□□□□ -0.85
CPNE4-202ENST00000502818 SHPRHQ149N8 1683 aa9.75□□□□□ -0.85
CPNE4-202ENST00000502818 PPM1GO15355 546 aaPredicted RBP9.75□□□□□ -0.85
CPNE4-202ENST00000502818 NUTM2GQ5VZR2 741 aa9.75□□□□□ -0.85
CPNE4-202ENST00000502818 C14orf37Q86TY3 774 aa9.75□□□□□ -0.85
CPNE4-202ENST00000502818 ORAI2Q96SN7 254 aa9.75□□□□□ -0.85
CPNE4-202ENST00000502818 AKAP12Q02952 1782 aa9.75□□□□□ -0.85
CPNE4-202ENST00000502818 MON2Q7Z3U7 1717 aa9.75□□□□□ -0.85
CPNE4-202ENST00000502818 SOX12O15370 315 aa9.74□□□□□ -0.85
CPNE4-202ENST00000502818 NGDNQ8NEJ9 315 aaKnown RBP9.74□□□□□ -0.85
CPNE4-202ENST00000502818 ZNF692Q9BU19 519 aaPredicted RBP9.74□□□□□ -0.85
CPNE4-202ENST00000502818 TSHZ2Q9NRE2 1034 aa9.74□□□□□ -0.85
CPNE4-202ENST00000502818 ADGRL3Q9HAR2 1447 aa9.74□□□□□ -0.85
CPNE4-202ENST00000502818 KIF20BQ96Q89 1820 aa9.74□□□□□ -0.85
CPNE4-202ENST00000502818 COL3A1P02461 1466 aaPredicted RBP9.74□□□□□ -0.85
CPNE4-202ENST00000502818 FMN2Q9NZ56 1722 aa9.74□□□□□ -0.85
CPNE4-202ENST00000502818 APAF1O14727 1248 aa9.74□□□□□ -0.85
CPNE4-202ENST00000502818 NWD1Q149M9 1564 aa9.73□□□□□ -0.85
CPNE4-202ENST00000502818 IRX6P78412 446 aaPredicted RBP9.73□□□□□ -0.85
CPNE4-202ENST00000502818 XPCQ01831 940 aaPredicted RBP9.73□□□□□ -0.85
CPNE4-202ENST00000502818 STRCQ7RTU9 1775 aa9.73□□□□□ -0.85
CPNE4-202ENST00000502818 NRKQ7Z2Y5 1582 aa9.73□□□□□ -0.85
CPNE4-202ENST00000502818 ESCO1Q5FWF5 840 aa9.73□□□□□ -0.85
CPNE4-202ENST00000502818 RRP7AQ9Y3A4 280 aaKnown RBP9.73□□□□□ -0.85
CPNE4-202ENST00000502818 ANKRD26Q9UPS8 1709 aa9.73□□□□□ -0.85
CPNE4-202ENST00000502818 TMEM94Q12767 1356 aa9.73□□□□□ -0.85
CPNE4-202ENST00000502818 ZNF335Q9H4Z2 1342 aaPredicted RBP9.72□□□□□ -0.85
CPNE4-202ENST00000502818 ITSN1Q15811 1721 aa9.72□□□□□ -0.85
CPNE4-202ENST00000502818 DDX17Q92841 729 aaKnown RBP9.72□□□□□ -0.85
CPNE4-202ENST00000502818 COG3Q96JB2 828 aa9.72□□□□□ -0.85
CPNE4-202ENST00000502818 PHF8Q9UPP1 1060 aa9.72□□□□□ -0.85
CPNE4-202ENST00000502818 ANKARQ7Z5J8 1434 aa9.72□□□□□ -0.85
CPNE4-202ENST00000502818 SPINK5Q9NQ38 1064 aaPredicted RBP9.71□□□□□ -0.85
CPNE4-202ENST00000502818 PNPLA6Q8IY17 1366 aa9.71□□□□□ -0.86
CPNE4-202ENST00000502818 U2SURPO15042 1029 aaKnown RBP9.71□□□□□ -0.86
CPNE4-202ENST00000502818 U2AF1L5P0DN76 240 aaPredicted RBP9.71□□□□□ -0.86
CPNE4-202ENST00000502818 U2AF1Q01081 240 aaKnown RBP eCLIP9.71□□□□□ -0.86
CPNE4-202ENST00000502818 OVOS2A0A0J9YW53 1432 aa9.71□□□□□ -0.86
CPNE4-202ENST00000502818 OVOS2Q6IE36 1432 aa9.71□□□□□ -0.86
CPNE4-202ENST00000502818 INSRP06213 1382 aa9.7□□□□□ -0.86
CPNE4-202ENST00000502818 FOXO3O43524 673 aa9.7□□□□□ -0.86
CPNE4-202ENST00000502818 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
CPNE4-202ENST00000502818 PLEKHG5O94827 1062 aa9.7□□□□□ -0.86
CPNE4-202ENST00000502818 CFAP53Q96M91 514 aa9.7□□□□□ -0.86
CPNE4-202ENST00000502818 SMG6Q86US8 1419 aaKnown RBP9.7□□□□□ -0.86
CPNE4-202ENST00000502818 ZNF521Q96K83 1311 aa9.7□□□□□ -0.86
CPNE4-202ENST00000502818 FKBP8Q14318 412 aa9.7□□□□□ -0.86
CPNE4-202ENST00000502818 NEUROD2Q15784 382 aa9.7□□□□□ -0.86
CPNE4-202ENST00000502818 ILDR2Q71H61 639 aa9.7□□□□□ -0.86
CPNE4-202ENST00000502818 NUDCQ9Y266 331 aa9.7□□□□□ -0.86
CPNE4-202ENST00000502818 DIAPH1O60610 1272 aaKnown RBP9.68□□□□□ -0.86
CPNE4-202ENST00000502818 IL13P35225 146 aa9.68□□□□□ -0.86
CPNE4-202ENST00000502818 PLEKHF1Q96S99 279 aa9.68□□□□□ -0.86
CPNE4-202ENST00000502818 C19orf44Q9H6X5 657 aa9.68□□□□□ -0.86
CPNE4-202ENST00000502818 MAP2P11137 1827 aaKnown RBP9.68□□□□□ -0.86
CPNE4-202ENST00000502818 PIK3C2AO00443 1686 aa9.68□□□□□ -0.86
CPNE4-202ENST00000502818 HMOX1P09601 288 aa9.68□□□□□ -0.86
CPNE4-202ENST00000502818 NLRP6P59044 892 aa9.68□□□□□ -0.86
CPNE4-202ENST00000502818 TCP11L2Q8N4U5 519 aa9.68□□□□□ -0.86
CPNE4-202ENST00000502818 C1orf167Q5SNV9 1468 aa9.68□□□□□ -0.86
CPNE4-202ENST00000502818 AATKQ6ZMQ8 1374 aa9.68□□□□□ -0.86
CPNE4-202ENST00000502818 HSP90AB2PQ58FF8 381 aa9.67□□□□□ -0.86
CPNE4-202ENST00000502818 ABTB2Q8N961 1025 aa9.67□□□□□ -0.86
CPNE4-202ENST00000502818 RUNDC1Q96C34 613 aa9.67□□□□□ -0.86
CPNE4-202ENST00000502818 USP31Q70CQ4 1352 aa9.67□□□□□ -0.86
CPNE4-202ENST00000502818 MAP3K19Q56UN5 1328 aa9.66□□□□□ -0.86
CPNE4-202ENST00000502818 TTC21AQ8NDW8 1320 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms