RNA–Protein interactions for RNA: ENST00000502706.1

RFC1-204, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-204ENST00000502706 TRAK2O60296 914 aa9.9□□□□□ -0.82
RFC1-204ENST00000502706 ALDH1A1P00352 501 aa9.9□□□□□ -0.82
RFC1-204ENST00000502706 CCDC24Q8N4L8 307 aa9.89□□□□□ -0.83
RFC1-204ENST00000502706 SHROOM4Q9ULL8 1493 aa9.88□□□□□ -0.83
RFC1-204ENST00000502706 PLEKHG3A1L390 1219 aa9.87□□□□□ -0.83
RFC1-204ENST00000502706 TRAIPQ9BWF2 469 aa9.87□□□□□ -0.83
RFC1-204ENST00000502706 H3BM21 787 aa9.86□□□□□ -0.83
RFC1-204ENST00000502706 CD46P15529 392 aa9.86□□□□□ -0.83
RFC1-204ENST00000502706 BMP1P13497 986 aa9.85□□□□□ -0.83
RFC1-204ENST00000502706 TRIM46Q7Z4K8 759 aa9.85□□□□□ -0.83
RFC1-204ENST00000502706 CAPN5O15484 640 aaPredicted RBP9.84□□□□□ -0.83
RFC1-204ENST00000502706 KDM4AO75164 1064 aa9.84□□□□□ -0.83
RFC1-204ENST00000502706 CLUAP1Q96AJ1 413 aa9.84□□□□□ -0.83
RFC1-204ENST00000502706 GOPCQ9HD26 462 aa9.84□□□□□ -0.83
RFC1-204ENST00000502706 ZCCHC6Q5VYS8 1495 aaKnown RBP9.84□□□□□ -0.83
RFC1-204ENST00000502706 CC2D2AQ9P2K1 1620 aa9.83□□□□□ -0.84
RFC1-204ENST00000502706 SIAH2O43255 324 aa9.83□□□□□ -0.84
RFC1-204ENST00000502706 RAD21O60216 631 aa9.83□□□□□ -0.84
RFC1-204ENST00000502706 USP46P62068 366 aa9.83□□□□□ -0.84
RFC1-204ENST00000502706 DCAF1Q9Y4B6 1507 aa9.82□□□□□ -0.84
RFC1-204ENST00000502706 VEGFBP49765 207 aa9.82□□□□□ -0.84
RFC1-204ENST00000502706 EHBP1Q8NDI1 1231 aa9.82□□□□□ -0.84
RFC1-204ENST00000502706 WASF2Q9Y6W5 498 aa9.82□□□□□ -0.84
RFC1-204ENST00000502706 CECR2Q9BXF3 1484 aa9.82□□□□□ -0.84
RFC1-204ENST00000502706 ERBB4Q15303 1308 aa9.82□□□□□ -0.84
RFC1-204ENST00000502706 MINK1Q8N4C8 1332 aaPredicted RBP9.82□□□□□ -0.84
RFC1-204ENST00000502706 SCRIBQ14160 1630 aa9.8□□□□□ -0.84
RFC1-204ENST00000502706 JUNDP17535 347 aa9.79□□□□□ -0.84
RFC1-204ENST00000502706 AEBP1Q8IUX7 1158 aa9.79□□□□□ -0.84
RFC1-204ENST00000502706 CCDC97Q96F63 343 aaPredicted RBP9.78□□□□□ -0.84
RFC1-204ENST00000502706 SERPINA10Q9UK55 444 aa9.78□□□□□ -0.84
RFC1-204ENST00000502706 EIF4G1Q04637 1599 aaKnown RBP9.77□□□□□ -0.85
RFC1-204ENST00000502706 HOXA2O43364 376 aa9.77□□□□□ -0.85
RFC1-204ENST00000502706 AMHR2Q16671 573 aa9.77□□□□□ -0.85
RFC1-204ENST00000502706 HLA-CQ95604 372 aa9.77□□□□□ -0.85
RFC1-204ENST00000502706 PCMTD1Q96MG8 357 aaPredicted RBP9.77□□□□□ -0.85
RFC1-204ENST00000502706 TMCO4Q5TGY1 634 aa9.76□□□□□ -0.85
RFC1-204ENST00000502706 PARP9Q8IXQ6 854 aa9.76□□□□□ -0.85
RFC1-204ENST00000502706 ZFP42Q96MM3 310 aa9.76□□□□□ -0.85
RFC1-204ENST00000502706 NUDT12Q9BQG2 462 aa9.76□□□□□ -0.85
RFC1-204ENST00000502706 MAP2K5Q13163 448 aa9.75□□□□□ -0.85
RFC1-204ENST00000502706 CCDC102AQ96A19 550 aa9.75□□□□□ -0.85
RFC1-204ENST00000502706 ZNF777Q9ULD5 760 aaPredicted RBP9.75□□□□□ -0.85
RFC1-204ENST00000502706 SUZ12Q15022 739 aaKnown RBP9.74□□□□□ -0.85
RFC1-204ENST00000502706 PTCRAQ6ISU1 281 aaPredicted RBP9.74□□□□□ -0.85
RFC1-204ENST00000502706 PROSER2Q86WR7 435 aaPredicted RBP9.74□□□□□ -0.85
RFC1-204ENST00000502706 RGS22Q8NE09 1264 aa9.74□□□□□ -0.85
RFC1-204ENST00000502706 IRF6O14896 467 aa9.73□□□□□ -0.85
RFC1-204ENST00000502706 MCM6Q14566 821 aa9.73□□□□□ -0.85
RFC1-204ENST00000502706 VSIG8P0DPA2 414 aa9.72□□□□□ -0.85
RFC1-204ENST00000502706 SH3BP2P78314 561 aa9.72□□□□□ -0.85
RFC1-204ENST00000502706 RETREG3Q86VR2 466 aa9.72□□□□□ -0.85
RFC1-204ENST00000502706 GUCA2AQ02747 115 aa9.7□□□□□ -0.86
RFC1-204ENST00000502706 SYMPKQ92797 1274 aaKnown RBP9.7□□□□□ -0.86
RFC1-204ENST00000502706 MTMR7Q9Y216 660 aa9.7□□□□□ -0.86
RFC1-204ENST00000502706 LOC105371045A0A1W2PR82 267 aa9.69□□□□□ -0.86
RFC1-204ENST00000502706 SCARF1Q14162 830 aa9.69□□□□□ -0.86
RFC1-204ENST00000502706 TTLL12Q14166 644 aaPredicted RBP9.69□□□□□ -0.86
RFC1-204ENST00000502706 MRPL14Q6P1L8 145 aaKnown RBP9.69□□□□□ -0.86
RFC1-204ENST00000502706 CCNYL3P0C7X3 344 aa9.68□□□□□ -0.86
RFC1-204ENST00000502706 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
RFC1-204ENST00000502706 KCNMA1Q12791 1236 aa9.68□□□□□ -0.86
RFC1-204ENST00000502706 MFAP1P55081 439 aaKnown RBP9.67□□□□□ -0.86
RFC1-204ENST00000502706 MPNDQ8N594 471 aa9.67□□□□□ -0.86
RFC1-204ENST00000502706 GZF1Q9H116 711 aaPredicted RBP9.67□□□□□ -0.86
RFC1-204ENST00000502706 TLL2Q9Y6L7 1015 aa9.67□□□□□ -0.86
RFC1-204ENST00000502706 NNTQ13423 1086 aa9.66□□□□□ -0.86
RFC1-204ENST00000502706 MS4A1P11836 297 aa9.65□□□□□ -0.86
RFC1-204ENST00000502706 VARSP26640 1264 aaKnown RBP9.65□□□□□ -0.86
RFC1-204ENST00000502706 FNBP4Q8N3X1 1017 aaPredicted RBP9.65□□□□□ -0.86
RFC1-204ENST00000502706 RETREG2Q8NC44 543 aa9.65□□□□□ -0.86
RFC1-204ENST00000502706 PURBQ96QR8 312 aaKnown RBP9.65□□□□□ -0.86
RFC1-204ENST00000502706 ADH1CP00326 375 aa9.64□□□□□ -0.87
RFC1-204ENST00000502706 UNC93B1Q9H1C4 597 aa9.64□□□□□ -0.87
RFC1-204ENST00000502706 TIMP2P16035 220 aa9.63□□□□□ -0.87
RFC1-204ENST00000502706 RBM25P49756 843 aaKnown RBP9.63□□□□□ -0.87
RFC1-204ENST00000502706 PTPRNQ16849 979 aa9.63□□□□□ -0.87
RFC1-204ENST00000502706 NUTM1Q86Y26 1132 aa9.63□□□□□ -0.87
RFC1-204ENST00000502706 EVA1BQ9NVM1 165 aa9.63□□□□□ -0.87
RFC1-204ENST00000502706 SOBPA7XYQ1 873 aa9.62□□□□□ -0.87
RFC1-204ENST00000502706 GSK3AP49840 483 aa9.62□□□□□ -0.87
RFC1-204ENST00000502706 WDR4P57081 412 aaKnown RBP9.62□□□□□ -0.87
RFC1-204ENST00000502706 LINC01559Q495D7 138 aa9.62□□□□□ -0.87
RFC1-204ENST00000502706 SH3D19Q5HYK7 790 aa9.62□□□□□ -0.87
RFC1-204ENST00000502706 BAP1Q92560 729 aa9.62□□□□□ -0.87
RFC1-204ENST00000502706 C6orf229H3BNL8 230 aa9.61□□□□□ -0.87
RFC1-204ENST00000502706 PDE4CQ08493 712 aa9.61□□□□□ -0.87
RFC1-204ENST00000502706 IGSF3O75054 1194 aa9.6□□□□□ -0.87
RFC1-204ENST00000502706 FDX1P10109 184 aa9.6□□□□□ -0.87
RFC1-204ENST00000502706 FOXD4L5Q5VV16 416 aaPredicted RBP9.6□□□□□ -0.87
RFC1-204ENST00000502706 GIGYF2Q6Y7W6 1299 aaKnown RBP9.6□□□□□ -0.87
RFC1-204ENST00000502706 ZNF511Q8NB15 262 aa9.6□□□□□ -0.87
RFC1-204ENST00000502706 FOXD4L4Q8WXT5 416 aaPredicted RBP9.6□□□□□ -0.87
RFC1-204ENST00000502706 POM121Q96HA1 1249 aa9.6□□□□□ -0.87
RFC1-204ENST00000502706 GPCPD1Q9NPB8 672 aa9.6□□□□□ -0.87
RFC1-204ENST00000502706 FAM217BQ9NTX9 383 aaPredicted RBP9.6□□□□□ -0.87
RFC1-204ENST00000502706 CLCN1P35523 988 aa9.59□□□□□ -0.87
RFC1-204ENST00000502706 KCNH2Q12809 1159 aa9.59□□□□□ -0.87
RFC1-204ENST00000502706 KLF16Q9BXK1 252 aaPredicted RBP9.59□□□□□ -0.87
RFC1-204ENST00000502706 PCDHGC3Q9UN70 934 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms