RNA–Protein interactions for RNA: ENST00000502604.5

CDK7-202, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-202ENST00000502604 QRICH2Q9H0J4 1663 aa17.14■□□□□ 0.33
CDK7-202ENST00000502604 NRAPQ86VF7 1730 aa17.14■□□□□ 0.33
CDK7-202ENST00000502604 NGDNQ8NEJ9 315 aaKnown RBP17.13■□□□□ 0.33
CDK7-202ENST00000502604 ATAD2Q6PL18 1390 aa17.13■□□□□ 0.33
CDK7-202ENST00000502604 SRCAPQ6ZRS2 3230 aa17.13■□□□□ 0.33
CDK7-202ENST00000502604 TRPM1Q7Z4N2 1603 aa17.13■□□□□ 0.33
CDK7-202ENST00000502604 NUDT16Q96DE0 195 aaKnown RBP17.12■□□□□ 0.33
CDK7-202ENST00000502604 L3MBTL2Q969R5 705 aa17.12■□□□□ 0.33
CDK7-202ENST00000502604 SIN3AQ96ST3 1273 aa17.12■□□□□ 0.33
CDK7-202ENST00000502604 CDK19Q9BWU1 502 aa17.12■□□□□ 0.33
CDK7-202ENST00000502604 COL14A1Q05707 1796 aaKnown RBP17.1■□□□□ 0.33
CDK7-202ENST00000502604 PHRF1Q9P1Y6 1649 aaKnown RBP17.1■□□□□ 0.33
CDK7-202ENST00000502604 PAK3O75914 559 aaPredicted RBP17.1■□□□□ 0.33
CDK7-202ENST00000502604 FAM83GA6ND36 823 aa17.09■□□□□ 0.33
CDK7-202ENST00000502604 NEUROD1Q13562 356 aa17.07■□□□□ 0.32
CDK7-202ENST00000502604 VPS72Q15906 364 aa17.07■□□□□ 0.32
CDK7-202ENST00000502604 CENPJQ9HC77 1338 aaPredicted RBP17.07■□□□□ 0.32
CDK7-202ENST00000502604 POLR3AO14802 1390 aaPredicted RBP17.06■□□□□ 0.32
CDK7-202ENST00000502604 ACEP12821 1306 aa17.06■□□□□ 0.32
CDK7-202ENST00000502604 CCDC61Q9Y6R9 512 aa17.05■□□□□ 0.32
CDK7-202ENST00000502604 PCGF6Q9BYE7 350 aa17.05■□□□□ 0.32
CDK7-202ENST00000502604 CCDC9Q9Y3X0 531 aaKnown RBP17.05■□□□□ 0.32
CDK7-202ENST00000502604 BTG4Q9NY30 223 aa17.04■□□□□ 0.32
CDK7-202ENST00000502604 PPIP5K1Q6PFW1 1433 aa17.03■□□□□ 0.32
CDK7-202ENST00000502604 SRPK2P78362 688 aaKnown RBP17.03■□□□□ 0.32
CDK7-202ENST00000502604 NBPF8Q3BBV2 869 aa17.03■□□□□ 0.32
CDK7-202ENST00000502604 PLEKHG3A1L390 1219 aa17.02■□□□□ 0.32
CDK7-202ENST00000502604 NUTM2GQ5VZR2 741 aa17.02■□□□□ 0.32
CDK7-202ENST00000502604 SEPT12Q8IYM1 358 aa17.02■□□□□ 0.32
CDK7-202ENST00000502604 CABP2Q9NPB3 220 aa17.02■□□□□ 0.32
CDK7-202ENST00000502604 NRKQ7Z2Y5 1582 aa17.02■□□□□ 0.31
CDK7-202ENST00000502604 ROCK2O75116 1388 aaKnown RBP17.01■□□□□ 0.31
CDK7-202ENST00000502604 KIAA0232Q92628 1395 aa17.01■□□□□ 0.31
CDK7-202ENST00000502604 PRDM11Q9NQV5 511 aa17■□□□□ 0.31
CDK7-202ENST00000502604 ONECUT3O60422 494 aaPredicted RBP16.99■□□□□ 0.31
CDK7-202ENST00000502604 HOXD11P31277 338 aaPredicted RBP16.98■□□□□ 0.31
CDK7-202ENST00000502604 CHRNA2Q15822 529 aa16.98■□□□□ 0.31
CDK7-202ENST00000502604 FAM98CQ17RN3 349 aaKnown RBP16.98■□□□□ 0.31
CDK7-202ENST00000502604 THSD7AQ9UPZ6 1657 aa16.97■□□□□ 0.31
CDK7-202ENST00000502604 ZC3H6P61129 1189 aaKnown RBP16.97■□□□□ 0.31
CDK7-202ENST00000502604 ABTB2Q8N961 1025 aa16.97■□□□□ 0.31
CDK7-202ENST00000502604 AKAP12Q02952 1782 aa16.96■□□□□ 0.31
CDK7-202ENST00000502604 A0A0G2JS52 829 aa16.96■□□□□ 0.31
CDK7-202ENST00000502604 MYT1Q01538 1121 aa16.96■□□□□ 0.31
CDK7-202ENST00000502604 LMO7Q8WWI1 1683 aa16.96■□□□□ 0.3
CDK7-202ENST00000502604 BLMP54132 1417 aaPredicted RBP16.95■□□□□ 0.3
CDK7-202ENST00000502604 SPATA31A5Q5VU36 1347 aa16.95■□□□□ 0.3
CDK7-202ENST00000502604 SPATA31A7Q8IWB4 1347 aa16.95■□□□□ 0.3
CDK7-202ENST00000502604 KRT27Q7Z3Y8 459 aa16.95■□□□□ 0.3
CDK7-202ENST00000502604 CCDC125Q86Z20 511 aa16.95■□□□□ 0.3
CDK7-202ENST00000502604 CABP1Q9NZU7 370 aa16.95■□□□□ 0.3
CDK7-202ENST00000502604 PIK3C2AO00443 1686 aa16.95■□□□□ 0.3
CDK7-202ENST00000502604 USP6P35125 1406 aa16.95■□□□□ 0.3
CDK7-202ENST00000502604 USP19O94966 1318 aa16.94■□□□□ 0.3
CDK7-202ENST00000502604 EVC2Q86UK5 1308 aa16.94■□□□□ 0.3
CDK7-202ENST00000502604 NCBP3Q53F19 620 aaKnown RBP16.94■□□□□ 0.3
CDK7-202ENST00000502604 CAMTA1Q9Y6Y1 1673 aa16.93■□□□□ 0.3
CDK7-202ENST00000502604 STRN4Q9NRL3 753 aa16.93■□□□□ 0.3
CDK7-202ENST00000502604 RNF216Q9NWF9 866 aaPredicted RBP16.93■□□□□ 0.3
CDK7-202ENST00000502604 SSH2Q76I76 1423 aa16.91■□□□□ 0.3
CDK7-202ENST00000502604 BRD4O60885 1362 aaPredicted RBP16.9■□□□□ 0.3
CDK7-202ENST00000502604 CPDO75976 1380 aa16.9■□□□□ 0.3
CDK7-202ENST00000502604 SPATA31A1Q5TZJ5 1347 aa16.9■□□□□ 0.3
CDK7-202ENST00000502604 DEFB132Q7Z7B7 95 aa16.9■□□□□ 0.3
CDK7-202ENST00000502604 NLRP13Q86W25 1043 aa16.9■□□□□ 0.3
CDK7-202ENST00000502604 SLIT3O75094 1523 aa16.9■□□□□ 0.3
CDK7-202ENST00000502604 TONSLQ96HA7 1378 aa16.9■□□□□ 0.3
CDK7-202ENST00000502604 RGPD1P0DJD0 1748 aa16.89■□□□□ 0.29
CDK7-202ENST00000502604 MON2Q7Z3U7 1717 aa16.89■□□□□ 0.29
CDK7-202ENST00000502604 GCP02774 474 aa16.89■□□□□ 0.29
CDK7-202ENST00000502604 FAM182BQ5T319 152 aa16.89■□□□□ 0.29
CDK7-202ENST00000502604 TNS1Q9HBL0 1735 aaKnown RBP16.87■□□□□ 0.29
CDK7-202ENST00000502604 NLRP6P59044 892 aa16.87■□□□□ 0.29
CDK7-202ENST00000502604 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
CDK7-202ENST00000502604 USP35Q9P2H5 1018 aa16.87■□□□□ 0.29
CDK7-202ENST00000502604 SF3B2Q13435 895 aaKnown RBP16.86■□□□□ 0.29
CDK7-202ENST00000502604 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
CDK7-202ENST00000502604 SBNO2Q9Y2G9 1366 aa16.86■□□□□ 0.29
CDK7-202ENST00000502604 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
CDK7-202ENST00000502604 COL18A1P39060 1754 aa16.86■□□□□ 0.29
CDK7-202ENST00000502604 RGPD5Q99666 1765 aa16.86■□□□□ 0.29
CDK7-202ENST00000502604 EVA1CP58658 441 aa16.86■□□□□ 0.29
CDK7-202ENST00000502604 LARP1Q6PKG0 1096 aaKnown RBP16.86■□□□□ 0.29
CDK7-202ENST00000502604 CPSF1Q10570 1443 aaKnown RBP16.85■□□□□ 0.29
CDK7-202ENST00000502604 ZBTB7CA1YPR0 619 aa16.84■□□□□ 0.29
CDK7-202ENST00000502604 TTC21BQ7Z4L5 1316 aa16.84■□□□□ 0.29
CDK7-202ENST00000502604 PARP4Q9UKK3 1724 aaKnown RBP16.83■□□□□ 0.28
CDK7-202ENST00000502604 ZNF692Q9BU19 519 aaPredicted RBP16.82■□□□□ 0.28
CDK7-202ENST00000502604 WNK3Q9BYP7 1800 aa16.82■□□□□ 0.28
CDK7-202ENST00000502604 KTN1Q86UP2 1357 aaKnown RBP16.82■□□□□ 0.28
CDK7-202ENST00000502604 BARGINQ6ZT62 677 aa16.81■□□□□ 0.28
CDK7-202ENST00000502604 CD163L1Q9NR16 1453 aa16.81■□□□□ 0.28
CDK7-202ENST00000502604 AATKQ6ZMQ8 1374 aa16.81■□□□□ 0.28
CDK7-202ENST00000502604 TCP11L2Q8N4U5 519 aa16.8■□□□□ 0.28
CDK7-202ENST00000502604 NFAT5O94916 1531 aa16.8■□□□□ 0.28
CDK7-202ENST00000502604 CRB1P82279 1406 aa16.8■□□□□ 0.28
CDK7-202ENST00000502604 USP54Q70EL1 1684 aa16.8■□□□□ 0.28
CDK7-202ENST00000502604 SOX12O15370 315 aa16.8■□□□□ 0.28
CDK7-202ENST00000502604 BAG6P46379 1132 aa16.8■□□□□ 0.28
CDK7-202ENST00000502604 TTC21AQ8NDW8 1320 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms