RNA–Protein interactions for RNA: ENST00000502555.5

SGCA-203, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,349 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-203ENST00000502555 TTC21BQ7Z4L5 1316 aa18.2■□□□□ 0.5
SGCA-203ENST00000502555 TTC21AQ8NDW8 1320 aa18.2■□□□□ 0.5
SGCA-203ENST00000502555 GGNBP2Q9H3C7 697 aa18.2■□□□□ 0.5
SGCA-203ENST00000502555 RGPD8O14715 1765 aaPredicted RBP18.19■□□□□ 0.5
SGCA-203ENST00000502555 ESCO1Q5FWF5 840 aa18.19■□□□□ 0.5
SGCA-203ENST00000502555 SCAF1Q9H7N4 1312 aaKnown RBP18.19■□□□□ 0.5
SGCA-203ENST00000502555 KIF1AQ12756 1690 aa18.18■□□□□ 0.5
SGCA-203ENST00000502555 NME9Q86XW9 330 aa18.17■□□□□ 0.5
SGCA-203ENST00000502555 PNISRQ8TF01 805 aaKnown RBP18.17■□□□□ 0.5
SGCA-203ENST00000502555 YTHDC1Q96MU7 727 aaKnown RBP18.17■□□□□ 0.5
SGCA-203ENST00000502555 XIRP1Q702N8 1843 aaKnown RBP18.16■□□□□ 0.5
SGCA-203ENST00000502555 OVOS2A0A0J9YW53 1432 aa18.15■□□□□ 0.5
SGCA-203ENST00000502555 OVOS2Q6IE36 1432 aa18.15■□□□□ 0.5
SGCA-203ENST00000502555 COG3Q96JB2 828 aa18.15■□□□□ 0.5
SGCA-203ENST00000502555 USP31Q70CQ4 1352 aa18.14■□□□□ 0.49
SGCA-203ENST00000502555 INSRP06213 1382 aa18.13■□□□□ 0.49
SGCA-203ENST00000502555 AATKQ6ZMQ8 1374 aa18.13■□□□□ 0.49
SGCA-203ENST00000502555 TNNT2P45379 298 aaPredicted RBP18.13■□□□□ 0.49
SGCA-203ENST00000502555 FAM9BQ8IZU0 186 aa18.13■□□□□ 0.49
SGCA-203ENST00000502555 ORAI2Q96SN7 254 aa18.13■□□□□ 0.49
SGCA-203ENST00000502555 LTBP4Q8N2S1 1624 aa18.11■□□□□ 0.49
SGCA-203ENST00000502555 PSME1Q06323 249 aa18.11■□□□□ 0.49
SGCA-203ENST00000502555 CFAP53Q96M91 514 aa18.11■□□□□ 0.49
SGCA-203ENST00000502555 MTHFSP49914 203 aa18.1■□□□□ 0.49
SGCA-203ENST00000502555 PIK3C2AO00443 1686 aa18.09■□□□□ 0.49
SGCA-203ENST00000502555 USP54Q70EL1 1684 aa18.09■□□□□ 0.49
SGCA-203ENST00000502555 ZRANB1Q9UGI0 708 aa18.09■□□□□ 0.49
SGCA-203ENST00000502555 SMG6Q86US8 1419 aaKnown RBP18.09■□□□□ 0.49
SGCA-203ENST00000502555 FOXO3O43524 673 aa18.08■□□□□ 0.49
SGCA-203ENST00000502555 NPHP3Q7Z494 1330 aa18.07■□□□□ 0.48
SGCA-203ENST00000502555 CENPBP07199 599 aaPredicted RBP18.07■□□□□ 0.48
SGCA-203ENST00000502555 WDR43Q15061 677 aaKnown RBP eCLIP18.07■□□□□ 0.48
SGCA-203ENST00000502555 SLAIN2Q9P270 581 aa18.06■□□□□ 0.48
SGCA-203ENST00000502555 PNPLA6Q8IY17 1366 aa18.06■□□□□ 0.48
SGCA-203ENST00000502555 PAK3O75914 559 aaPredicted RBP18.05■□□□□ 0.48
SGCA-203ENST00000502555 ABTB2Q8N961 1025 aa18.05■□□□□ 0.48
SGCA-203ENST00000502555 POLKQ9UBT6 870 aa18.05■□□□□ 0.48
SGCA-203ENST00000502555 CDK12Q9NYV4 1490 aaPredicted RBP18.05■□□□□ 0.48
SGCA-203ENST00000502555 BLMP54132 1417 aaPredicted RBP18.05■□□□□ 0.48
SGCA-203ENST00000502555 NLRP6P59044 892 aa18.04■□□□□ 0.48
SGCA-203ENST00000502555 BRINP3Q76B58 766 aa18.04■□□□□ 0.48
SGCA-203ENST00000502555 KRT28Q7Z3Y7 464 aa18.04■□□□□ 0.48
SGCA-203ENST00000502555 SBNO1A3KN83 1393 aa18.04■□□□□ 0.48
SGCA-203ENST00000502555 COL3A1P02461 1466 aaPredicted RBP18.04■□□□□ 0.48
SGCA-203ENST00000502555 TRPM3Q9HCF6 1732 aaPredicted RBP18.04■□□□□ 0.48
SGCA-203ENST00000502555 HNRNPUQ00839 825 aaKnown RBP eCLIP18.03■□□□□ 0.48
SGCA-203ENST00000502555 PXDNQ92626 1479 aa18.02■□□□□ 0.47
SGCA-203ENST00000502555 SHPRHQ149N8 1683 aa18■□□□□ 0.47
SGCA-203ENST00000502555 ADAMTS8Q9UP79 889 aa18■□□□□ 0.47
SGCA-203ENST00000502555 KIF24Q5T7B8 1368 aa18■□□□□ 0.47
SGCA-203ENST00000502555 XPCQ01831 940 aaPredicted RBP17.99■□□□□ 0.47
SGCA-203ENST00000502555 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
SGCA-203ENST00000502555 MARF1Q9Y4F3 1742 aaKnown RBP17.99■□□□□ 0.47
SGCA-203ENST00000502555 EMILIN1Q9Y6C2 1016 aa17.99■□□□□ 0.47
SGCA-203ENST00000502555 TNS3Q68CZ2 1445 aa17.99■□□□□ 0.47
SGCA-203ENST00000502555 USP19O94966 1318 aa17.98■□□□□ 0.47
SGCA-203ENST00000502555 ZBED9Q6R2W3 1325 aa17.98■□□□□ 0.47
SGCA-203ENST00000502555 DIAPH1O60610 1272 aaKnown RBP17.98■□□□□ 0.47
SGCA-203ENST00000502555 RRS1Q15050 365 aaKnown RBP17.98■□□□□ 0.47
SGCA-203ENST00000502555 ILDR1Q86SU0 546 aaPredicted RBP17.98■□□□□ 0.47
SGCA-203ENST00000502555 KCNH5Q8NCM2 988 aa17.98■□□□□ 0.47
SGCA-203ENST00000502555 ALS2Q96Q42 1657 aa17.97■□□□□ 0.47
SGCA-203ENST00000502555 SLIT3O75094 1523 aa17.97■□□□□ 0.47
SGCA-203ENST00000502555 ARHGEF10O15013 1369 aa17.97■□□□□ 0.47
SGCA-203ENST00000502555 PPM1GO15355 546 aaPredicted RBP17.97■□□□□ 0.47
SGCA-203ENST00000502555 FBLN1P23142 703 aa17.97■□□□□ 0.47
SGCA-203ENST00000502555 NUTM2GQ5VZR2 741 aa17.97■□□□□ 0.47
SGCA-203ENST00000502555 SOS2Q07890 1332 aaPredicted RBP17.96■□□□□ 0.47
SGCA-203ENST00000502555 NFAT5O94916 1531 aa17.96■□□□□ 0.47
SGCA-203ENST00000502555 MAP3K19Q56UN5 1328 aa17.95■□□□□ 0.46
SGCA-203ENST00000502555 RTL1A6NKG5 1358 aa17.95■□□□□ 0.46
SGCA-203ENST00000502555 FLT4P35916 1363 aa17.95■□□□□ 0.46
SGCA-203ENST00000502555 IQSEC2Q5JU85 1478 aa17.95■□□□□ 0.46
SGCA-203ENST00000502555 MAP2P11137 1827 aaKnown RBP17.95■□□□□ 0.46
SGCA-203ENST00000502555 SPATA31A3Q5VYP0 1347 aa17.95■□□□□ 0.46
SGCA-203ENST00000502555 NHSL1Q5SYE7 1610 aa17.94■□□□□ 0.46
SGCA-203ENST00000502555 DDX17Q92841 729 aaKnown RBP17.94■□□□□ 0.46
SGCA-203ENST00000502555 MED1Q15648 1581 aaPredicted RBP17.93■□□□□ 0.46
SGCA-203ENST00000502555 SOX12O15370 315 aa17.93■□□□□ 0.46
SGCA-203ENST00000502555 U2AF1L5P0DN76 240 aaPredicted RBP17.93■□□□□ 0.46
SGCA-203ENST00000502555 U2AF1Q01081 240 aaKnown RBP eCLIP17.93■□□□□ 0.46
SGCA-203ENST00000502555 LMOD2Q6P5Q4 547 aa17.93■□□□□ 0.46
SGCA-203ENST00000502555 IL13P35225 146 aa17.92■□□□□ 0.46
SGCA-203ENST00000502555 PEAK1Q9H792 1746 aa17.92■□□□□ 0.46
SGCA-203ENST00000502555 U2SURPO15042 1029 aaKnown RBP17.91■□□□□ 0.46
SGCA-203ENST00000502555 GCP02774 474 aa17.91■□□□□ 0.46
SGCA-203ENST00000502555 AMPHP49418 695 aa17.91■□□□□ 0.46
SGCA-203ENST00000502555 AHDC1Q5TGY3 1603 aaPredicted RBP17.9■□□□□ 0.46
SGCA-203ENST00000502555 PHRF1Q9P1Y6 1649 aaKnown RBP17.9■□□□□ 0.46
SGCA-203ENST00000502555 NGEFQ8N5V2 710 aa17.9■□□□□ 0.46
SGCA-203ENST00000502555 PNNQ9H307 717 aaKnown RBP17.9■□□□□ 0.46
SGCA-203ENST00000502555 RUNDC1Q96C34 613 aa17.89■□□□□ 0.45
SGCA-203ENST00000502555 ROBO1Q9Y6N7 1651 aa17.89■□□□□ 0.45
SGCA-203ENST00000502555 TOM1O60784 492 aa17.88■□□□□ 0.45
SGCA-203ENST00000502555 HOXC9P31274 260 aa17.88■□□□□ 0.45
SGCA-203ENST00000502555 EIF4A2Q14240 407 aaKnown RBP17.88■□□□□ 0.45
SGCA-203ENST00000502555 FCHSD2O94868 740 aa17.87■□□□□ 0.45
SGCA-203ENST00000502555 HSP90AB2PQ58FF8 381 aa17.87■□□□□ 0.45
SGCA-203ENST00000502555 ARHGEF25Q86VW2 580 aa17.87■□□□□ 0.45
SGCA-203ENST00000502555 CCDC146Q8IYE0 955 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms