RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 BMS1Q14692 1282 aaKnown RBP5□□□□□ -1.61
SUB1-202ENST00000502453 FAN1Q9Y2M0 1017 aa5□□□□□ -1.61
SUB1-202ENST00000502453 PSME1Q06323 249 aa5□□□□□ -1.61
SUB1-202ENST00000502453 TSC1Q92574 1164 aa5□□□□□ -1.61
SUB1-202ENST00000502453 SECISBP2LQ93073 1101 aaKnown RBP5□□□□□ -1.61
SUB1-202ENST00000502453 ALG2Q9H553 416 aa5□□□□□ -1.61
SUB1-202ENST00000502453 DMGDHQ9UI17 866 aaKnown RBP5□□□□□ -1.61
SUB1-202ENST00000502453 VAMP1P23763 118 aa5□□□□□ -1.61
SUB1-202ENST00000502453 SALL2Q9Y467 1007 aaPredicted RBP5□□□□□ -1.61
SUB1-202ENST00000502453 C7P10643 843 aa4.99□□□□□ -1.61
SUB1-202ENST00000502453 SSFA2P28290 1259 aa4.99□□□□□ -1.61
SUB1-202ENST00000502453 SEMA3FQ13275 785 aa4.99□□□□□ -1.61
SUB1-202ENST00000502453 ZNF211Q13398 564 aaPredicted RBP4.99□□□□□ -1.61
SUB1-202ENST00000502453 CCDC146Q8IYE0 955 aa4.99□□□□□ -1.61
SUB1-202ENST00000502453 CDHR5Q9HBB8 845 aa4.99□□□□□ -1.61
SUB1-202ENST00000502453 FAM161BQ96MY7 647 aa4.99□□□□□ -1.61
SUB1-202ENST00000502453 H3BRB1 525 aa4.99□□□□□ -1.61
SUB1-202ENST00000502453 GOLGA2Q08379 1002 aa4.99□□□□□ -1.61
SUB1-202ENST00000502453 TUT1Q9H6E5 874 aaKnown RBP4.99□□□□□ -1.61
SUB1-202ENST00000502453 TNNI2P48788 182 aa4.98□□□□□ -1.61
SUB1-202ENST00000502453 RTL5Q5HYW3 569 aaPredicted RBP4.98□□□□□ -1.61
SUB1-202ENST00000502453 ZFYVE27Q5T4F4 411 aa4.98□□□□□ -1.61
SUB1-202ENST00000502453 TMX4Q9H1E5 349 aaPredicted RBP4.98□□□□□ -1.61
SUB1-202ENST00000502453 HMX1Q9NP08 348 aaPredicted RBP4.98□□□□□ -1.61
SUB1-202ENST00000502453 NOP58Q9Y2X3 529 aaKnown RBP4.98□□□□□ -1.61
SUB1-202ENST00000502453 HMGB1P1B2RPK0 211 aaPredicted RBP4.98□□□□□ -1.61
SUB1-202ENST00000502453 SCAMP3O14828 347 aaKnown RBP4.98□□□□□ -1.61
SUB1-202ENST00000502453 U2SURPO15042 1029 aaKnown RBP4.98□□□□□ -1.61
SUB1-202ENST00000502453 FOXD4Q12950 439 aaPredicted RBP4.98□□□□□ -1.61
SUB1-202ENST00000502453 FBXO33Q7Z6M2 555 aa4.98□□□□□ -1.61
SUB1-202ENST00000502453 MICALL2Q8IY33 904 aa4.98□□□□□ -1.61
SUB1-202ENST00000502453 TMEM87AQ8NBN3 555 aa4.98□□□□□ -1.61
SUB1-202ENST00000502453 CCSER2Q9H7U1 834 aa4.98□□□□□ -1.61
SUB1-202ENST00000502453 CLSPNQ9HAW4 1339 aa4.98□□□□□ -1.61
SUB1-202ENST00000502453 DEPDC4Q8N2C3 294 aa4.98□□□□□ -1.61
SUB1-202ENST00000502453 NAP1L2Q9ULW6 460 aaPredicted RBP4.98□□□□□ -1.61
SUB1-202ENST00000502453 TBX22Q9Y458 520 aa4.98□□□□□ -1.61
SUB1-202ENST00000502453 MRPL42Q9Y6G3 142 aaKnown RBP4.98□□□□□ -1.61
SUB1-202ENST00000502453 RNF187Q5TA31 235 aaPredicted RBP4.97□□□□□ -1.61
SUB1-202ENST00000502453 FILIP1Q7Z7B0 1213 aa4.97□□□□□ -1.61
SUB1-202ENST00000502453 GJD4Q96KN9 370 aaPredicted RBP4.97□□□□□ -1.61
SUB1-202ENST00000502453 MAGEC2Q9UBF1 373 aaPredicted RBP4.97□□□□□ -1.61
SUB1-202ENST00000502453 COL4A3BPQ9Y5P4 624 aa4.97□□□□□ -1.61
SUB1-202ENST00000502453 CABLES1Q8TDN4 633 aa4.97□□□□□ -1.61
SUB1-202ENST00000502453 SLAIN2Q9P270 581 aa4.97□□□□□ -1.61
SUB1-202ENST00000502453 PCDHB15Q9Y5E8 787 aa4.97□□□□□ -1.61
SUB1-202ENST00000502453 HOXA2O43364 376 aa4.97□□□□□ -1.61
SUB1-202ENST00000502453 ATP2B4P23634 1241 aa4.97□□□□□ -1.61
SUB1-202ENST00000502453 DIXDC1Q155Q3 683 aa4.97□□□□□ -1.61
SUB1-202ENST00000502453 JAZF1Q86VZ6 243 aa4.97□□□□□ -1.61
SUB1-202ENST00000502453 SMC5Q8IY18 1101 aa4.97□□□□□ -1.61
SUB1-202ENST00000502453 CUEDC1Q9NWM3 386 aaPredicted RBP4.97□□□□□ -1.61
SUB1-202ENST00000502453 C2orf72A6NCS6 295 aa4.96□□□□□ -1.61
SUB1-202ENST00000502453 MCCP23508 829 aa4.96□□□□□ -1.61
SUB1-202ENST00000502453 MCCD1P59942 119 aaPredicted RBP4.96□□□□□ -1.61
SUB1-202ENST00000502453 EAPPQ56P03 285 aaPredicted RBP4.96□□□□□ -1.61
SUB1-202ENST00000502453 PRR12Q9ULL5 1215 aa4.96□□□□□ -1.61
SUB1-202ENST00000502453 COLQQ9Y215 455 aaPredicted RBP4.96□□□□□ -1.61
SUB1-202ENST00000502453 PPFIA4O75335 1185 aa4.96□□□□□ -1.62
SUB1-202ENST00000502453 S100BP04271 92 aaPredicted RBP4.96□□□□□ -1.62
SUB1-202ENST00000502453 RAD51AP2Q09MP3 1159 aa4.96□□□□□ -1.62
SUB1-202ENST00000502453 SLFNL1Q499Z3 407 aa4.96□□□□□ -1.62
SUB1-202ENST00000502453 GLYCTKQ8IVS8 523 aa4.96□□□□□ -1.62
SUB1-202ENST00000502453 ACBD3Q9H3P7 528 aa4.96□□□□□ -1.62
SUB1-202ENST00000502453 TMC2Q8TDI7 906 aa4.96□□□□□ -1.62
SUB1-202ENST00000502453 BIRC2Q13490 618 aa4.95□□□□□ -1.62
SUB1-202ENST00000502453 ENOX2Q16206 610 aaKnown RBP4.95□□□□□ -1.62
SUB1-202ENST00000502453 LONRF3Q496Y0 759 aa4.95□□□□□ -1.62
SUB1-202ENST00000502453 METTL3Q86U44 580 aaKnown RBP4.95□□□□□ -1.62
SUB1-202ENST00000502453 SPIRE2Q8WWL2 714 aa4.95□□□□□ -1.62
SUB1-202ENST00000502453 TRIM34Q9BYJ4 488 aa4.95□□□□□ -1.62
SUB1-202ENST00000502453 POTEFA5A3E0 1075 aa4.95□□□□□ -1.62
SUB1-202ENST00000502453 MOXD2PA6NHM9 499 aa4.95□□□□□ -1.62
SUB1-202ENST00000502453 ATP9BO43861 1147 aa4.95□□□□□ -1.62
SUB1-202ENST00000502453 WDHD1O75717 1129 aaPredicted RBP4.95□□□□□ -1.62
SUB1-202ENST00000502453 KIF4AO95239 1232 aa4.95□□□□□ -1.62
SUB1-202ENST00000502453 NDUFV2P19404 249 aa4.95□□□□□ -1.62
SUB1-202ENST00000502453 KANK4Q5T7N3 995 aaPredicted RBP4.95□□□□□ -1.62
SUB1-202ENST00000502453 ERICH6BQ5W0A0 696 aa4.95□□□□□ -1.62
SUB1-202ENST00000502453 PPP1R18Q6NYC8 613 aa4.95□□□□□ -1.62
SUB1-202ENST00000502453 PLPP6Q8IY26 295 aa4.95□□□□□ -1.62
SUB1-202ENST00000502453 TINF2Q9BSI4 451 aa4.95□□□□□ -1.62
SUB1-202ENST00000502453 FMNL3Q8IVF7 1028 aa4.95□□□□□ -1.62
SUB1-202ENST00000502453 ZCRB1Q8TBF4 217 aaKnown RBP4.95□□□□□ -1.62
SUB1-202ENST00000502453 RBM33Q96EV2 1170 aaKnown RBP4.95□□□□□ -1.62
SUB1-202ENST00000502453 L3MBTL3Q96JM7 780 aaPredicted RBP4.95□□□□□ -1.62
SUB1-202ENST00000502453 PIK3CDO00329 1044 aa4.94□□□□□ -1.62
SUB1-202ENST00000502453 MAP3K7O43318 606 aa4.94□□□□□ -1.62
SUB1-202ENST00000502453 IRX5P78411 483 aaPredicted RBP4.94□□□□□ -1.62
SUB1-202ENST00000502453 IPO4Q8TEX9 1081 aaKnown RBP4.94□□□□□ -1.62
SUB1-202ENST00000502453 IFT57Q9NWB7 429 aa4.94□□□□□ -1.62
SUB1-202ENST00000502453 UBA5Q9GZZ9 404 aa4.94□□□□□ -1.62
SUB1-202ENST00000502453 HAX1O00165 279 aa4.94□□□□□ -1.62
SUB1-202ENST00000502453 PDE6BP35913 854 aa4.94□□□□□ -1.62
SUB1-202ENST00000502453 CRTC2Q53ET0 693 aaPredicted RBP4.94□□□□□ -1.62
SUB1-202ENST00000502453 NUTM1Q86Y26 1132 aa4.94□□□□□ -1.62
SUB1-202ENST00000502453 TIE1P35590 1138 aa4.94□□□□□ -1.62
SUB1-202ENST00000502453 CCAR1Q8IX12 1150 aaKnown RBP4.94□□□□□ -1.62
SUB1-202ENST00000502453 JDP2Q8WYK2 163 aa4.94□□□□□ -1.62
SUB1-202ENST00000502453 MRS2Q9HD23 443 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms