RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 SPATA31A5Q5VU36 1347 aa10.42□□□□□ -0.74
SH3RF1-202ENST00000502315 SPATA31A7Q8IWB4 1347 aa10.42□□□□□ -0.74
SH3RF1-202ENST00000502315 PLEKHG3A1L390 1219 aa10.42□□□□□ -0.74
SH3RF1-202ENST00000502315 BAG6P46379 1132 aa10.42□□□□□ -0.74
SH3RF1-202ENST00000502315 SAFB2Q14151 953 aaKnown RBP eCLIP10.42□□□□□ -0.74
SH3RF1-202ENST00000502315 CABLES1Q8TDN4 633 aa10.42□□□□□ -0.74
SH3RF1-202ENST00000502315 BTG4Q9NY30 223 aa10.42□□□□□ -0.74
SH3RF1-202ENST00000502315 CCDC9Q9Y3X0 531 aaKnown RBP10.42□□□□□ -0.74
SH3RF1-202ENST00000502315 SRCAPQ6ZRS2 3230 aa10.42□□□□□ -0.74
SH3RF1-202ENST00000502315 ATP7BP35670 1465 aa10.42□□□□□ -0.74
SH3RF1-202ENST00000502315 COL14A1Q05707 1796 aaKnown RBP10.42□□□□□ -0.74
SH3RF1-202ENST00000502315 POLR3AO14802 1390 aaPredicted RBP10.41□□□□□ -0.74
SH3RF1-202ENST00000502315 ALS2Q96Q42 1657 aa10.41□□□□□ -0.74
SH3RF1-202ENST00000502315 NUDT16Q96DE0 195 aaKnown RBP10.41□□□□□ -0.74
SH3RF1-202ENST00000502315 KDM2AQ9Y2K7 1162 aa10.41□□□□□ -0.74
SH3RF1-202ENST00000502315 TRPM3Q9HCF6 1732 aaPredicted RBP10.41□□□□□ -0.74
SH3RF1-202ENST00000502315 DISP2A7MBM2 1401 aa10.41□□□□□ -0.74
SH3RF1-202ENST00000502315 MINK1Q8N4C8 1332 aaPredicted RBP10.4□□□□□ -0.74
SH3RF1-202ENST00000502315 PRR36Q9H6K5 1346 aa10.4□□□□□ -0.74
SH3RF1-202ENST00000502315 PLCH1Q4KWH8 1693 aa10.4□□□□□ -0.74
SH3RF1-202ENST00000502315 ABCA3Q99758 1704 aa10.39□□□□□ -0.75
SH3RF1-202ENST00000502315 FAM196AQ6ZSG2 479 aa10.39□□□□□ -0.75
SH3RF1-202ENST00000502315 BARGINQ6ZT62 677 aa10.39□□□□□ -0.75
SH3RF1-202ENST00000502315 PRDM11Q9NQV5 511 aa10.39□□□□□ -0.75
SH3RF1-202ENST00000502315 THRAP3Q9Y2W1 955 aaKnown RBP10.39□□□□□ -0.75
SH3RF1-202ENST00000502315 PARD3Q8TEW0 1356 aa10.39□□□□□ -0.75
SH3RF1-202ENST00000502315 ITSN1Q15811 1721 aa10.38□□□□□ -0.75
SH3RF1-202ENST00000502315 KIAA1210Q9ULL0 1709 aa10.38□□□□□ -0.75
SH3RF1-202ENST00000502315 FAM98CQ17RN3 349 aaKnown RBP10.38□□□□□ -0.75
SH3RF1-202ENST00000502315 NBPF8Q3BBV2 869 aa10.38□□□□□ -0.75
SH3RF1-202ENST00000502315 HIRIP3Q9BW71 556 aaPredicted RBP10.38□□□□□ -0.75
SH3RF1-202ENST00000502315 CDK19Q9BWU1 502 aa10.38□□□□□ -0.75
SH3RF1-202ENST00000502315 CPDO75976 1380 aa10.38□□□□□ -0.75
SH3RF1-202ENST00000502315 BRWD3Q6RI45 1802 aa10.37□□□□□ -0.75
SH3RF1-202ENST00000502315 SPATA31A1Q5TZJ5 1347 aa10.37□□□□□ -0.75
SH3RF1-202ENST00000502315 PAK3O75914 559 aaPredicted RBP10.37□□□□□ -0.75
SH3RF1-202ENST00000502315 NRAPQ86VF7 1730 aa10.37□□□□□ -0.75
SH3RF1-202ENST00000502315 NLRP13Q86W25 1043 aa10.37□□□□□ -0.75
SH3RF1-202ENST00000502315 DEFB132Q7Z7B7 95 aa10.36□□□□□ -0.75
SH3RF1-202ENST00000502315 ACEP12821 1306 aa10.35□□□□□ -0.75
SH3RF1-202ENST00000502315 A0A0G2JS52 829 aa10.35□□□□□ -0.75
SH3RF1-202ENST00000502315 EVA1CP58658 441 aa10.35□□□□□ -0.75
SH3RF1-202ENST00000502315 MYT1Q01538 1121 aa10.35□□□□□ -0.75
SH3RF1-202ENST00000502315 LRP5O75197 1615 aa10.35□□□□□ -0.75
SH3RF1-202ENST00000502315 USP19O94966 1318 aa10.34□□□□□ -0.75
SH3RF1-202ENST00000502315 ARHGEF28Q8N1W1 1705 aaKnown RBP10.34□□□□□ -0.75
SH3RF1-202ENST00000502315 CRYBG1Q9Y4K1 1723 aa10.34□□□□□ -0.75
SH3RF1-202ENST00000502315 ABTB2Q8N961 1025 aa10.34□□□□□ -0.75
SH3RF1-202ENST00000502315 ZNF692Q9BU19 519 aaPredicted RBP10.34□□□□□ -0.75
SH3RF1-202ENST00000502315 KIAA0232Q92628 1395 aa10.34□□□□□ -0.75
SH3RF1-202ENST00000502315 THSD7AQ9UPZ6 1657 aa10.34□□□□□ -0.75
SH3RF1-202ENST00000502315 RGPD1P0DJD0 1748 aa10.33□□□□□ -0.76
SH3RF1-202ENST00000502315 CENPJQ9HC77 1338 aaPredicted RBP10.33□□□□□ -0.76
SH3RF1-202ENST00000502315 GCP02774 474 aa10.32□□□□□ -0.76
SH3RF1-202ENST00000502315 PDE3BQ13370 1112 aa10.32□□□□□ -0.76
SH3RF1-202ENST00000502315 TCP11L2Q8N4U5 519 aa10.32□□□□□ -0.76
SH3RF1-202ENST00000502315 CAMKK2Q96RR4 588 aa10.31□□□□□ -0.76
SH3RF1-202ENST00000502315 CDCA7Q9BWT1 371 aaPredicted RBP10.31□□□□□ -0.76
SH3RF1-202ENST00000502315 SSH2Q76I76 1423 aa10.31□□□□□ -0.76
SH3RF1-202ENST00000502315 TOPAZ1Q8N9V7 1692 aa10.31□□□□□ -0.76
SH3RF1-202ENST00000502315 AATKQ6ZMQ8 1374 aa10.3□□□□□ -0.76
SH3RF1-202ENST00000502315 ZC3H6P61129 1189 aaKnown RBP10.3□□□□□ -0.76
SH3RF1-202ENST00000502315 SRPK2P78362 688 aaKnown RBP10.3□□□□□ -0.76
SH3RF1-202ENST00000502315 EN1Q05925 392 aaPredicted RBP10.3□□□□□ -0.76
SH3RF1-202ENST00000502315 NBPF14Q5TI25 921 aa10.3□□□□□ -0.76
SH3RF1-202ENST00000502315 EVC2Q86UK5 1308 aa10.3□□□□□ -0.76
SH3RF1-202ENST00000502315 PHRF1Q9P1Y6 1649 aaKnown RBP10.29□□□□□ -0.76
SH3RF1-202ENST00000502315 KCNH5Q8NCM2 988 aa10.29□□□□□ -0.76
SH3RF1-202ENST00000502315 BCL9O00512 1426 aa10.28□□□□□ -0.76
SH3RF1-202ENST00000502315 PPIP5K1Q6PFW1 1433 aa10.28□□□□□ -0.76
SH3RF1-202ENST00000502315 PLSCR1O15162 318 aa10.28□□□□□ -0.76
SH3RF1-202ENST00000502315 SLC24A1O60721 1099 aa10.28□□□□□ -0.76
SH3RF1-202ENST00000502315 PLEKHG5O94827 1062 aa10.28□□□□□ -0.76
SH3RF1-202ENST00000502315 APBA3O96018 575 aa10.28□□□□□ -0.76
SH3RF1-202ENST00000502315 CHRNA2Q15822 529 aa10.28□□□□□ -0.76
SH3RF1-202ENST00000502315 NBPF1Q3BBV0 1214 aa10.28□□□□□ -0.76
SH3RF1-202ENST00000502315 STRN4Q9NRL3 753 aa10.28□□□□□ -0.76
SH3RF1-202ENST00000502315 TTC21AQ8NDW8 1320 aa10.28□□□□□ -0.76
SH3RF1-202ENST00000502315 USP6P35125 1406 aa10.27□□□□□ -0.77
SH3RF1-202ENST00000502315 CRB1P82279 1406 aa10.27□□□□□ -0.77
SH3RF1-202ENST00000502315 PUS7Q96PZ0 661 aaKnown RBP10.27□□□□□ -0.77
SH3RF1-202ENST00000502315 LMO7Q8WWI1 1683 aa10.27□□□□□ -0.77
SH3RF1-202ENST00000502315 CAMTA1Q9Y6Y1 1673 aa10.27□□□□□ -0.77
SH3RF1-202ENST00000502315 TRIM37O94972 964 aa10.26□□□□□ -0.77
SH3RF1-202ENST00000502315 NLRP6P59044 892 aa10.26□□□□□ -0.77
SH3RF1-202ENST00000502315 EZH2Q15910 746 aaKnown RBP10.26□□□□□ -0.77
SH3RF1-202ENST00000502315 LARP1Q6PKG0 1096 aaKnown RBP10.26□□□□□ -0.77
SH3RF1-202ENST00000502315 CABP1Q9NZU7 370 aa10.26□□□□□ -0.77
SH3RF1-202ENST00000502315 NRKQ7Z2Y5 1582 aa10.26□□□□□ -0.77
SH3RF1-202ENST00000502315 COL5A2P05997 1499 aaPredicted RBP10.25□□□□□ -0.77
SH3RF1-202ENST00000502315 SLIT3O75094 1523 aa10.25□□□□□ -0.77
SH3RF1-202ENST00000502315 SBNO2Q9Y2G9 1366 aa10.25□□□□□ -0.77
SH3RF1-202ENST00000502315 TNS1Q9HBL0 1735 aaKnown RBP10.24□□□□□ -0.77
SH3RF1-202ENST00000502315 R3HDM1Q15032 1099 aaKnown RBP10.24□□□□□ -0.77
SH3RF1-202ENST00000502315 NUTM2GQ5VZR2 741 aa10.24□□□□□ -0.77
SH3RF1-202ENST00000502315 ARHGEF25Q86VW2 580 aa10.24□□□□□ -0.77
SH3RF1-202ENST00000502315 L3MBTL2Q969R5 705 aa10.24□□□□□ -0.77
SH3RF1-202ENST00000502315 CABP2Q9NPB3 220 aa10.24□□□□□ -0.77
SH3RF1-202ENST00000502315 OVOS2A0A0G2JMS6 1433 aa10.24□□□□□ -0.77
SH3RF1-202ENST00000502315 OVOS2A0A0J9YW53 1432 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms