RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 SSH2Q76I76 1423 aa21.68■■□□□ 1.06
CPNE1-228ENST00000498814 MYOM1P52179 1685 aa21.68■■□□□ 1.06
CPNE1-228ENST00000498814 LRP6O75581 1613 aa21.67■■□□□ 1.06
CPNE1-228ENST00000498814 KTN1Q86UP2 1357 aaKnown RBP21.67■■□□□ 1.06
CPNE1-228ENST00000498814 LMOD2Q6P5Q4 547 aa21.67■■□□□ 1.06
CPNE1-228ENST00000498814 HDGFL2Q7Z4V5 671 aaPredicted RBP21.67■■□□□ 1.06
CPNE1-228ENST00000498814 TERF2IPQ9NYB0 399 aa21.67■■□□□ 1.06
CPNE1-228ENST00000498814 NRKQ7Z2Y5 1582 aa21.66■■□□□ 1.06
CPNE1-228ENST00000498814 NUTM2BA6NNL0 878 aaPredicted RBP21.65■■□□□ 1.06
CPNE1-228ENST00000498814 NUTM2EB1AL46 878 aaPredicted RBP21.65■■□□□ 1.06
CPNE1-228ENST00000498814 NUTM2AQ8IVF1 878 aaPredicted RBP21.65■■□□□ 1.06
CPNE1-228ENST00000498814 ABCA3Q99758 1704 aa21.65■■□□□ 1.06
CPNE1-228ENST00000498814 A0A1W2PP64 1363 aa21.64■■□□□ 1.06
CPNE1-228ENST00000498814 MARF1Q9Y4F3 1742 aaKnown RBP21.63■■□□□ 1.05
CPNE1-228ENST00000498814 CRYBG1Q9Y4K1 1723 aa21.63■■□□□ 1.05
CPNE1-228ENST00000498814 C11orf95C9JLR9 678 aaPredicted RBP21.63■■□□□ 1.05
CPNE1-228ENST00000498814 ANKRD36BQ8N2N9 1353 aa21.62■■□□□ 1.05
CPNE1-228ENST00000498814 TTC21BQ7Z4L5 1316 aa21.62■■□□□ 1.05
CPNE1-228ENST00000498814 ABTB2Q8N961 1025 aa21.62■■□□□ 1.05
CPNE1-228ENST00000498814 TTC21AQ8NDW8 1320 aa21.61■■□□□ 1.05
CPNE1-228ENST00000498814 PIK3C2AO00443 1686 aa21.61■■□□□ 1.05
CPNE1-228ENST00000498814 EDC4Q6P2E9 1401 aaKnown RBP21.61■■□□□ 1.05
CPNE1-228ENST00000498814 CABLES1Q8TDN4 633 aa21.6■■□□□ 1.05
CPNE1-228ENST00000498814 POLR3GLQ9BT43 218 aa21.59■■□□□ 1.05
CPNE1-228ENST00000498814 MEX3CQ5U5Q3 659 aaKnown RBP21.58■■□□□ 1.05
CPNE1-228ENST00000498814 NLRP13Q86W25 1043 aa21.58■■□□□ 1.05
CPNE1-228ENST00000498814 PHRF1Q9P1Y6 1649 aaKnown RBP21.58■■□□□ 1.04
CPNE1-228ENST00000498814 KIF7Q2M1P5 1343 aa21.57■■□□□ 1.04
CPNE1-228ENST00000498814 ADAMTS2O95450 1211 aa21.57■■□□□ 1.04
CPNE1-228ENST00000498814 NUTM2GQ5VZR2 741 aa21.57■■□□□ 1.04
CPNE1-228ENST00000498814 HAP1P54257 671 aaPredicted RBP21.56■■□□□ 1.04
CPNE1-228ENST00000498814 USP54Q70EL1 1684 aa21.56■■□□□ 1.04
CPNE1-228ENST00000498814 USP19O94966 1318 aa21.55■■□□□ 1.04
CPNE1-228ENST00000498814 PLEKHG5O94827 1062 aa21.55■■□□□ 1.04
CPNE1-228ENST00000498814 NLRP6P59044 892 aa21.55■■□□□ 1.04
CPNE1-228ENST00000498814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.55■■□□□ 1.04
CPNE1-228ENST00000498814 USP31Q70CQ4 1352 aa21.53■■□□□ 1.04
CPNE1-228ENST00000498814 PHF23Q9BUL5 403 aaPredicted RBP21.53■■□□□ 1.04
CPNE1-228ENST00000498814 CCDC7Q96M83 1385 aa21.52■■□□□ 1.04
CPNE1-228ENST00000498814 SLIT3O75094 1523 aa21.52■■□□□ 1.04
CPNE1-228ENST00000498814 C8orf37Q96NL8 207 aa21.52■■□□□ 1.04
CPNE1-228ENST00000498814 CARD14Q9BXL6 1004 aa21.52■■□□□ 1.04
CPNE1-228ENST00000498814 NME9Q86XW9 330 aa21.51■■□□□ 1.03
CPNE1-228ENST00000498814 WASHC2AQ641Q2 1341 aa21.51■■□□□ 1.03
CPNE1-228ENST00000498814 NGLY1Q96IV0 654 aa21.5■■□□□ 1.03
CPNE1-228ENST00000498814 KIF20BQ96Q89 1820 aa21.5■■□□□ 1.03
CPNE1-228ENST00000498814 GCP02774 474 aa21.49■■□□□ 1.03
CPNE1-228ENST00000498814 RGS17Q9UGC6 210 aaPredicted RBP21.49■■□□□ 1.03
CPNE1-228ENST00000498814 FNBP4Q8N3X1 1017 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-228ENST00000498814 PANK3Q9H999 370 aa21.48■■□□□ 1.03
CPNE1-228ENST00000498814 ZRANB1Q9UGI0 708 aa21.48■■□□□ 1.03
CPNE1-228ENST00000498814 AFF2P51816 1311 aa21.48■■□□□ 1.03
CPNE1-228ENST00000498814 COL14A1Q05707 1796 aaKnown RBP21.48■■□□□ 1.03
CPNE1-228ENST00000498814 NSD3Q9BZ95 1437 aa21.47■■□□□ 1.03
CPNE1-228ENST00000498814 PLCH1Q4KWH8 1693 aa21.47■■□□□ 1.03
CPNE1-228ENST00000498814 OVOS2A0A0J9YW53 1432 aa21.46■■□□□ 1.03
CPNE1-228ENST00000498814 OVOS2Q6IE36 1432 aa21.46■■□□□ 1.03
CPNE1-228ENST00000498814 NWD2Q9ULI1 1742 aa21.46■■□□□ 1.03
CPNE1-228ENST00000498814 FAM83GA6ND36 823 aa21.46■■□□□ 1.03
CPNE1-228ENST00000498814 FYB1O15117 783 aa21.46■■□□□ 1.03
CPNE1-228ENST00000498814 KCNH5Q8NCM2 988 aa21.46■■□□□ 1.03
CPNE1-228ENST00000498814 CPDO75976 1380 aa21.46■■□□□ 1.03
CPNE1-228ENST00000498814 SLIT2O94813 1529 aa21.45■■□□□ 1.02
CPNE1-228ENST00000498814 ZC3H6P61129 1189 aaKnown RBP21.45■■□□□ 1.02
CPNE1-228ENST00000498814 ZNF772Q68DY9 489 aaPredicted RBP21.45■■□□□ 1.02
CPNE1-228ENST00000498814 KIAA0232Q92628 1395 aa21.45■■□□□ 1.02
CPNE1-228ENST00000498814 NFAT5O94916 1531 aa21.44■■□□□ 1.02
CPNE1-228ENST00000498814 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.43■■□□□ 1.02
CPNE1-228ENST00000498814 COG3Q96JB2 828 aa21.43■■□□□ 1.02
CPNE1-228ENST00000498814 PRDM11Q9NQV5 511 aa21.43■■□□□ 1.02
CPNE1-228ENST00000498814 CGNL1Q0VF96 1302 aa21.42■■□□□ 1.02
CPNE1-228ENST00000498814 BCL9LQ86UU0 1499 aa21.42■■□□□ 1.02
CPNE1-228ENST00000498814 USP21Q9UK80 565 aa21.42■■□□□ 1.02
CPNE1-228ENST00000498814 GGNBP2Q9H3C7 697 aa21.41■■□□□ 1.02
CPNE1-228ENST00000498814 NRAPQ86VF7 1730 aa21.4■■□□□ 1.02
CPNE1-228ENST00000498814 ANKRD26Q9UPS8 1709 aa21.4■■□□□ 1.02
CPNE1-228ENST00000498814 LMO7Q8WWI1 1683 aa21.4■■□□□ 1.02
CPNE1-228ENST00000498814 LTN1O94822 1766 aa21.39■■□□□ 1.01
CPNE1-228ENST00000498814 CHRNA2Q15822 529 aa21.39■■□□□ 1.01
CPNE1-228ENST00000498814 UNC5CLQ8IV45 518 aa21.39■■□□□ 1.01
CPNE1-228ENST00000498814 COL18A1P39060 1754 aa21.38■■□□□ 1.01
CPNE1-228ENST00000498814 SOX12O15370 315 aa21.38■■□□□ 1.01
CPNE1-228ENST00000498814 POTEAQ6S8J7 498 aa21.38■■□□□ 1.01
CPNE1-228ENST00000498814 ARHGEF25Q86VW2 580 aa21.38■■□□□ 1.01
CPNE1-228ENST00000498814 BTG4Q9NY30 223 aa21.38■■□□□ 1.01
CPNE1-228ENST00000498814 AATKQ6ZMQ8 1374 aa21.37■■□□□ 1.01
CPNE1-228ENST00000498814 KNSTRNQ9Y448 316 aa21.37■■□□□ 1.01
CPNE1-228ENST00000498814 PER1O15534 1290 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-228ENST00000498814 QTRT2Q9H974 415 aaKnown RBP21.36■■□□□ 1.01
CPNE1-228ENST00000498814 TRPC5Q9UL62 973 aaPredicted RBP21.36■■□□□ 1.01
CPNE1-228ENST00000498814 ATRNO75882 1429 aa21.36■■□□□ 1.01
CPNE1-228ENST00000498814 NSD2O96028 1365 aa21.36■■□□□ 1.01
CPNE1-228ENST00000498814 CAMTA1Q9Y6Y1 1673 aa21.35■■□□□ 1.01
CPNE1-228ENST00000498814 RGPD5Q99666 1765 aa21.35■■□□□ 1.01
CPNE1-228ENST00000498814 ABCC6O95255 1503 aa21.34■■□□□ 1.01
CPNE1-228ENST00000498814 ZBTB7CA1YPR0 619 aa21.33■■□□□ 1.01
CPNE1-228ENST00000498814 VPS72Q15906 364 aa21.32■■□□□ 1
CPNE1-228ENST00000498814 AMER1Q5JTC6 1135 aaPredicted RBP21.31■■□□□ 1
CPNE1-228ENST00000498814 MAP2P11137 1827 aaKnown RBP21.31■■□□□ 1
CPNE1-228ENST00000498814 RXRBP28702 533 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms