RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 COL16A1Q07092 1604 aaPredicted RBP15.52■□□□□ 0.08
CDK11A-222ENST00000498810 AHDC1Q5TGY3 1603 aaPredicted RBP15.52■□□□□ 0.08
CDK11A-222ENST00000498810 ASXL1Q8IXJ9 1541 aa15.52■□□□□ 0.07
CDK11A-222ENST00000498810 NHSL1Q5SYE7 1610 aa15.5■□□□□ 0.07
CDK11A-222ENST00000498810 RNF25Q96BH1 459 aaPredicted RBP15.5■□□□□ 0.07
CDK11A-222ENST00000498810 SCUBE2Q9NQ36 999 aa15.5■□□□□ 0.07
CDK11A-222ENST00000498810 MST1RQ04912 1400 aa15.5■□□□□ 0.07
CDK11A-222ENST00000498810 PRAG1Q86YV5 1406 aa15.5■□□□□ 0.07
CDK11A-222ENST00000498810 CDC42BPGQ6DT37 1551 aa15.49■□□□□ 0.07
CDK11A-222ENST00000498810 KDM2AQ9Y2K7 1162 aa15.49■□□□□ 0.07
CDK11A-222ENST00000498810 YTHDC2Q9H6S0 1430 aaKnown RBP15.49■□□□□ 0.07
CDK11A-222ENST00000498810 LRPPRCP42704 1394 aaKnown RBP15.49■□□□□ 0.07
CDK11A-222ENST00000498810 NRXN1Q9ULB1 1477 aa15.48■□□□□ 0.07
CDK11A-222ENST00000498810 TMEM132EQ6IEE7 984 aa15.48■□□□□ 0.07
CDK11A-222ENST00000498810 DCAF11Q8TEB1 546 aa15.48■□□□□ 0.07
CDK11A-222ENST00000498810 DHX57Q6P158 1386 aaKnown RBP15.48■□□□□ 0.07
CDK11A-222ENST00000498810 JCADQ9P266 1359 aa15.48■□□□□ 0.07
CDK11A-222ENST00000498810 SHPRHQ149N8 1683 aa15.48■□□□□ 0.07
CDK11A-222ENST00000498810 TECPR2O15040 1411 aa15.46■□□□□ 0.07
CDK11A-222ENST00000498810 GOLGA2Q08379 1002 aa15.46■□□□□ 0.07
CDK11A-222ENST00000498810 MKRN3Q13064 507 aaKnown RBP15.46■□□□□ 0.07
CDK11A-222ENST00000498810 BRINP3Q76B58 766 aa15.46■□□□□ 0.07
CDK11A-222ENST00000498810 RIOK3O14730 519 aaKnown RBP15.45■□□□□ 0.06
CDK11A-222ENST00000498810 CFAP70Q5T0N1 1121 aa15.45■□□□□ 0.06
CDK11A-222ENST00000498810 FMN2Q9NZ56 1722 aa15.45■□□□□ 0.06
CDK11A-222ENST00000498810 C1orf167Q5SNV9 1468 aa15.45■□□□□ 0.06
CDK11A-222ENST00000498810 PDCD7Q8N8D1 485 aaKnown RBP15.44■□□□□ 0.06
CDK11A-222ENST00000498810 MEX3CQ5U5Q3 659 aaKnown RBP15.43■□□□□ 0.06
CDK11A-222ENST00000498810 C14orf93Q9H972 538 aaKnown RBP15.43■□□□□ 0.06
CDK11A-222ENST00000498810 ABCC11Q96J66 1382 aa15.43■□□□□ 0.06
CDK11A-222ENST00000498810 KIF1AQ12756 1690 aa15.42■□□□□ 0.06
CDK11A-222ENST00000498810 WAPLQ7Z5K2 1190 aa15.42■□□□□ 0.06
CDK11A-222ENST00000498810 CABP2Q9NPB3 220 aa15.42■□□□□ 0.06
CDK11A-222ENST00000498810 POGKQ9P215 609 aa15.42■□□□□ 0.06
CDK11A-222ENST00000498810 KIAA1210Q9ULL0 1709 aa15.41■□□□□ 0.06
CDK11A-222ENST00000498810 SAFB2Q14151 953 aaKnown RBP eCLIP15.41■□□□□ 0.06
CDK11A-222ENST00000498810 STAC3Q96MF2 364 aa15.41■□□□□ 0.06
CDK11A-222ENST00000498810 DLC1Q96QB1 1528 aa15.41■□□□□ 0.06
CDK11A-222ENST00000498810 ARHGEF28Q8N1W1 1705 aaKnown RBP15.4■□□□□ 0.06
CDK11A-222ENST00000498810 PLEKHH1Q9ULM0 1364 aa15.4■□□□□ 0.06
CDK11A-222ENST00000498810 RGPD8O14715 1765 aaPredicted RBP15.4■□□□□ 0.06
CDK11A-222ENST00000498810 NUTM2FA1L443 756 aa15.4■□□□□ 0.06
CDK11A-222ENST00000498810 ILDR2Q71H61 639 aa15.4■□□□□ 0.06
CDK11A-222ENST00000498810 ADGRB1O14514 1584 aa15.39■□□□□ 0.05
CDK11A-222ENST00000498810 SPATA31A6Q5VVP1 1343 aa15.39■□□□□ 0.05
CDK11A-222ENST00000498810 TRIM26Q12899 539 aaPredicted RBP15.38■□□□□ 0.05
CDK11A-222ENST00000498810 ESCO1Q5FWF5 840 aa15.38■□□□□ 0.05
CDK11A-222ENST00000498810 PRAM1Q96QH2 718 aa15.38■□□□□ 0.05
CDK11A-222ENST00000498810 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.38■□□□□ 0.05
CDK11A-222ENST00000498810 TRAK1Q9UPV9 953 aa15.38■□□□□ 0.05
CDK11A-222ENST00000498810 NUTM2BA6NNL0 878 aaPredicted RBP15.37■□□□□ 0.05
CDK11A-222ENST00000498810 NUTM2EB1AL46 878 aaPredicted RBP15.37■□□□□ 0.05
CDK11A-222ENST00000498810 NUTM2AQ8IVF1 878 aaPredicted RBP15.37■□□□□ 0.05
CDK11A-222ENST00000498810 DDX17Q92841 729 aaKnown RBP15.37■□□□□ 0.05
CDK11A-222ENST00000498810 LRRC59Q96AG4 307 aaKnown RBP15.36■□□□□ 0.05
CDK11A-222ENST00000498810 ORAI2Q96SN7 254 aa15.36■□□□□ 0.05
CDK11A-222ENST00000498810 ADGRB2O60241 1585 aa15.36■□□□□ 0.05
CDK11A-222ENST00000498810 ITSN1Q15811 1721 aa15.35■□□□□ 0.05
CDK11A-222ENST00000498810 NEUROD1Q13562 356 aa15.35■□□□□ 0.05
CDK11A-222ENST00000498810 NPHP3Q7Z494 1330 aa15.35■□□□□ 0.05
CDK11A-222ENST00000498810 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.34■□□□□ 0.05
CDK11A-222ENST00000498810 ECM2O94769 699 aaPredicted RBP15.34■□□□□ 0.05
CDK11A-222ENST00000498810 ZFP91Q96JP5 570 aaPredicted RBP15.34■□□□□ 0.05
CDK11A-222ENST00000498810 LRP6O75581 1613 aa15.34■□□□□ 0.05
CDK11A-222ENST00000498810 EIF3AQ14152 1382 aaKnown RBP15.34■□□□□ 0.05
CDK11A-222ENST00000498810 SIRT1Q96EB6 747 aa15.33■□□□□ 0.04
CDK11A-222ENST00000498810 MINK1Q8N4C8 1332 aaPredicted RBP15.32■□□□□ 0.04
CDK11A-222ENST00000498810 PNPLA6Q8IY17 1366 aa15.32■□□□□ 0.04
CDK11A-222ENST00000498810 HIRIP3Q9BW71 556 aaPredicted RBP15.31■□□□□ 0.04
CDK11A-222ENST00000498810 QRICH2Q9H0J4 1663 aa15.31■□□□□ 0.04
CDK11A-222ENST00000498810 SOCS7O14512 581 aa15.3■□□□□ 0.04
CDK11A-222ENST00000498810 XPCQ01831 940 aaPredicted RBP15.3■□□□□ 0.04
CDK11A-222ENST00000498810 TRPM1Q7Z4N2 1603 aa15.3■□□□□ 0.04
CDK11A-222ENST00000498810 MARF1Q9Y4F3 1742 aaKnown RBP15.29■□□□□ 0.04
CDK11A-222ENST00000498810 USP32Q8NFA0 1604 aa15.29■□□□□ 0.04
CDK11A-222ENST00000498810 COL22A1Q8NFW1 1626 aaPredicted RBP15.29■□□□□ 0.04
CDK11A-222ENST00000498810 TULP4Q9NRJ4 1543 aa15.29■□□□□ 0.04
CDK11A-222ENST00000498810 FOXO3O43524 673 aa15.29■□□□□ 0.04
CDK11A-222ENST00000498810 EFCAB3Q8N7B9 438 aa15.29■□□□□ 0.04
CDK11A-222ENST00000498810 SIN3AQ96ST3 1273 aa15.29■□□□□ 0.04
CDK11A-222ENST00000498810 PXDNQ92626 1479 aa15.28■□□□□ 0.04
CDK11A-222ENST00000498810 ANKARQ7Z5J8 1434 aa15.28■□□□□ 0.04
CDK11A-222ENST00000498810 SOS2Q07890 1332 aaPredicted RBP15.28■□□□□ 0.04
CDK11A-222ENST00000498810 L3MBTL3Q96JM7 780 aaPredicted RBP15.28■□□□□ 0.04
CDK11A-222ENST00000498810 TONSLQ96HA7 1378 aa15.27■□□□□ 0.04
CDK11A-222ENST00000498810 ZNF772Q68DY9 489 aaPredicted RBP15.27■□□□□ 0.04
CDK11A-222ENST00000498810 PHF8Q9UPP1 1060 aa15.27■□□□□ 0.04
CDK11A-222ENST00000498810 HAP1P54257 671 aaPredicted RBP15.26■□□□□ 0.03
CDK11A-222ENST00000498810 DPY19L2Q6NUT2 758 aa15.26■□□□□ 0.03
CDK11A-222ENST00000498810 L3MBTL2Q969R5 705 aa15.26■□□□□ 0.03
CDK11A-222ENST00000498810 C8orf37Q96NL8 207 aa15.26■□□□□ 0.03
CDK11A-222ENST00000498810 ADAMTS2O95450 1211 aa15.25■□□□□ 0.03
CDK11A-222ENST00000498810 LMOD2Q6P5Q4 547 aa15.25■□□□□ 0.03
CDK11A-222ENST00000498810 SLAIN1Q8ND83 568 aa15.25■□□□□ 0.03
CDK11A-222ENST00000498810 TAOK2Q9UL54 1235 aa15.25■□□□□ 0.03
CDK11A-222ENST00000498810 ROCK2O75116 1388 aaKnown RBP15.24■□□□□ 0.03
CDK11A-222ENST00000498810 RGL2O15211 777 aa15.24■□□□□ 0.03
CDK11A-222ENST00000498810 PSME1Q06323 249 aa15.24■□□□□ 0.03
CDK11A-222ENST00000498810 RGS17Q9UGC6 210 aaPredicted RBP15.24■□□□□ 0.03
CDK11A-222ENST00000498810 AFF2P51816 1311 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms