RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-222ENST00000498801 TMEM134Q9H6X4 195 aa11.41□□□□□ -0.58
GARNL3-222ENST00000498801 CFDP1Q9UEE9 299 aaPredicted RBP11.41□□□□□ -0.58
GARNL3-222ENST00000498801 TRAPPC8Q9Y2L5 1435 aa11.41□□□□□ -0.58
GARNL3-222ENST00000498801 INO80Q9ULG1 1556 aaPredicted RBP11.41□□□□□ -0.58
GARNL3-222ENST00000498801 RAPGEF3O95398 923 aa11.4□□□□□ -0.58
GARNL3-222ENST00000498801 SKIV2LQ15477 1246 aaKnown RBP11.4□□□□□ -0.58
GARNL3-222ENST00000498801 ARHGAP33O14559 1287 aa11.39□□□□□ -0.59
GARNL3-222ENST00000498801 CD46P15529 392 aa11.39□□□□□ -0.59
GARNL3-222ENST00000498801 EMP3P54852 163 aa11.39□□□□□ -0.59
GARNL3-222ENST00000498801 MYSM1Q5VVJ2 828 aa11.39□□□□□ -0.59
GARNL3-222ENST00000498801 FGD6Q6ZV73 1430 aa11.39□□□□□ -0.59
GARNL3-222ENST00000498801 KIAA1468Q9P260 1216 aa11.39□□□□□ -0.59
GARNL3-222ENST00000498801 CCDC141Q6ZP82 1450 aa11.38□□□□□ -0.59
GARNL3-222ENST00000498801 RTEL1-TNFRSF6BF6WH68 1400 aa11.38□□□□□ -0.59
GARNL3-222ENST00000498801 YEATS2Q9ULM3 1422 aa11.38□□□□□ -0.59
GARNL3-222ENST00000498801 SULF1Q8IWU6 871 aa11.38□□□□□ -0.59
GARNL3-222ENST00000498801 SHANK2Q9UPX8 1470 aa11.38□□□□□ -0.59
GARNL3-222ENST00000498801 DIP2CQ9Y2E4 1556 aa11.37□□□□□ -0.59
GARNL3-222ENST00000498801 MARVELD3Q96A59 401 aa11.37□□□□□ -0.59
GARNL3-222ENST00000498801 TBC1D2Q9BYX2 928 aa11.37□□□□□ -0.59
GARNL3-222ENST00000498801 PLXNC1O60486 1568 aa11.37□□□□□ -0.59
GARNL3-222ENST00000498801 C9orf84Q5VXU9 1444 aa11.36□□□□□ -0.59
GARNL3-222ENST00000498801 AGLP35573 1532 aa11.36□□□□□ -0.59
GARNL3-222ENST00000498801 ATP7AQ04656 1500 aa11.36□□□□□ -0.59
GARNL3-222ENST00000498801 DDX11L8A8MPP1 907 aa11.36□□□□□ -0.59
GARNL3-222ENST00000498801 RSPH4AQ5TD94 716 aa11.36□□□□□ -0.59
GARNL3-222ENST00000498801 DMRTA1Q5VZB9 504 aa11.36□□□□□ -0.59
GARNL3-222ENST00000498801 AXIN2Q9Y2T1 843 aa11.36□□□□□ -0.59
GARNL3-222ENST00000498801 MAST1Q9Y2H9 1570 aa11.36□□□□□ -0.59
GARNL3-222ENST00000498801 PBX2P40425 430 aa11.35□□□□□ -0.59
GARNL3-222ENST00000498801 DIXDC1Q155Q3 683 aa11.35□□□□□ -0.59
GARNL3-222ENST00000498801 PPARGC1BQ86YN6 1023 aaKnown RBP11.35□□□□□ -0.59
GARNL3-222ENST00000498801 SLC4A5Q9BY07 1137 aa11.35□□□□□ -0.59
GARNL3-222ENST00000498801 POLR3EQ9NVU0 708 aa11.35□□□□□ -0.59
GARNL3-222ENST00000498801 RABGEF1Q9UJ41 708 aa11.35□□□□□ -0.59
GARNL3-222ENST00000498801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.35□□□□□ -0.59
GARNL3-222ENST00000498801 ATP10AO60312 1499 aa11.35□□□□□ -0.59
GARNL3-222ENST00000498801 ABCA6Q8N139 1617 aa11.35□□□□□ -0.59
GARNL3-222ENST00000498801 KIDINS220Q9ULH0 1771 aa11.34□□□□□ -0.59
GARNL3-222ENST00000498801 CLK2P49760 499 aaKnown RBP11.34□□□□□ -0.59
GARNL3-222ENST00000498801 AFAP1Q8N556 730 aa11.34□□□□□ -0.59
GARNL3-222ENST00000498801 PROCA1Q8NCQ7 364 aaPredicted RBP11.34□□□□□ -0.59
GARNL3-222ENST00000498801 PTPN23Q9H3S7 1636 aa11.34□□□□□ -0.59
GARNL3-222ENST00000498801 ZNF644Q9H582 1327 aaPredicted RBP11.34□□□□□ -0.59
GARNL3-222ENST00000498801 FAM205CA6NFA0 338 aa11.33□□□□□ -0.6
GARNL3-222ENST00000498801 ZNF687Q8N1G0 1237 aa11.33□□□□□ -0.6
GARNL3-222ENST00000498801 SPIRE2Q8WWL2 714 aa11.33□□□□□ -0.6
GARNL3-222ENST00000498801 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.32□□□□□ -0.6
GARNL3-222ENST00000498801 SEPT9Q9UHD8 586 aaPredicted RBP11.32□□□□□ -0.6
GARNL3-222ENST00000498801 DNMT1P26358 1616 aaKnown RBP11.31□□□□□ -0.6
GARNL3-222ENST00000498801 FLIIQ13045 1269 aa11.31□□□□□ -0.6
GARNL3-222ENST00000498801 RRBP1Q9P2E9 1410 aaKnown RBP11.31□□□□□ -0.6
GARNL3-222ENST00000498801 SPAG9O60271 1321 aaKnown RBP11.31□□□□□ -0.6
GARNL3-222ENST00000498801 SIGLEC1Q9BZZ2 1709 aa11.3□□□□□ -0.6
GARNL3-222ENST00000498801 ABCC5O15440 1437 aa11.3□□□□□ -0.6
GARNL3-222ENST00000498801 VPS9D1Q9Y2B5 631 aa11.3□□□□□ -0.6
GARNL3-222ENST00000498801 ADGRL2O95490 1459 aa11.3□□□□□ -0.6
GARNL3-222ENST00000498801 CROCC2H7BZ55 1655 aa11.3□□□□□ -0.6
GARNL3-222ENST00000498801 FAM135AQ9P2D6 1515 aa11.3□□□□□ -0.6
GARNL3-222ENST00000498801 DAPK1P53355 1430 aa11.29□□□□□ -0.6
GARNL3-222ENST00000498801 HNRNPMP52272 730 aaKnown RBP eCLIP11.29□□□□□ -0.6
GARNL3-222ENST00000498801 SWT1Q5T5J6 900 aaKnown RBP11.29□□□□□ -0.6
GARNL3-222ENST00000498801 NUTM1Q86Y26 1132 aa11.29□□□□□ -0.6
GARNL3-222ENST00000498801 RDH13Q8NBN7 331 aa11.29□□□□□ -0.6
GARNL3-222ENST00000498801 LIMD1Q9UGP4 676 aa11.29□□□□□ -0.6
GARNL3-222ENST00000498801 ZNF777Q9ULD5 760 aaPredicted RBP11.29□□□□□ -0.6
GARNL3-222ENST00000498801 ADAMTSL3P82987 1691 aa11.29□□□□□ -0.6
GARNL3-222ENST00000498801 BCORL1Q5H9F3 1711 aa11.29□□□□□ -0.6
GARNL3-222ENST00000498801 A2MP01023 1474 aa11.28□□□□□ -0.6
GARNL3-222ENST00000498801 FAM163AQ96GL9 167 aaPredicted RBP11.28□□□□□ -0.6
GARNL3-222ENST00000498801 HS3ST6Q96QI5 342 aa11.28□□□□□ -0.6
GARNL3-222ENST00000498801 ZMYND15Q9H091 742 aa11.28□□□□□ -0.6
GARNL3-222ENST00000498801 FAM98CQ17RN3 349 aaKnown RBP11.27□□□□□ -0.61
GARNL3-222ENST00000498801 ADGBQ8N7X0 1667 aa11.27□□□□□ -0.61
GARNL3-222ENST00000498801 POTEB3A0JP26 581 aa11.26□□□□□ -0.61
GARNL3-222ENST00000498801 POTEBQ6S5H4 581 aa11.26□□□□□ -0.61
GARNL3-222ENST00000498801 RIC3Q7Z5B4 369 aa11.26□□□□□ -0.61
GARNL3-222ENST00000498801 DHX29Q7Z478 1369 aaKnown RBP11.26□□□□□ -0.61
GARNL3-222ENST00000498801 MOXD2PA6NHM9 499 aa11.25□□□□□ -0.61
GARNL3-222ENST00000498801 SPTLC1O15269 473 aa11.25□□□□□ -0.61
GARNL3-222ENST00000498801 RSBN1LQ6PCB5 846 aaPredicted RBP11.25□□□□□ -0.61
GARNL3-222ENST00000498801 ERBINQ96RT1 1412 aa11.25□□□□□ -0.61
GARNL3-222ENST00000498801 EIF2AK4Q9P2K8 1649 aaKnown RBP11.24□□□□□ -0.61
GARNL3-222ENST00000498801 SLC10A3P09131 477 aa11.24□□□□□ -0.61
GARNL3-222ENST00000498801 MCM6Q14566 821 aa11.24□□□□□ -0.61
GARNL3-222ENST00000498801 NBPF3Q9H094 633 aa11.24□□□□□ -0.61
GARNL3-222ENST00000498801 ROCK1Q13464 1354 aa11.24□□□□□ -0.61
GARNL3-222ENST00000498801 DUOX2Q9NRD8 1548 aa11.24□□□□□ -0.61
GARNL3-222ENST00000498801 KDM4AO75164 1064 aa11.23□□□□□ -0.61
GARNL3-222ENST00000498801 GCGRP47871 477 aa11.23□□□□□ -0.61
GARNL3-222ENST00000498801 TUSC1Q2TAM9 212 aa11.23□□□□□ -0.61
GARNL3-222ENST00000498801 LCE2DQ5TA82 110 aaPredicted RBP11.23□□□□□ -0.61
GARNL3-222ENST00000498801 FBXO31Q5XUX0 539 aaPredicted RBP11.23□□□□□ -0.61
GARNL3-222ENST00000498801 LAPTM4BQ86VI4 370 aa11.23□□□□□ -0.61
GARNL3-222ENST00000498801 NCOA1Q15788 1441 aa11.23□□□□□ -0.61
GARNL3-222ENST00000498801 TK2O00142 265 aa11.22□□□□□ -0.61
GARNL3-222ENST00000498801 TSPY4P0CV99 314 aa11.22□□□□□ -0.61
GARNL3-222ENST00000498801 TSPY10P0CW01 314 aa11.22□□□□□ -0.61
GARNL3-222ENST00000498801 RNF17Q9BXT8 1623 aaKnown RBP11.22□□□□□ -0.61
GARNL3-222ENST00000498801 MADDQ8WXG6 1647 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms