RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 HIRIP3Q9BW71 556 aaPredicted RBP13.62□□□□□ -0.23
CCDC171-209ENST00000498725 HOXD11P31277 338 aaPredicted RBP13.61□□□□□ -0.23
CCDC171-209ENST00000498725 EZH2Q15910 746 aaKnown RBP13.61□□□□□ -0.23
CCDC171-209ENST00000498725 MPHOSPH9Q99550 1183 aa13.61□□□□□ -0.23
CCDC171-209ENST00000498725 ADGRB2O60241 1585 aa13.61□□□□□ -0.23
CCDC171-209ENST00000498725 CRYBG1Q9Y4K1 1723 aa13.61□□□□□ -0.23
CCDC171-209ENST00000498725 PAK3O75914 559 aaPredicted RBP13.6□□□□□ -0.23
CCDC171-209ENST00000498725 C14orf93Q9H972 538 aaKnown RBP13.6□□□□□ -0.23
CCDC171-209ENST00000498725 THSD7AQ9UPZ6 1657 aa13.59□□□□□ -0.23
CCDC171-209ENST00000498725 MINK1Q8N4C8 1332 aaPredicted RBP13.59□□□□□ -0.23
CCDC171-209ENST00000498725 GPRASP1Q5JY77 1395 aa13.58□□□□□ -0.23
CCDC171-209ENST00000498725 TRIM37O94972 964 aa13.58□□□□□ -0.24
CCDC171-209ENST00000498725 SIRT1Q96EB6 747 aa13.58□□□□□ -0.24
CCDC171-209ENST00000498725 SPATA31A5Q5VU36 1347 aa13.58□□□□□ -0.24
CCDC171-209ENST00000498725 SPATA31A7Q8IWB4 1347 aa13.58□□□□□ -0.24
CCDC171-209ENST00000498725 PRDM11Q9NQV5 511 aa13.57□□□□□ -0.24
CCDC171-209ENST00000498725 STRN4Q9NRL3 753 aa13.57□□□□□ -0.24
CCDC171-209ENST00000498725 TRAK1Q9UPV9 953 aa13.57□□□□□ -0.24
CCDC171-209ENST00000498725 ANKARQ7Z5J8 1434 aa13.56□□□□□ -0.24
CCDC171-209ENST00000498725 CHRNA2Q15822 529 aa13.56□□□□□ -0.24
CCDC171-209ENST00000498725 NGDNQ8NEJ9 315 aaKnown RBP13.56□□□□□ -0.24
CCDC171-209ENST00000498725 USP35Q9P2H5 1018 aa13.56□□□□□ -0.24
CCDC171-209ENST00000498725 PHRF1Q9P1Y6 1649 aaKnown RBP13.56□□□□□ -0.24
CCDC171-209ENST00000498725 APBA3O96018 575 aa13.55□□□□□ -0.24
CCDC171-209ENST00000498725 PRR36Q9H6K5 1346 aa13.55□□□□□ -0.24
CCDC171-209ENST00000498725 ACIN1Q9UKV3 1341 aaKnown RBP13.55□□□□□ -0.24
CCDC171-209ENST00000498725 NUP188Q5SRE5 1749 aa13.55□□□□□ -0.24
CCDC171-209ENST00000498725 RREB1Q92766 1687 aa13.54□□□□□ -0.24
CCDC171-209ENST00000498725 ITSN1Q15811 1721 aa13.54□□□□□ -0.24
CCDC171-209ENST00000498725 YY1P25490 414 aa13.54□□□□□ -0.24
CCDC171-209ENST00000498725 NUTM2GQ5VZR2 741 aa13.54□□□□□ -0.24
CCDC171-209ENST00000498725 DLC1Q96QB1 1528 aa13.54□□□□□ -0.24
CCDC171-209ENST00000498725 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
CCDC171-209ENST00000498725 CAMKK2Q96RR4 588 aa13.53□□□□□ -0.24
CCDC171-209ENST00000498725 DISP2A7MBM2 1401 aa13.53□□□□□ -0.24
CCDC171-209ENST00000498725 TULP4Q9NRJ4 1543 aa13.53□□□□□ -0.24
CCDC171-209ENST00000498725 FAM196AQ6ZSG2 479 aa13.52□□□□□ -0.25
CCDC171-209ENST00000498725 CNKSR2Q8WXI2 1034 aa13.52□□□□□ -0.25
CCDC171-209ENST00000498725 KDM2AQ9Y2K7 1162 aa13.52□□□□□ -0.25
CCDC171-209ENST00000498725 SPATA31A1Q5TZJ5 1347 aa13.52□□□□□ -0.25
CCDC171-209ENST00000498725 KIAA0232Q92628 1395 aa13.52□□□□□ -0.25
CCDC171-209ENST00000498725 WASLO00401 505 aaPredicted RBP13.5□□□□□ -0.25
CCDC171-209ENST00000498725 EVA1CP58658 441 aa13.5□□□□□ -0.25
CCDC171-209ENST00000498725 PDE3BQ13370 1112 aa13.5□□□□□ -0.25
CCDC171-209ENST00000498725 PPP1R1BQ9UD71 204 aaPredicted RBP13.5□□□□□ -0.25
CCDC171-209ENST00000498725 ADGRB1O14514 1584 aa13.49□□□□□ -0.25
CCDC171-209ENST00000498725 EIF3AQ14152 1382 aaKnown RBP13.49□□□□□ -0.25
CCDC171-209ENST00000498725 ARHGEF28Q8N1W1 1705 aaKnown RBP13.49□□□□□ -0.25
CCDC171-209ENST00000498725 CAMTA1Q9Y6Y1 1673 aa13.49□□□□□ -0.25
CCDC171-209ENST00000498725 NBPF8Q3BBV2 869 aa13.47□□□□□ -0.25
CCDC171-209ENST00000498725 NBPF14Q5TI25 921 aa13.47□□□□□ -0.25
CCDC171-209ENST00000498725 ZBTB7CA1YPR0 619 aa13.46□□□□□ -0.25
CCDC171-209ENST00000498725 NUDT16Q96DE0 195 aaKnown RBP13.46□□□□□ -0.25
CCDC171-209ENST00000498725 RNF39Q9H2S5 420 aa13.46□□□□□ -0.25
CCDC171-209ENST00000498725 SSH2Q76I76 1423 aa13.46□□□□□ -0.26
CCDC171-209ENST00000498725 LARP1Q6PKG0 1096 aaKnown RBP13.45□□□□□ -0.26
CCDC171-209ENST00000498725 DCAF11Q8TEB1 546 aa13.45□□□□□ -0.26
CCDC171-209ENST00000498725 RNF216Q9NWF9 866 aaPredicted RBP13.45□□□□□ -0.26
CCDC171-209ENST00000498725 NRKQ7Z2Y5 1582 aa13.45□□□□□ -0.26
CCDC171-209ENST00000498725 PARD3Q8TEW0 1356 aa13.45□□□□□ -0.26
CCDC171-209ENST00000498725 ATP7BP35670 1465 aa13.44□□□□□ -0.26
CCDC171-209ENST00000498725 SPON1Q9HCB6 807 aa13.44□□□□□ -0.26
CCDC171-209ENST00000498725 TOPAZ1Q8N9V7 1692 aa13.44□□□□□ -0.26
CCDC171-209ENST00000498725 SBF2Q86WG5 1849 aa13.43□□□□□ -0.26
CCDC171-209ENST00000498725 KCNQ2O43526 872 aa13.43□□□□□ -0.26
CCDC171-209ENST00000498725 LMO7Q8WWI1 1683 aa13.43□□□□□ -0.26
CCDC171-209ENST00000498725 PARP4Q9UKK3 1724 aaKnown RBP13.42□□□□□ -0.26
CCDC171-209ENST00000498725 BARGINQ6ZT62 677 aa13.42□□□□□ -0.26
CCDC171-209ENST00000498725 TCP11L2Q8N4U5 519 aa13.42□□□□□ -0.26
CCDC171-209ENST00000498725 CDK19Q9BWU1 502 aa13.42□□□□□ -0.26
CCDC171-209ENST00000498725 ACEP12821 1306 aa13.41□□□□□ -0.26
CCDC171-209ENST00000498725 ABTB2Q8N961 1025 aa13.41□□□□□ -0.26
CCDC171-209ENST00000498725 AKAP12Q02952 1782 aa13.38□□□□□ -0.27
CCDC171-209ENST00000498725 CASZ1Q86V15 1759 aa13.38□□□□□ -0.27
CCDC171-209ENST00000498725 MYOM1P52179 1685 aa13.38□□□□□ -0.27
CCDC171-209ENST00000498725 PEAK1Q9H792 1746 aa13.38□□□□□ -0.27
CCDC171-209ENST00000498725 LRRC37A3O60309 1634 aa13.38□□□□□ -0.27
CCDC171-209ENST00000498725 WNK3Q9BYP7 1800 aa13.37□□□□□ -0.27
CCDC171-209ENST00000498725 NINLQ9Y2I6 1382 aa13.37□□□□□ -0.27
CCDC171-209ENST00000498725 PDGFDQ9GZP0 370 aaPredicted RBP13.37□□□□□ -0.27
CCDC171-209ENST00000498725 RGPD3A6NKT7 1758 aaPredicted RBP13.37□□□□□ -0.27
CCDC171-209ENST00000498725 RGPD4Q7Z3J3 1758 aa13.37□□□□□ -0.27
CCDC171-209ENST00000498725 RGPD5Q99666 1765 aa13.37□□□□□ -0.27
CCDC171-209ENST00000498725 COL5A2P05997 1499 aaPredicted RBP13.36□□□□□ -0.27
CCDC171-209ENST00000498725 POLR3AO14802 1390 aaPredicted RBP13.36□□□□□ -0.27
CCDC171-209ENST00000498725 RAB3GAP2Q9H2M9 1393 aa13.36□□□□□ -0.27
CCDC171-209ENST00000498725 ZBTB7AO95365 584 aa13.36□□□□□ -0.27
CCDC171-209ENST00000498725 PTF1AQ7RTS3 328 aa13.36□□□□□ -0.27
CCDC171-209ENST00000498725 ANO8Q9HCE9 1232 aaPredicted RBP13.36□□□□□ -0.27
CCDC171-209ENST00000498725 OVOS2A0A0G2JMS6 1433 aa13.36□□□□□ -0.27
CCDC171-209ENST00000498725 OVOS2A0A0J9YW53 1432 aa13.36□□□□□ -0.27
CCDC171-209ENST00000498725 OVOS2Q6IE36 1432 aa13.36□□□□□ -0.27
CCDC171-209ENST00000498725 GCP02774 474 aa13.35□□□□□ -0.27
CCDC171-209ENST00000498725 NLRP13Q86W25 1043 aa13.35□□□□□ -0.27
CCDC171-209ENST00000498725 BCL11BQ9C0K0 894 aaPredicted RBP13.35□□□□□ -0.27
CCDC171-209ENST00000498725 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
CCDC171-209ENST00000498725 THRAP3Q9Y2W1 955 aaKnown RBP13.35□□□□□ -0.27
CCDC171-209ENST00000498725 CPDO75976 1380 aa13.34□□□□□ -0.27
CCDC171-209ENST00000498725 CRB1P82279 1406 aa13.34□□□□□ -0.27
CCDC171-209ENST00000498725 SRPK2P78362 688 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms