RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 SLC24A1O60721 1099 aa22.54■■□□□ 1.2
LMNA-217ENST00000498722 TMC1Q8TDI8 760 aa22.53■■□□□ 1.2
LMNA-217ENST00000498722 TMF1P82094 1093 aa22.52■■□□□ 1.2
LMNA-217ENST00000498722 C8orf37Q96NL8 207 aa22.51■■□□□ 1.19
LMNA-217ENST00000498722 MON2Q7Z3U7 1717 aa22.5■■□□□ 1.19
LMNA-217ENST00000498722 EIF4G2P78344 907 aaKnown RBP eCLIP22.5■■□□□ 1.19
LMNA-217ENST00000498722 CABLES1Q8TDN4 633 aa22.5■■□□□ 1.19
LMNA-217ENST00000498722 CRYBG1Q9Y4K1 1723 aa22.49■■□□□ 1.19
LMNA-217ENST00000498722 DIEXFQ68CQ4 756 aaKnown RBP22.49■■□□□ 1.19
LMNA-217ENST00000498722 USP6P35125 1406 aa22.48■■□□□ 1.19
LMNA-217ENST00000498722 PHRF1Q9P1Y6 1649 aaKnown RBP22.47■■□□□ 1.19
LMNA-217ENST00000498722 NUTM2GQ5VZR2 741 aa22.47■■□□□ 1.19
LMNA-217ENST00000498722 NGLY1Q96IV0 654 aa22.47■■□□□ 1.19
LMNA-217ENST00000498722 HSPA5P11021 654 aaKnown RBP22.46■■□□□ 1.19
LMNA-217ENST00000498722 ABTB2Q8N961 1025 aa22.46■■□□□ 1.19
LMNA-217ENST00000498722 NRKQ7Z2Y5 1582 aa22.45■■□□□ 1.18
LMNA-217ENST00000498722 KTN1Q86UP2 1357 aaKnown RBP22.45■■□□□ 1.18
LMNA-217ENST00000498722 AFF2P51816 1311 aa22.45■■□□□ 1.18
LMNA-217ENST00000498722 CDCA8Q53HL2 280 aa22.44■■□□□ 1.18
LMNA-217ENST00000498722 PUS7Q96PZ0 661 aaKnown RBP22.44■■□□□ 1.18
LMNA-217ENST00000498722 ZNF692Q9BU19 519 aaPredicted RBP22.44■■□□□ 1.18
LMNA-217ENST00000498722 SLC12A5Q9H2X9 1139 aa22.44■■□□□ 1.18
LMNA-217ENST00000498722 RGS17Q9UGC6 210 aaPredicted RBP22.44■■□□□ 1.18
LMNA-217ENST00000498722 HDGFL2Q7Z4V5 671 aaPredicted RBP22.43■■□□□ 1.18
LMNA-217ENST00000498722 PIK3C2AO00443 1686 aa22.43■■□□□ 1.18
LMNA-217ENST00000498722 PLCH1Q4KWH8 1693 aa22.43■■□□□ 1.18
LMNA-217ENST00000498722 BRD4O60885 1362 aaPredicted RBP22.42■■□□□ 1.18
LMNA-217ENST00000498722 POLR3GLQ9BT43 218 aa22.42■■□□□ 1.18
LMNA-217ENST00000498722 CPSF1Q10570 1443 aaKnown RBP22.42■■□□□ 1.18
LMNA-217ENST00000498722 ZNF772Q68DY9 489 aaPredicted RBP22.41■■□□□ 1.18
LMNA-217ENST00000498722 TERF2IPQ9NYB0 399 aa22.41■■□□□ 1.18
LMNA-217ENST00000498722 MYOM1P52179 1685 aa22.41■■□□□ 1.18
LMNA-217ENST00000498722 NINLQ9Y2I6 1382 aa22.41■■□□□ 1.18
LMNA-217ENST00000498722 CD163L1Q9NR16 1453 aa22.4■■□□□ 1.18
LMNA-217ENST00000498722 NLRP13Q86W25 1043 aa22.38■■□□□ 1.17
LMNA-217ENST00000498722 A0A1W2PP64 1363 aa22.38■■□□□ 1.17
LMNA-217ENST00000498722 POTEAQ6S8J7 498 aa22.37■■□□□ 1.17
LMNA-217ENST00000498722 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.37■■□□□ 1.17
LMNA-217ENST00000498722 TTC21BQ7Z4L5 1316 aa22.37■■□□□ 1.17
LMNA-217ENST00000498722 NWD2Q9ULI1 1742 aa22.37■■□□□ 1.17
LMNA-217ENST00000498722 COL14A1Q05707 1796 aaKnown RBP22.37■■□□□ 1.17
LMNA-217ENST00000498722 NLRP6P59044 892 aa22.36■■□□□ 1.17
LMNA-217ENST00000498722 USP21Q9UK80 565 aa22.36■■□□□ 1.17
LMNA-217ENST00000498722 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.36■■□□□ 1.17
LMNA-217ENST00000498722 SSH2Q76I76 1423 aa22.36■■□□□ 1.17
LMNA-217ENST00000498722 TTC21AQ8NDW8 1320 aa22.35■■□□□ 1.17
LMNA-217ENST00000498722 EDC4Q6P2E9 1401 aaKnown RBP22.34■■□□□ 1.17
LMNA-217ENST00000498722 KIF20BQ96Q89 1820 aa22.33■■□□□ 1.16
LMNA-217ENST00000498722 PRDM11Q9NQV5 511 aa22.32■■□□□ 1.16
LMNA-217ENST00000498722 ANKRD36BQ8N2N9 1353 aa22.32■■□□□ 1.16
LMNA-217ENST00000498722 ZC3H6P61129 1189 aaKnown RBP22.31■■□□□ 1.16
LMNA-217ENST00000498722 FNBP4Q8N3X1 1017 aaPredicted RBP22.31■■□□□ 1.16
LMNA-217ENST00000498722 QTRT2Q9H974 415 aaKnown RBP22.31■■□□□ 1.16
LMNA-217ENST00000498722 USP19O94966 1318 aa22.31■■□□□ 1.16
LMNA-217ENST00000498722 KIAA0232Q92628 1395 aa22.3■■□□□ 1.16
LMNA-217ENST00000498722 USP54Q70EL1 1684 aa22.3■■□□□ 1.16
LMNA-217ENST00000498722 ZBTB7CA1YPR0 619 aa22.3■■□□□ 1.16
LMNA-217ENST00000498722 FAM83GA6ND36 823 aa22.3■■□□□ 1.16
LMNA-217ENST00000498722 SOX12O15370 315 aa22.3■■□□□ 1.16
LMNA-217ENST00000498722 NME9Q86XW9 330 aa22.3■■□□□ 1.16
LMNA-217ENST00000498722 SLIT3O75094 1523 aa22.29■■□□□ 1.16
LMNA-217ENST00000498722 SLIT2O94813 1529 aa22.29■■□□□ 1.16
LMNA-217ENST00000498722 NRAPQ86VF7 1730 aa22.29■■□□□ 1.16
LMNA-217ENST00000498722 BCL9LQ86UU0 1499 aa22.28■■□□□ 1.16
LMNA-217ENST00000498722 LTN1O94822 1766 aa22.28■■□□□ 1.16
LMNA-217ENST00000498722 GCP02774 474 aa22.28■■□□□ 1.16
LMNA-217ENST00000498722 RXRBP28702 533 aa22.28■■□□□ 1.16
LMNA-217ENST00000498722 CHRNA2Q15822 529 aa22.28■■□□□ 1.16
LMNA-217ENST00000498722 TRPC5Q9UL62 973 aaPredicted RBP22.28■■□□□ 1.16
LMNA-217ENST00000498722 UNC5CLQ8IV45 518 aa22.27■■□□□ 1.16
LMNA-217ENST00000498722 ZRANB1Q9UGI0 708 aa22.27■■□□□ 1.16
LMNA-217ENST00000498722 RGPD5Q99666 1765 aa22.26■■□□□ 1.15
LMNA-217ENST00000498722 BTG4Q9NY30 223 aa22.26■■□□□ 1.15
LMNA-217ENST00000498722 CCDC9Q9Y3X0 531 aaKnown RBP22.25■■□□□ 1.15
LMNA-217ENST00000498722 ATRNO75882 1429 aa22.24■■□□□ 1.15
LMNA-217ENST00000498722 C11orf95C9JLR9 678 aaPredicted RBP22.23■■□□□ 1.15
LMNA-217ENST00000498722 RBM6P78332 1123 aaKnown RBP22.23■■□□□ 1.15
LMNA-217ENST00000498722 KCNH5Q8NCM2 988 aa22.23■■□□□ 1.15
LMNA-217ENST00000498722 CPDO75976 1380 aa22.22■■□□□ 1.15
LMNA-217ENST00000498722 USP31Q70CQ4 1352 aa22.22■■□□□ 1.15
LMNA-217ENST00000498722 NSD3Q9BZ95 1437 aa22.21■■□□□ 1.15
LMNA-217ENST00000498722 LMO7Q8WWI1 1683 aa22.21■■□□□ 1.15
LMNA-217ENST00000498722 STRN4Q9NRL3 753 aa22.2■■□□□ 1.14
LMNA-217ENST00000498722 NFAT5O94916 1531 aa22.2■■□□□ 1.14
LMNA-217ENST00000498722 KIF7Q2M1P5 1343 aa22.2■■□□□ 1.14
LMNA-217ENST00000498722 COG3Q96JB2 828 aa22.19■■□□□ 1.14
LMNA-217ENST00000498722 OVOS2A0A0J9YW53 1432 aa22.19■■□□□ 1.14
LMNA-217ENST00000498722 OVOS2Q6IE36 1432 aa22.19■■□□□ 1.14
LMNA-217ENST00000498722 GLI3P10071 1580 aa22.19■■□□□ 1.14
LMNA-217ENST00000498722 COL18A1P39060 1754 aa22.18■■□□□ 1.14
LMNA-217ENST00000498722 EVA1CP58658 441 aa22.18■■□□□ 1.14
LMNA-217ENST00000498722 GJD4Q96KN9 370 aaPredicted RBP22.18■■□□□ 1.14
LMNA-217ENST00000498722 CAMTA1Q9Y6Y1 1673 aa22.18■■□□□ 1.14
LMNA-217ENST00000498722 CARD14Q9BXL6 1004 aa22.17■■□□□ 1.14
LMNA-217ENST00000498722 GGNBP2Q9H3C7 697 aa22.17■■□□□ 1.14
LMNA-217ENST00000498722 ANKRD26Q9UPS8 1709 aa22.16■■□□□ 1.14
LMNA-217ENST00000498722 VPS72Q15906 364 aa22.16■■□□□ 1.14
LMNA-217ENST00000498722 CDK12Q9NYV4 1490 aaPredicted RBP22.16■■□□□ 1.14
LMNA-217ENST00000498722 PANK3Q9H999 370 aa22.15■■□□□ 1.14
LMNA-217ENST00000498722 BRWD3Q6RI45 1802 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms