RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 CCDC9Q9Y3X0 531 aaKnown RBP37.6■■■■□ 3.61
CUL4A-211ENST00000498562 ONECUT3O60422 494 aaPredicted RBP37.58■■■■□ 3.61
CUL4A-211ENST00000498562 PAK3O75914 559 aaPredicted RBP37.57■■■■□ 3.6
CUL4A-211ENST00000498562 NBPF1Q3BBV0 1214 aa37.57■■■■□ 3.6
CUL4A-211ENST00000498562 CDK19Q9BWU1 502 aa37.57■■■■□ 3.6
CUL4A-211ENST00000498562 PHRF1Q9P1Y6 1649 aaKnown RBP37.56■■■■□ 3.6
CUL4A-211ENST00000498562 BLMP54132 1417 aaPredicted RBP37.55■■■■□ 3.6
CUL4A-211ENST00000498562 BTG4Q9NY30 223 aa37.55■■■■□ 3.6
CUL4A-211ENST00000498562 POLR3AO14802 1390 aaPredicted RBP37.54■■■■□ 3.6
CUL4A-211ENST00000498562 CCDC61Q9Y6R9 512 aa37.48■■■■□ 3.59
CUL4A-211ENST00000498562 ACEP12821 1306 aa37.47■■■■□ 3.59
CUL4A-211ENST00000498562 KRT27Q7Z3Y8 459 aa37.46■■■■□ 3.59
CUL4A-211ENST00000498562 QRICH2Q9H0J4 1663 aa37.46■■■■□ 3.59
CUL4A-211ENST00000498562 ZRANB1Q9UGI0 708 aa37.45■■■■□ 3.59
CUL4A-211ENST00000498562 PLEKHG3A1L390 1219 aa37.44■■■■□ 3.58
CUL4A-211ENST00000498562 FAM98CQ17RN3 349 aaKnown RBP37.44■■■■□ 3.58
CUL4A-211ENST00000498562 PRDM11Q9NQV5 511 aa37.44■■■■□ 3.58
CUL4A-211ENST00000498562 SRCAPQ6ZRS2 3230 aa37.44■■■■□ 3.58
CUL4A-211ENST00000498562 CENPJQ9HC77 1338 aaPredicted RBP37.43■■■■□ 3.58
CUL4A-211ENST00000498562 KIAA0232Q92628 1395 aa37.42■■■■□ 3.58
CUL4A-211ENST00000498562 NBPF8Q3BBV2 869 aa37.42■■■■□ 3.58
CUL4A-211ENST00000498562 SPATA31A5Q5VU36 1347 aa37.41■■■■□ 3.58
CUL4A-211ENST00000498562 SPATA31A7Q8IWB4 1347 aa37.41■■■■□ 3.58
CUL4A-211ENST00000498562 THSD7AQ9UPZ6 1657 aa37.41■■■■□ 3.58
CUL4A-211ENST00000498562 A0A0G2JS52 829 aa37.41■■■■□ 3.58
CUL4A-211ENST00000498562 MYT1Q01538 1121 aa37.41■■■■□ 3.58
CUL4A-211ENST00000498562 NRKQ7Z2Y5 1582 aa37.4■■■■□ 3.58
CUL4A-211ENST00000498562 TRPM1Q7Z4N2 1603 aa37.39■■■■□ 3.58
CUL4A-211ENST00000498562 NUTM2GQ5VZR2 741 aa37.38■■■■□ 3.57
CUL4A-211ENST00000498562 L3MBTL2Q969R5 705 aa37.38■■■■□ 3.57
CUL4A-211ENST00000498562 PPIP5K1Q6PFW1 1433 aa37.37■■■■□ 3.57
CUL4A-211ENST00000498562 DEFB132Q7Z7B7 95 aa37.37■■■■□ 3.57
CUL4A-211ENST00000498562 SRPK2P78362 688 aaKnown RBP37.35■■■■□ 3.57
CUL4A-211ENST00000498562 SF3B2Q13435 895 aaKnown RBP37.35■■■■□ 3.57
CUL4A-211ENST00000498562 CHRNA2Q15822 529 aa37.35■■■■□ 3.57
CUL4A-211ENST00000498562 ZC3H6P61129 1189 aaKnown RBP37.32■■■■□ 3.56
CUL4A-211ENST00000498562 SIN3AQ96ST3 1273 aa37.32■■■■□ 3.56
CUL4A-211ENST00000498562 CABP2Q9NPB3 220 aa37.32■■■■□ 3.56
CUL4A-211ENST00000498562 USP19O94966 1318 aa37.3■■■■□ 3.56
CUL4A-211ENST00000498562 LMO7Q8WWI1 1683 aa37.29■■■■□ 3.56
CUL4A-211ENST00000498562 ABTB2Q8N961 1025 aa37.29■■■■□ 3.56
CUL4A-211ENST00000498562 SPATA31A1Q5TZJ5 1347 aa37.29■■■■□ 3.56
CUL4A-211ENST00000498562 RGPD1P0DJD0 1748 aa37.27■■■■□ 3.56
CUL4A-211ENST00000498562 STRN4Q9NRL3 753 aa37.25■■■■□ 3.55
CUL4A-211ENST00000498562 CPDO75976 1380 aa37.25■■■■□ 3.55
CUL4A-211ENST00000498562 BRD4O60885 1362 aaPredicted RBP37.24■■■■□ 3.55
CUL4A-211ENST00000498562 SSH2Q76I76 1423 aa37.24■■■■□ 3.55
CUL4A-211ENST00000498562 CAMTA1Q9Y6Y1 1673 aa37.24■■■■□ 3.55
CUL4A-211ENST00000498562 USP6P35125 1406 aa37.22■■■■□ 3.55
CUL4A-211ENST00000498562 FAM182BQ5T319 152 aa37.22■■■■□ 3.55
CUL4A-211ENST00000498562 TNS1Q9HBL0 1735 aaKnown RBP37.21■■■■□ 3.55
CUL4A-211ENST00000498562 BAG6P46379 1132 aa37.2■■■■□ 3.55
CUL4A-211ENST00000498562 ROCK2O75116 1388 aaKnown RBP37.19■■■■□ 3.54
CUL4A-211ENST00000498562 NEUROD1Q13562 356 aa37.19■■■■□ 3.54
CUL4A-211ENST00000498562 NLRP13Q86W25 1043 aa37.19■■■■□ 3.54
CUL4A-211ENST00000498562 CABP1Q9NZU7 370 aa37.19■■■■□ 3.54
CUL4A-211ENST00000498562 GCP02774 474 aa37.16■■■■□ 3.54
CUL4A-211ENST00000498562 PIK3C2AO00443 1686 aa37.15■■■■□ 3.54
CUL4A-211ENST00000498562 EVC2Q86UK5 1308 aa37.15■■■■□ 3.54
CUL4A-211ENST00000498562 SLIT3O75094 1523 aa37.15■■■■□ 3.54
CUL4A-211ENST00000498562 EVA1CP58658 441 aa37.13■■■■□ 3.53
CUL4A-211ENST00000498562 USP35Q9P2H5 1018 aa37.13■■■■□ 3.53
CUL4A-211ENST00000498562 DISP2A7MBM2 1401 aa37.12■■■■□ 3.53
CUL4A-211ENST00000498562 LARP1Q6PKG0 1096 aaKnown RBP37.12■■■■□ 3.53
CUL4A-211ENST00000498562 BARGINQ6ZT62 677 aa37.12■■■■□ 3.53
CUL4A-211ENST00000498562 COL5A2P05997 1499 aaPredicted RBP37.11■■■■□ 3.53
CUL4A-211ENST00000498562 AKAP12Q02952 1782 aa37.11■■■■□ 3.53
CUL4A-211ENST00000498562 EN1Q05925 392 aaPredicted RBP37.08■■■■□ 3.53
CUL4A-211ENST00000498562 NLRP6P59044 892 aa37.06■■■■□ 3.52
CUL4A-211ENST00000498562 TCP11L2Q8N4U5 519 aa37.05■■■■□ 3.52
CUL4A-211ENST00000498562 LRP5O75197 1615 aa37.05■■■■□ 3.52
CUL4A-211ENST00000498562 PARP4Q9UKK3 1724 aaKnown RBP37.05■■■■□ 3.52
CUL4A-211ENST00000498562 FAM196AQ6ZSG2 479 aa37.04■■■■□ 3.52
CUL4A-211ENST00000498562 COL18A1P39060 1754 aa37.02■■■■□ 3.52
CUL4A-211ENST00000498562 THRAP3Q9Y2W1 955 aaKnown RBP37.01■■■■□ 3.52
CUL4A-211ENST00000498562 AATKQ6ZMQ8 1374 aa37.01■■■■□ 3.51
CUL4A-211ENST00000498562 CRB1P82279 1406 aa37■■■■□ 3.51
CUL4A-211ENST00000498562 TRIM37O94972 964 aa36.99■■■■□ 3.51
CUL4A-211ENST00000498562 PSDA5PKW4 1024 aaPredicted RBP36.98■■■■□ 3.51
CUL4A-211ENST00000498562 PDE3BQ13370 1112 aa36.98■■■■□ 3.51
CUL4A-211ENST00000498562 ZNF692Q9BU19 519 aaPredicted RBP36.98■■■■□ 3.51
CUL4A-211ENST00000498562 TTC21BQ7Z4L5 1316 aa36.98■■■■□ 3.51
CUL4A-211ENST00000498562 SBNO2Q9Y2G9 1366 aa36.98■■■■□ 3.51
CUL4A-211ENST00000498562 CPSF1Q10570 1443 aaKnown RBP36.98■■■■□ 3.51
CUL4A-211ENST00000498562 ZBTB7CA1YPR0 619 aa36.97■■■■□ 3.51
CUL4A-211ENST00000498562 MON2Q7Z3U7 1717 aa36.96■■■■□ 3.51
CUL4A-211ENST00000498562 EZH2Q15910 746 aaKnown RBP36.95■■■■□ 3.51
CUL4A-211ENST00000498562 RREB1Q92766 1687 aa36.93■■■■□ 3.5
CUL4A-211ENST00000498562 LRRC37A3O60309 1634 aa36.92■■■■□ 3.5
CUL4A-211ENST00000498562 WNK3Q9BYP7 1800 aa36.92■■■■□ 3.5
CUL4A-211ENST00000498562 TTC21AQ8NDW8 1320 aa36.92■■■■□ 3.5
CUL4A-211ENST00000498562 CAMKK2Q96RR4 588 aa36.92■■■■□ 3.5
CUL4A-211ENST00000498562 KTN1Q86UP2 1357 aaKnown RBP36.9■■■■□ 3.5
CUL4A-211ENST00000498562 RGPD5Q99666 1765 aa36.89■■■■□ 3.5
CUL4A-211ENST00000498562 CARD11Q9BXL7 1154 aa36.89■■■■□ 3.5
CUL4A-211ENST00000498562 NFAT5O94916 1531 aa36.89■■■■□ 3.5
CUL4A-211ENST00000498562 PARD3Q8TEW0 1356 aa36.89■■■■□ 3.5
CUL4A-211ENST00000498562 PEAK1Q9H792 1746 aa36.88■■■■□ 3.49
CUL4A-211ENST00000498562 APBA3O96018 575 aa36.88■■■■□ 3.49
CUL4A-211ENST00000498562 AXIN2Q9Y2T1 843 aa36.88■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms