RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 CCDC27Q2M243 656 aa10.11□□□□□ -0.79
PMPCB-208ENST00000498530 ATP6V1AP38606 617 aa10.1□□□□□ -0.79
PMPCB-208ENST00000498530 RBM25P49756 843 aaKnown RBP10.1□□□□□ -0.79
PMPCB-208ENST00000498530 EIF4G2P78344 907 aaKnown RBP eCLIP10.1□□□□□ -0.79
PMPCB-208ENST00000498530 NR6A1Q15406 480 aa10.09□□□□□ -0.79
PMPCB-208ENST00000498530 TBC1D9Q6ZT07 1266 aa10.09□□□□□ -0.79
PMPCB-208ENST00000498530 RETREG3Q86VR2 466 aa10.09□□□□□ -0.79
PMPCB-208ENST00000498530 NFATC2IPQ8NCF5 419 aa10.09□□□□□ -0.79
PMPCB-208ENST00000498530 CARNS1A5YM72 827 aa10.08□□□□□ -0.8
PMPCB-208ENST00000498530 CFHP08603 1231 aa10.08□□□□□ -0.8
PMPCB-208ENST00000498530 HDGFP51858 240 aaKnown RBP10.08□□□□□ -0.8
PMPCB-208ENST00000498530 FAM98CQ17RN3 349 aaKnown RBP10.08□□□□□ -0.8
PMPCB-208ENST00000498530 ANKK1Q8NFD2 765 aa10.08□□□□□ -0.8
PMPCB-208ENST00000498530 BCAMP50895 628 aa10.07□□□□□ -0.8
PMPCB-208ENST00000498530 NR1H3Q13133 447 aa10.07□□□□□ -0.8
PMPCB-208ENST00000498530 ZNF428Q96B54 188 aa10.07□□□□□ -0.8
PMPCB-208ENST00000498530 PER1O15534 1290 aaPredicted RBP10.06□□□□□ -0.8
PMPCB-208ENST00000498530 E9PSI1 815 aa10.05□□□□□ -0.8
PMPCB-208ENST00000498530 KANK4Q5T7N3 995 aaPredicted RBP10.05□□□□□ -0.8
PMPCB-208ENST00000498530 LCE2BO14633 110 aa10.04□□□□□ -0.8
PMPCB-208ENST00000498530 SEPT9Q9UHD8 586 aaPredicted RBP10.04□□□□□ -0.8
PMPCB-208ENST00000498530 ZC3H4Q9UPT8 1303 aaKnown RBP10.04□□□□□ -0.8
PMPCB-208ENST00000498530 SOWAHBA6NEL2 793 aa10.03□□□□□ -0.8
PMPCB-208ENST00000498530 Q3C1V9 767 aa10.03□□□□□ -0.8
PMPCB-208ENST00000498530 LYPD8Q6UX82 237 aa10.03□□□□□ -0.8
PMPCB-208ENST00000498530 LAPTM4BQ86VI4 370 aa10.03□□□□□ -0.8
PMPCB-208ENST00000498530 PLEKHM2Q8IWE5 1019 aa10.03□□□□□ -0.8
PMPCB-208ENST00000498530 SYMPKQ92797 1274 aaKnown RBP10.03□□□□□ -0.8
PMPCB-208ENST00000498530 ZMIZ1Q9ULJ6 1067 aa10.03□□□□□ -0.8
PMPCB-208ENST00000498530 KMT5BQ4FZB7 885 aa10.02□□□□□ -0.81
PMPCB-208ENST00000498530 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
PMPCB-208ENST00000498530 MORN1Q5T089 497 aa10.02□□□□□ -0.81
PMPCB-208ENST00000498530 FBXO45P0C2W1 286 aa10.01□□□□□ -0.81
PMPCB-208ENST00000498530 NYAP1Q6ZVC0 841 aa10.01□□□□□ -0.81
PMPCB-208ENST00000498530 ZBBXA8MT70 800 aa10□□□□□ -0.81
PMPCB-208ENST00000498530 SAMD7Q7Z3H4 446 aa10□□□□□ -0.81
PMPCB-208ENST00000498530 WBP1LQ9NX94 342 aa10□□□□□ -0.81
PMPCB-208ENST00000498530 KCNC4Q03721 635 aa9.99□□□□□ -0.81
PMPCB-208ENST00000498530 TMEM164Q5U3C3 297 aa9.99□□□□□ -0.81
PMPCB-208ENST00000498530 TXNDC2Q86VQ3 553 aa9.99□□□□□ -0.81
PMPCB-208ENST00000498530 USP17L3A6NCW0 530 aa9.98□□□□□ -0.81
PMPCB-208ENST00000498530 USP17L4A6NCW7 530 aa9.98□□□□□ -0.81
PMPCB-208ENST00000498530 FAM196BA6NMK8 535 aa9.98□□□□□ -0.81
PMPCB-208ENST00000498530 ACTN4O43707 911 aaKnown RBP9.98□□□□□ -0.81
PMPCB-208ENST00000498530 USP17L2Q6R6M4 530 aa9.98□□□□□ -0.81
PMPCB-208ENST00000498530 USP17L1Q7RTZ2 530 aa9.98□□□□□ -0.81
PMPCB-208ENST00000498530 CCER1Q8TC90 406 aaPredicted RBP9.98□□□□□ -0.81
PMPCB-208ENST00000498530 ZFRQ96KR1 1074 aaKnown RBP9.98□□□□□ -0.81
PMPCB-208ENST00000498530 FKBPLQ9UIM3 349 aa9.98□□□□□ -0.81
PMPCB-208ENST00000498530 PIK3CDO00329 1044 aa9.97□□□□□ -0.81
PMPCB-208ENST00000498530 F12P00748 615 aaPredicted RBP9.97□□□□□ -0.81
PMPCB-208ENST00000498530 LAPTM4AQ15012 233 aa9.97□□□□□ -0.81
PMPCB-208ENST00000498530 STK32AQ8WU08 396 aa9.97□□□□□ -0.81
PMPCB-208ENST00000498530 NOVA2Q9UNW9 492 aaKnown RBP9.97□□□□□ -0.81
PMPCB-208ENST00000498530 SALL2Q9Y467 1007 aaPredicted RBP9.97□□□□□ -0.81
PMPCB-208ENST00000498530 USP17L5A8MUK1 530 aa9.96□□□□□ -0.82
PMPCB-208ENST00000498530 ZNF592Q92610 1267 aa9.96□□□□□ -0.82
PMPCB-208ENST00000498530 SLC27A5Q9Y2P5 690 aa9.96□□□□□ -0.82
PMPCB-208ENST00000498530 PHLDB3Q6NSJ2 640 aa9.95□□□□□ -0.82
PMPCB-208ENST00000498530 PRR14Q9BWN1 585 aa9.95□□□□□ -0.82
PMPCB-208ENST00000498530 TRAF7Q6Q0C0 670 aa9.94□□□□□ -0.82
PMPCB-208ENST00000498530 USP17L15C9J2P7 530 aa9.93□□□□□ -0.82
PMPCB-208ENST00000498530 USP17L10C9JJH3 530 aa9.93□□□□□ -0.82
PMPCB-208ENST00000498530 USP17L13C9JLJ4 530 aa9.93□□□□□ -0.82
PMPCB-208ENST00000498530 USP17L12C9JPN9 530 aa9.93□□□□□ -0.82
PMPCB-208ENST00000498530 USP17L11C9JVI0 530 aa9.93□□□□□ -0.82
PMPCB-208ENST00000498530 USP17L21D6R901 530 aa9.93□□□□□ -0.82
PMPCB-208ENST00000498530 USP17L18D6R9N7 530 aa9.93□□□□□ -0.82
PMPCB-208ENST00000498530 USP17L22D6RA61 530 aa9.93□□□□□ -0.82
PMPCB-208ENST00000498530 USP17L17D6RBQ6 530 aa9.93□□□□□ -0.82
PMPCB-208ENST00000498530 USP17L19D6RCP7 530 aa9.93□□□□□ -0.82
PMPCB-208ENST00000498530 USP17L20D6RJB6 530 aa9.93□□□□□ -0.82
PMPCB-208ENST00000498530 ERCC3P19447 782 aa9.93□□□□□ -0.82
PMPCB-208ENST00000498530 USP17L24Q0WX57 530 aa9.93□□□□□ -0.82
PMPCB-208ENST00000498530 USB1Q9BQ65 265 aaKnown RBP9.93□□□□□ -0.82
PMPCB-208ENST00000498530 GPSM3Q9Y4H4 160 aa9.93□□□□□ -0.82
PMPCB-208ENST00000498530 RBM47A0AV96 593 aaKnown RBP9.92□□□□□ -0.82
PMPCB-208ENST00000498530 LZTS3O60299 673 aaPredicted RBP9.92□□□□□ -0.82
PMPCB-208ENST00000498530 GFRA3O60609 400 aa9.92□□□□□ -0.82
PMPCB-208ENST00000498530 SKIP12755 728 aa9.92□□□□□ -0.82
PMPCB-208ENST00000498530 SSFA2P28290 1259 aa9.92□□□□□ -0.82
PMPCB-208ENST00000498530 MCCD1P59942 119 aaPredicted RBP9.92□□□□□ -0.82
PMPCB-208ENST00000498530 PTPRNQ16849 979 aa9.92□□□□□ -0.82
PMPCB-208ENST00000498530 FAM174AQ8TBP5 190 aa9.92□□□□□ -0.82
PMPCB-208ENST00000498530 CLP1Q92989 425 aaKnown RBP9.92□□□□□ -0.82
PMPCB-208ENST00000498530 RNF40O75150 1001 aa9.91□□□□□ -0.82
PMPCB-208ENST00000498530 RNF19BQ6ZMZ0 732 aa9.91□□□□□ -0.82
PMPCB-208ENST00000498530 ATP5J2-PTCD1G3V325 749 aa9.9□□□□□ -0.82
PMPCB-208ENST00000498530 ARID4AP29374 1257 aaPredicted RBP9.9□□□□□ -0.82
PMPCB-208ENST00000498530 PTK7Q13308 1070 aa9.9□□□□□ -0.82
PMPCB-208ENST00000498530 PUS10Q3MIT2 529 aaKnown RBP9.9□□□□□ -0.82
PMPCB-208ENST00000498530 CRTC2Q53ET0 693 aaPredicted RBP9.9□□□□□ -0.82
PMPCB-208ENST00000498530 GPKOWQ92917 476 aaPredicted RBP eCLIP9.9□□□□□ -0.82
PMPCB-208ENST00000498530 FAM69CQ0P6D2 419 aa9.89□□□□□ -0.83
PMPCB-208ENST00000498530 BRICD5Q6PL45 260 aa9.89□□□□□ -0.83
PMPCB-208ENST00000498530 BLOC1S3Q6QNY0 202 aa9.89□□□□□ -0.83
PMPCB-208ENST00000498530 TSR3Q9UJK0 312 aaKnown RBP9.89□□□□□ -0.83
PMPCB-208ENST00000498530 CHIC2Q9UKJ5 165 aa9.89□□□□□ -0.83
PMPCB-208ENST00000498530 IGSF3O75054 1194 aa9.88□□□□□ -0.83
PMPCB-208ENST00000498530 JUNDP17535 347 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms