RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 ADGRL3Q9HAR2 1447 aa23.68■■□□□ 1.38
CHRNA4-206ENST00000498043 PMFBP1Q8TBY8 1022 aa23.68■■□□□ 1.38
CHRNA4-206ENST00000498043 ZRANB1Q9UGI0 708 aa23.68■■□□□ 1.38
CHRNA4-206ENST00000498043 COL3A1P02461 1466 aaPredicted RBP23.66■■□□□ 1.38
CHRNA4-206ENST00000498043 LMTK3Q96Q04 1460 aa23.66■■□□□ 1.38
CHRNA4-206ENST00000498043 NUDCQ9Y266 331 aa23.65■■□□□ 1.38
CHRNA4-206ENST00000498043 SUPT16HQ9Y5B9 1047 aaKnown RBP23.64■■□□□ 1.38
CHRNA4-206ENST00000498043 MAP2P11137 1827 aaKnown RBP23.64■■□□□ 1.37
CHRNA4-206ENST00000498043 TTC21BQ7Z4L5 1316 aa23.64■■□□□ 1.37
CHRNA4-206ENST00000498043 COG3Q96JB2 828 aa23.63■■□□□ 1.37
CHRNA4-206ENST00000498043 FBLN1P23142 703 aa23.63■■□□□ 1.37
CHRNA4-206ENST00000498043 C14orf37Q86TY3 774 aa23.63■■□□□ 1.37
CHRNA4-206ENST00000498043 NGDNQ8NEJ9 315 aaKnown RBP23.63■■□□□ 1.37
CHRNA4-206ENST00000498043 STRCP1A6NGW2 1772 aa23.61■■□□□ 1.37
CHRNA4-206ENST00000498043 NEFLP07196 543 aa23.61■■□□□ 1.37
CHRNA4-206ENST00000498043 SSH2Q76I76 1423 aa23.61■■□□□ 1.37
CHRNA4-206ENST00000498043 OVOS2A0A0J9YW53 1432 aa23.59■■□□□ 1.37
CHRNA4-206ENST00000498043 OVOS2Q6IE36 1432 aa23.59■■□□□ 1.37
CHRNA4-206ENST00000498043 FKBP8Q14318 412 aa23.59■■□□□ 1.37
CHRNA4-206ENST00000498043 APAF1O14727 1248 aa23.58■■□□□ 1.37
CHRNA4-206ENST00000498043 PPM1GO15355 546 aaPredicted RBP23.58■■□□□ 1.37
CHRNA4-206ENST00000498043 POLKQ9UBT6 870 aa23.58■■□□□ 1.37
CHRNA4-206ENST00000498043 PIK3C2AO00443 1686 aa23.57■■□□□ 1.36
CHRNA4-206ENST00000498043 PDE3BQ13370 1112 aa23.57■■□□□ 1.36
CHRNA4-206ENST00000498043 PROSER2Q86WR7 435 aaPredicted RBP23.57■■□□□ 1.36
CHRNA4-206ENST00000498043 STRCQ7RTU9 1775 aa23.57■■□□□ 1.36
CHRNA4-206ENST00000498043 PNPLA6Q8IY17 1366 aa23.57■■□□□ 1.36
CHRNA4-206ENST00000498043 CDCA7LQ96GN5 454 aa23.56■■□□□ 1.36
CHRNA4-206ENST00000498043 AATKQ6ZMQ8 1374 aa23.56■■□□□ 1.36
CHRNA4-206ENST00000498043 U2AF1L5P0DN76 240 aaPredicted RBP23.56■■□□□ 1.36
CHRNA4-206ENST00000498043 U2AF1Q01081 240 aaKnown RBP eCLIP23.56■■□□□ 1.36
CHRNA4-206ENST00000498043 EMILIN1Q9Y6C2 1016 aa23.56■■□□□ 1.36
CHRNA4-206ENST00000498043 IQSEC2Q5JU85 1478 aa23.55■■□□□ 1.36
CHRNA4-206ENST00000498043 CDK12Q9NYV4 1490 aaPredicted RBP23.55■■□□□ 1.36
CHRNA4-206ENST00000498043 U2SURPO15042 1029 aaKnown RBP23.55■■□□□ 1.36
CHRNA4-206ENST00000498043 TTC21AQ8NDW8 1320 aa23.54■■□□□ 1.36
CHRNA4-206ENST00000498043 RRS1Q15050 365 aaKnown RBP23.53■■□□□ 1.36
CHRNA4-206ENST00000498043 PHF8Q9UPP1 1060 aa23.53■■□□□ 1.36
CHRNA4-206ENST00000498043 DIAPH1O60610 1272 aaKnown RBP23.52■■□□□ 1.36
CHRNA4-206ENST00000498043 RUNDC1Q96C34 613 aa23.52■■□□□ 1.36
CHRNA4-206ENST00000498043 ZNF521Q96K83 1311 aa23.52■■□□□ 1.36
CHRNA4-206ENST00000498043 IRX6P78412 446 aaPredicted RBP23.5■■□□□ 1.35
CHRNA4-206ENST00000498043 ESCO1Q5FWF5 840 aa23.5■■□□□ 1.35
CHRNA4-206ENST00000498043 MARF1Q9Y4F3 1742 aaKnown RBP23.49■■□□□ 1.35
CHRNA4-206ENST00000498043 TMEM94Q12767 1356 aa23.49■■□□□ 1.35
CHRNA4-206ENST00000498043 USP31Q70CQ4 1352 aa23.48■■□□□ 1.35
CHRNA4-206ENST00000498043 SOX12O15370 315 aa23.47■■□□□ 1.35
CHRNA4-206ENST00000498043 LRRC7Q96NW7 1537 aa23.47■■□□□ 1.35
CHRNA4-206ENST00000498043 PEAK1Q9H792 1746 aa23.47■■□□□ 1.35
CHRNA4-206ENST00000498043 TCP11L2Q8N4U5 519 aa23.47■■□□□ 1.35
CHRNA4-206ENST00000498043 RRP7AQ9Y3A4 280 aaKnown RBP23.47■■□□□ 1.35
CHRNA4-206ENST00000498043 USP54Q70EL1 1684 aa23.47■■□□□ 1.35
CHRNA4-206ENST00000498043 PAK3O75914 559 aaPredicted RBP23.45■■□□□ 1.35
CHRNA4-206ENST00000498043 NEUROD2Q15784 382 aa23.45■■□□□ 1.35
CHRNA4-206ENST00000498043 GOLGA2Q08379 1002 aa23.45■■□□□ 1.34
CHRNA4-206ENST00000498043 C19orf44Q9H6X5 657 aa23.44■■□□□ 1.34
CHRNA4-206ENST00000498043 NUTM2GQ5VZR2 741 aa23.44■■□□□ 1.34
CHRNA4-206ENST00000498043 NGEFQ8N5V2 710 aa23.44■■□□□ 1.34
CHRNA4-206ENST00000498043 ORAI2Q96SN7 254 aa23.44■■□□□ 1.34
CHRNA4-206ENST00000498043 KIF1AQ12756 1690 aa23.42■■□□□ 1.34
CHRNA4-206ENST00000498043 C1orf167Q5SNV9 1468 aa23.42■■□□□ 1.34
CHRNA4-206ENST00000498043 XIRP1Q702N8 1843 aaKnown RBP23.42■■□□□ 1.34
CHRNA4-206ENST00000498043 NLRP6P59044 892 aa23.42■■□□□ 1.34
CHRNA4-206ENST00000498043 PLEKHF1Q96S99 279 aa23.42■■□□□ 1.34
CHRNA4-206ENST00000498043 ABTB2Q8N961 1025 aa23.41■■□□□ 1.34
CHRNA4-206ENST00000498043 MAPK8IP3Q9UPT6 1336 aa23.41■■□□□ 1.34
CHRNA4-206ENST00000498043 IL13P35225 146 aa23.4■■□□□ 1.34
CHRNA4-206ENST00000498043 WWC1Q8IX03 1113 aa23.4■■□□□ 1.34
CHRNA4-206ENST00000498043 DMRT2Q9Y5R5 561 aa23.4■■□□□ 1.34
CHRNA4-206ENST00000498043 DCCP43146 1447 aa23.4■■□□□ 1.34
CHRNA4-206ENST00000498043 PSME1Q06323 249 aa23.4■■□□□ 1.34
CHRNA4-206ENST00000498043 RCAN3Q9UKA8 241 aa23.4■■□□□ 1.34
CHRNA4-206ENST00000498043 NCOA3Q9Y6Q9 1424 aa23.39■■□□□ 1.34
CHRNA4-206ENST00000498043 DUSP27Q5VZP5 1158 aa23.39■■□□□ 1.34
CHRNA4-206ENST00000498043 MST1RQ04912 1400 aa23.39■■□□□ 1.33
CHRNA4-206ENST00000498043 SPINK5Q9NQ38 1064 aaPredicted RBP23.39■■□□□ 1.33
CHRNA4-206ENST00000498043 ATF3P18847 181 aa23.38■■□□□ 1.33
CHRNA4-206ENST00000498043 SLFN5Q08AF3 891 aa23.38■■□□□ 1.33
CHRNA4-206ENST00000498043 MAP3K19Q56UN5 1328 aa23.38■■□□□ 1.33
CHRNA4-206ENST00000498043 HMOX1P09601 288 aa23.37■■□□□ 1.33
CHRNA4-206ENST00000498043 RNF123Q5XPI4 1314 aa23.37■■□□□ 1.33
CHRNA4-206ENST00000498043 FOXO3O43524 673 aa23.37■■□□□ 1.33
CHRNA4-206ENST00000498043 XPCQ01831 940 aaPredicted RBP23.37■■□□□ 1.33
CHRNA4-206ENST00000498043 RSPH6AQ9H0K4 717 aa23.37■■□□□ 1.33
CHRNA4-206ENST00000498043 TRPM3Q9HCF6 1732 aaPredicted RBP23.36■■□□□ 1.33
CHRNA4-206ENST00000498043 PRKAR2BP31323 418 aa23.36■■□□□ 1.33
CHRNA4-206ENST00000498043 FCHSD2O94868 740 aa23.35■■□□□ 1.33
CHRNA4-206ENST00000498043 PHF23Q9BUL5 403 aaPredicted RBP23.35■■□□□ 1.33
CHRNA4-206ENST00000498043 PNNQ9H307 717 aaKnown RBP23.35■■□□□ 1.33
CHRNA4-206ENST00000498043 ZNF335Q9H4Z2 1342 aaPredicted RBP23.35■■□□□ 1.33
CHRNA4-206ENST00000498043 MSH6P52701 1360 aa23.34■■□□□ 1.33
CHRNA4-206ENST00000498043 EIF4A2Q14240 407 aaKnown RBP23.34■■□□□ 1.33
CHRNA4-206ENST00000498043 HSP90AB2PQ58FF8 381 aa23.34■■□□□ 1.33
CHRNA4-206ENST00000498043 SBNO1A3KN83 1393 aa23.34■■□□□ 1.33
CHRNA4-206ENST00000498043 FLT4P35916 1363 aa23.34■■□□□ 1.33
CHRNA4-206ENST00000498043 E9PSI1 815 aa23.34■■□□□ 1.33
CHRNA4-206ENST00000498043 CCDC27Q2M243 656 aa23.33■■□□□ 1.33
CHRNA4-206ENST00000498043 LTN1O94822 1766 aa23.33■■□□□ 1.33
CHRNA4-206ENST00000498043 RGPD1P0DJD0 1748 aa23.33■■□□□ 1.32
CHRNA4-206ENST00000498043 TMPOP42166 694 aaKnown RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms