RNA–Protein interactions for RNA: ENST00000497506.5

FAM3A-220, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-220ENST00000497506 BRD4O60885 1362 aaPredicted RBP22.62■■□□□ 1.21
FAM3A-220ENST00000497506 C11orf95C9JLR9 678 aaPredicted RBP22.61■■□□□ 1.21
FAM3A-220ENST00000497506 MYOM1P52179 1685 aa22.61■■□□□ 1.21
FAM3A-220ENST00000497506 NRKQ7Z2Y5 1582 aa22.6■■□□□ 1.21
FAM3A-220ENST00000497506 ZEB1P37275 1124 aaPredicted RBP22.6■■□□□ 1.21
FAM3A-220ENST00000497506 LMOD2Q6P5Q4 547 aa22.6■■□□□ 1.21
FAM3A-220ENST00000497506 KTN1Q86UP2 1357 aaKnown RBP22.6■■□□□ 1.21
FAM3A-220ENST00000497506 NUTM2BA6NNL0 878 aaPredicted RBP22.59■■□□□ 1.21
FAM3A-220ENST00000497506 NUTM2EB1AL46 878 aaPredicted RBP22.59■■□□□ 1.21
FAM3A-220ENST00000497506 NUTM2AQ8IVF1 878 aaPredicted RBP22.59■■□□□ 1.21
FAM3A-220ENST00000497506 TERF2IPQ9NYB0 399 aa22.58■■□□□ 1.21
FAM3A-220ENST00000497506 A0A1W2PP64 1363 aa22.58■■□□□ 1.21
FAM3A-220ENST00000497506 ABCA3Q99758 1704 aa22.57■■□□□ 1.2
FAM3A-220ENST00000497506 HDGFL2Q7Z4V5 671 aaPredicted RBP22.57■■□□□ 1.2
FAM3A-220ENST00000497506 CRYBG1Q9Y4K1 1723 aa22.57■■□□□ 1.2
FAM3A-220ENST00000497506 TTC21BQ7Z4L5 1316 aa22.56■■□□□ 1.2
FAM3A-220ENST00000497506 CABLES1Q8TDN4 633 aa22.55■■□□□ 1.2
FAM3A-220ENST00000497506 ANKRD36BQ8N2N9 1353 aa22.54■■□□□ 1.2
FAM3A-220ENST00000497506 ABTB2Q8N961 1025 aa22.54■■□□□ 1.2
FAM3A-220ENST00000497506 PIK3C2AO00443 1686 aa22.54■■□□□ 1.2
FAM3A-220ENST00000497506 NUTM2GQ5VZR2 741 aa22.53■■□□□ 1.2
FAM3A-220ENST00000497506 POLR3GLQ9BT43 218 aa22.53■■□□□ 1.2
FAM3A-220ENST00000497506 MARF1Q9Y4F3 1742 aaKnown RBP22.53■■□□□ 1.2
FAM3A-220ENST00000497506 EDC4Q6P2E9 1401 aaKnown RBP22.52■■□□□ 1.2
FAM3A-220ENST00000497506 TTC21AQ8NDW8 1320 aa22.52■■□□□ 1.2
FAM3A-220ENST00000497506 PLEKHG5O94827 1062 aa22.51■■□□□ 1.19
FAM3A-220ENST00000497506 ADAMTS2O95450 1211 aa22.51■■□□□ 1.19
FAM3A-220ENST00000497506 KIF7Q2M1P5 1343 aa22.51■■□□□ 1.19
FAM3A-220ENST00000497506 PHRF1Q9P1Y6 1649 aaKnown RBP22.5■■□□□ 1.19
FAM3A-220ENST00000497506 MEX3CQ5U5Q3 659 aaKnown RBP22.49■■□□□ 1.19
FAM3A-220ENST00000497506 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.49■■□□□ 1.19
FAM3A-220ENST00000497506 USP19O94966 1318 aa22.49■■□□□ 1.19
FAM3A-220ENST00000497506 NLRP13Q86W25 1043 aa22.48■■□□□ 1.19
FAM3A-220ENST00000497506 NLRP6P59044 892 aa22.47■■□□□ 1.19
FAM3A-220ENST00000497506 CARD14Q9BXL6 1004 aa22.47■■□□□ 1.19
FAM3A-220ENST00000497506 USP54Q70EL1 1684 aa22.46■■□□□ 1.19
FAM3A-220ENST00000497506 HAP1P54257 671 aaPredicted RBP22.46■■□□□ 1.19
FAM3A-220ENST00000497506 NME9Q86XW9 330 aa22.46■■□□□ 1.19
FAM3A-220ENST00000497506 C8orf37Q96NL8 207 aa22.45■■□□□ 1.18
FAM3A-220ENST00000497506 RGS17Q9UGC6 210 aaPredicted RBP22.45■■□□□ 1.18
FAM3A-220ENST00000497506 ZRANB1Q9UGI0 708 aa22.45■■□□□ 1.18
FAM3A-220ENST00000497506 WASHC2AQ641Q2 1341 aa22.45■■□□□ 1.18
FAM3A-220ENST00000497506 USP31Q70CQ4 1352 aa22.45■■□□□ 1.18
FAM3A-220ENST00000497506 CCDC7Q96M83 1385 aa22.45■■□□□ 1.18
FAM3A-220ENST00000497506 SLIT3O75094 1523 aa22.45■■□□□ 1.18
FAM3A-220ENST00000497506 PHF23Q9BUL5 403 aaPredicted RBP22.43■■□□□ 1.18
FAM3A-220ENST00000497506 NGLY1Q96IV0 654 aa22.42■■□□□ 1.18
FAM3A-220ENST00000497506 NSD3Q9BZ95 1437 aa22.41■■□□□ 1.18
FAM3A-220ENST00000497506 AFF2P51816 1311 aa22.41■■□□□ 1.18
FAM3A-220ENST00000497506 GCP02774 474 aa22.41■■□□□ 1.18
FAM3A-220ENST00000497506 PANK3Q9H999 370 aa22.41■■□□□ 1.18
FAM3A-220ENST00000497506 OVOS2A0A0J9YW53 1432 aa22.4■■□□□ 1.18
FAM3A-220ENST00000497506 OVOS2Q6IE36 1432 aa22.4■■□□□ 1.18
FAM3A-220ENST00000497506 KIF20BQ96Q89 1820 aa22.39■■□□□ 1.17
FAM3A-220ENST00000497506 FAM83GA6ND36 823 aa22.39■■□□□ 1.17
FAM3A-220ENST00000497506 FYB1O15117 783 aa22.39■■□□□ 1.17
FAM3A-220ENST00000497506 ZC3H6P61129 1189 aaKnown RBP22.39■■□□□ 1.17
FAM3A-220ENST00000497506 FNBP4Q8N3X1 1017 aaPredicted RBP22.39■■□□□ 1.17
FAM3A-220ENST00000497506 PLCH1Q4KWH8 1693 aa22.38■■□□□ 1.17
FAM3A-220ENST00000497506 COL14A1Q05707 1796 aaKnown RBP22.38■■□□□ 1.17
FAM3A-220ENST00000497506 KIAA0232Q92628 1395 aa22.38■■□□□ 1.17
FAM3A-220ENST00000497506 SLIT2O94813 1529 aa22.37■■□□□ 1.17
FAM3A-220ENST00000497506 CPDO75976 1380 aa22.37■■□□□ 1.17
FAM3A-220ENST00000497506 NFAT5O94916 1531 aa22.36■■□□□ 1.17
FAM3A-220ENST00000497506 BCL9LQ86UU0 1499 aa22.35■■□□□ 1.17
FAM3A-220ENST00000497506 NWD2Q9ULI1 1742 aa22.35■■□□□ 1.17
FAM3A-220ENST00000497506 ZNF772Q68DY9 489 aaPredicted RBP22.35■■□□□ 1.17
FAM3A-220ENST00000497506 KCNH5Q8NCM2 988 aa22.35■■□□□ 1.17
FAM3A-220ENST00000497506 GGNBP2Q9H3C7 697 aa22.35■■□□□ 1.17
FAM3A-220ENST00000497506 PRDM11Q9NQV5 511 aa22.35■■□□□ 1.17
FAM3A-220ENST00000497506 POTEAQ6S8J7 498 aa22.34■■□□□ 1.17
FAM3A-220ENST00000497506 CHRNA2Q15822 529 aa22.33■■□□□ 1.17
FAM3A-220ENST00000497506 COG3Q96JB2 828 aa22.33■■□□□ 1.17
FAM3A-220ENST00000497506 USP21Q9UK80 565 aa22.33■■□□□ 1.17
FAM3A-220ENST00000497506 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.33■■□□□ 1.17
FAM3A-220ENST00000497506 CGNL1Q0VF96 1302 aa22.32■■□□□ 1.16
FAM3A-220ENST00000497506 SOX12O15370 315 aa22.32■■□□□ 1.16
FAM3A-220ENST00000497506 NRAPQ86VF7 1730 aa22.31■■□□□ 1.16
FAM3A-220ENST00000497506 COL18A1P39060 1754 aa22.31■■□□□ 1.16
FAM3A-220ENST00000497506 LMO7Q8WWI1 1683 aa22.31■■□□□ 1.16
FAM3A-220ENST00000497506 ARHGEF25Q86VW2 580 aa22.31■■□□□ 1.16
FAM3A-220ENST00000497506 UNC5CLQ8IV45 518 aa22.3■■□□□ 1.16
FAM3A-220ENST00000497506 BTG4Q9NY30 223 aa22.3■■□□□ 1.16
FAM3A-220ENST00000497506 PER1O15534 1290 aaPredicted RBP22.29■■□□□ 1.16
FAM3A-220ENST00000497506 ANKRD26Q9UPS8 1709 aa22.28■■□□□ 1.16
FAM3A-220ENST00000497506 AATKQ6ZMQ8 1374 aa22.28■■□□□ 1.16
FAM3A-220ENST00000497506 LTN1O94822 1766 aa22.28■■□□□ 1.16
FAM3A-220ENST00000497506 CAMTA1Q9Y6Y1 1673 aa22.28■■□□□ 1.16
FAM3A-220ENST00000497506 QTRT2Q9H974 415 aaKnown RBP22.28■■□□□ 1.16
FAM3A-220ENST00000497506 ATRNO75882 1429 aa22.28■■□□□ 1.16
FAM3A-220ENST00000497506 ZBTB7CA1YPR0 619 aa22.27■■□□□ 1.16
FAM3A-220ENST00000497506 KNSTRNQ9Y448 316 aa22.27■■□□□ 1.16
FAM3A-220ENST00000497506 TRPC5Q9UL62 973 aaPredicted RBP22.26■■□□□ 1.15
FAM3A-220ENST00000497506 FBLN1P23142 703 aa22.25■■□□□ 1.15
FAM3A-220ENST00000497506 RGPD5Q99666 1765 aa22.25■■□□□ 1.15
FAM3A-220ENST00000497506 AMER1Q5JTC6 1135 aaPredicted RBP22.24■■□□□ 1.15
FAM3A-220ENST00000497506 NSD2O96028 1365 aa22.24■■□□□ 1.15
FAM3A-220ENST00000497506 ABCC6O95255 1503 aa22.23■■□□□ 1.15
FAM3A-220ENST00000497506 AXIN2Q9Y2T1 843 aa22.23■■□□□ 1.15
FAM3A-220ENST00000497506 VPS72Q15906 364 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms