RNA–Protein interactions for RNA: ENST00000497483.1

HDAC10-219, Transcript of histone deacetylase 10, humanhuman

TSL 2

Gene HDAC10, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-219ENST00000497483 COL14A1Q05707 1796 aaKnown RBP35.65■■■■□ 3.3
HDAC10-219ENST00000497483 RALGAPBQ86X10 1494 aa35.64■■■■□ 3.3
HDAC10-219ENST00000497483 PHRF1Q9P1Y6 1649 aaKnown RBP35.64■■■■□ 3.3
HDAC10-219ENST00000497483 ROCK2O75116 1388 aaKnown RBP35.62■■■■□ 3.29
HDAC10-219ENST00000497483 PLEKHG3A1L390 1219 aa35.61■■■■□ 3.29
HDAC10-219ENST00000497483 TRIM26Q12899 539 aaPredicted RBP35.61■■■■□ 3.29
HDAC10-219ENST00000497483 ATAD2Q6PL18 1390 aa35.6■■■■□ 3.29
HDAC10-219ENST00000497483 ACEP12821 1306 aa35.58■■■■□ 3.29
HDAC10-219ENST00000497483 PLEKHG5O94827 1062 aa35.57■■■■□ 3.28
HDAC10-219ENST00000497483 PPIP5K1Q6PFW1 1433 aa35.57■■■■□ 3.28
HDAC10-219ENST00000497483 PAK3O75914 559 aaPredicted RBP35.56■■■■□ 3.28
HDAC10-219ENST00000497483 SRPK2P78362 688 aaKnown RBP35.55■■■■□ 3.28
HDAC10-219ENST00000497483 VPS72Q15906 364 aa35.55■■■■□ 3.28
HDAC10-219ENST00000497483 FAM83GA6ND36 823 aa35.53■■■■□ 3.28
HDAC10-219ENST00000497483 NBPF8Q3BBV2 869 aa35.53■■■■□ 3.28
HDAC10-219ENST00000497483 BRWD3Q6RI45 1802 aa35.52■■■■□ 3.28
HDAC10-219ENST00000497483 CABP2Q9NPB3 220 aa35.5■■■■□ 3.27
HDAC10-219ENST00000497483 NRKQ7Z2Y5 1582 aa35.49■■■■□ 3.27
HDAC10-219ENST00000497483 BRD4O60885 1362 aaPredicted RBP35.49■■■■□ 3.27
HDAC10-219ENST00000497483 TONSLQ96HA7 1378 aa35.49■■■■□ 3.27
HDAC10-219ENST00000497483 EP400Q96L91 3159 aa35.48■■■■□ 3.27
HDAC10-219ENST00000497483 EVC2Q86UK5 1308 aa35.47■■■■□ 3.27
HDAC10-219ENST00000497483 SBNO2Q9Y2G9 1366 aa35.45■■■■□ 3.27
HDAC10-219ENST00000497483 BTG4Q9NY30 223 aa35.43■■■■□ 3.26
HDAC10-219ENST00000497483 USP6P35125 1406 aa35.42■■■■□ 3.26
HDAC10-219ENST00000497483 AKAP12Q02952 1782 aa35.42■■■■□ 3.26
HDAC10-219ENST00000497483 PRDM11Q9NQV5 511 aa35.41■■■■□ 3.26
HDAC10-219ENST00000497483 KIAA0232Q92628 1395 aa35.4■■■■□ 3.26
HDAC10-219ENST00000497483 USP19O94966 1318 aa35.4■■■■□ 3.26
HDAC10-219ENST00000497483 ONECUT3O60422 494 aaPredicted RBP35.4■■■■□ 3.26
HDAC10-219ENST00000497483 CCDC9Q9Y3X0 531 aaKnown RBP35.38■■■■□ 3.25
HDAC10-219ENST00000497483 ABTB2Q8N961 1025 aa35.37■■■■□ 3.25
HDAC10-219ENST00000497483 CABP1Q9NZU7 370 aa35.37■■■■□ 3.25
HDAC10-219ENST00000497483 NUTM2GQ5VZR2 741 aa35.36■■■■□ 3.25
HDAC10-219ENST00000497483 LMO7Q8WWI1 1683 aa35.36■■■■□ 3.25
HDAC10-219ENST00000497483 SSH2Q76I76 1423 aa35.35■■■■□ 3.25
HDAC10-219ENST00000497483 SEPT12Q8IYM1 358 aa35.35■■■■□ 3.25
HDAC10-219ENST00000497483 PIK3C2AO00443 1686 aa35.35■■■■□ 3.25
HDAC10-219ENST00000497483 CPDO75976 1380 aa35.35■■■■□ 3.25
HDAC10-219ENST00000497483 CARD11Q9BXL7 1154 aa35.34■■■■□ 3.25
HDAC10-219ENST00000497483 THSD7AQ9UPZ6 1657 aa35.33■■■■□ 3.25
HDAC10-219ENST00000497483 SLIT3O75094 1523 aa35.32■■■■□ 3.24
HDAC10-219ENST00000497483 NLRP13Q86W25 1043 aa35.31■■■■□ 3.24
HDAC10-219ENST00000497483 CCDC125Q86Z20 511 aa35.31■■■■□ 3.24
HDAC10-219ENST00000497483 SPATA31A5Q5VU36 1347 aa35.31■■■■□ 3.24
HDAC10-219ENST00000497483 SPATA31A7Q8IWB4 1347 aa35.31■■■■□ 3.24
HDAC10-219ENST00000497483 MON2Q7Z3U7 1717 aa35.3■■■■□ 3.24
HDAC10-219ENST00000497483 ZC3H6P61129 1189 aaKnown RBP35.27■■■■□ 3.24
HDAC10-219ENST00000497483 CHRNA2Q15822 529 aa35.27■■■■□ 3.24
HDAC10-219ENST00000497483 CPSF1Q10570 1443 aaKnown RBP35.26■■■■□ 3.24
HDAC10-219ENST00000497483 BLMP54132 1417 aaPredicted RBP35.25■■■■□ 3.23
HDAC10-219ENST00000497483 CAMTA1Q9Y6Y1 1673 aa35.25■■■■□ 3.23
HDAC10-219ENST00000497483 FAM98CQ17RN3 349 aaKnown RBP35.24■■■■□ 3.23
HDAC10-219ENST00000497483 KRT27Q7Z3Y8 459 aa35.23■■■■□ 3.23
HDAC10-219ENST00000497483 ZNF692Q9BU19 519 aaPredicted RBP35.23■■■■□ 3.23
HDAC10-219ENST00000497483 GCP02774 474 aa35.22■■■■□ 3.23
HDAC10-219ENST00000497483 SPATA31A1Q5TZJ5 1347 aa35.21■■■■□ 3.23
HDAC10-219ENST00000497483 USP54Q70EL1 1684 aa35.19■■■■□ 3.22
HDAC10-219ENST00000497483 TTC21AQ8NDW8 1320 aa35.18■■■■□ 3.22
HDAC10-219ENST00000497483 A0A0G2JS52 829 aa35.18■■■■□ 3.22
HDAC10-219ENST00000497483 NLRP6P59044 892 aa35.18■■■■□ 3.22
HDAC10-219ENST00000497483 MYT1Q01538 1121 aa35.18■■■■□ 3.22
HDAC10-219ENST00000497483 STRN4Q9NRL3 753 aa35.17■■■■□ 3.22
HDAC10-219ENST00000497483 TTC21BQ7Z4L5 1316 aa35.16■■■■□ 3.22
HDAC10-219ENST00000497483 COL5A2P05997 1499 aaPredicted RBP35.16■■■■□ 3.22
HDAC10-219ENST00000497483 COL18A1P39060 1754 aa35.15■■■■□ 3.22
HDAC10-219ENST00000497483 CD163L1Q9NR16 1453 aa35.15■■■■□ 3.22
HDAC10-219ENST00000497483 KTN1Q86UP2 1357 aaKnown RBP35.14■■■■□ 3.22
HDAC10-219ENST00000497483 AATKQ6ZMQ8 1374 aa35.13■■■■□ 3.21
HDAC10-219ENST00000497483 RGPD1P0DJD0 1748 aa35.12■■■■□ 3.21
HDAC10-219ENST00000497483 PUS7Q96PZ0 661 aaKnown RBP35.11■■■■□ 3.21
HDAC10-219ENST00000497483 EVA1CP58658 441 aa35.09■■■■□ 3.21
HDAC10-219ENST00000497483 NFAT5O94916 1531 aa35.09■■■■□ 3.21
HDAC10-219ENST00000497483 BARGINQ6ZT62 677 aa35.08■■■■□ 3.21
HDAC10-219ENST00000497483 PARP4Q9UKK3 1724 aaKnown RBP35.07■■■■□ 3.2
HDAC10-219ENST00000497483 CLSPNQ9HAW4 1339 aa35.06■■■■□ 3.2
HDAC10-219ENST00000497483 LARP1Q6PKG0 1096 aaKnown RBP35.06■■■■□ 3.2
HDAC10-219ENST00000497483 TESK2Q96S53 571 aa35.06■■■■□ 3.2
HDAC10-219ENST00000497483 ABCC6O95255 1503 aa35.06■■■■□ 3.2
HDAC10-219ENST00000497483 SF3B2Q13435 895 aaKnown RBP35.05■■■■□ 3.2
HDAC10-219ENST00000497483 TNS1Q9HBL0 1735 aaKnown RBP35.05■■■■□ 3.2
HDAC10-219ENST00000497483 KCNH5Q8NCM2 988 aa35.04■■■■□ 3.2
HDAC10-219ENST00000497483 CRB1P82279 1406 aa35.04■■■■□ 3.2
HDAC10-219ENST00000497483 WNK3Q9BYP7 1800 aa35.04■■■■□ 3.2
HDAC10-219ENST00000497483 USP31Q70CQ4 1352 aa35.03■■■■□ 3.2
HDAC10-219ENST00000497483 NINLQ9Y2I6 1382 aa35.03■■■■□ 3.2
HDAC10-219ENST00000497483 RGPD5Q99666 1765 aa35.03■■■■□ 3.2
HDAC10-219ENST00000497483 THRAP3Q9Y2W1 955 aaKnown RBP35.03■■■■□ 3.2
HDAC10-219ENST00000497483 ST20-MTHFSA0A0A6YYL1 179 aa35.02■■■■□ 3.2
HDAC10-219ENST00000497483 SLC24A1O60721 1099 aa35.02■■■■□ 3.2
HDAC10-219ENST00000497483 EDC4Q6P2E9 1401 aaKnown RBP35.02■■■■□ 3.2
HDAC10-219ENST00000497483 TCP11L2Q8N4U5 519 aa35.02■■■■□ 3.2
HDAC10-219ENST00000497483 USP35Q9P2H5 1018 aa35.01■■■■□ 3.2
HDAC10-219ENST00000497483 HDGFL2Q7Z4V5 671 aaPredicted RBP34.99■■■■□ 3.19
HDAC10-219ENST00000497483 ARHGEF25Q86VW2 580 aa34.99■■■■□ 3.19
HDAC10-219ENST00000497483 TIMELESSQ9UNS1 1208 aa34.99■■■■□ 3.19
HDAC10-219ENST00000497483 A0A1W2PP64 1363 aa34.99■■■■□ 3.19
HDAC10-219ENST00000497483 DEFB132Q7Z7B7 95 aa34.98■■■■□ 3.19
HDAC10-219ENST00000497483 TMC1Q8TDI8 760 aa34.98■■■■□ 3.19
HDAC10-219ENST00000497483 SLC12A5Q9H2X9 1139 aa34.98■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms