RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 ONECUT3O60422 494 aaPredicted RBP24.76■■□□□ 1.55
SMC4-226ENST00000497311 CCDC61Q9Y6R9 512 aa24.76■■□□□ 1.55
SMC4-226ENST00000497311 COL14A1Q05707 1796 aaKnown RBP24.74■■□□□ 1.55
SMC4-226ENST00000497311 BRWD3Q6RI45 1802 aa24.74■■□□□ 1.55
SMC4-226ENST00000497311 POLR3AO14802 1390 aaPredicted RBP24.72■■□□□ 1.55
SMC4-226ENST00000497311 ACEP12821 1306 aa24.72■■□□□ 1.55
SMC4-226ENST00000497311 CENPJQ9HC77 1338 aaPredicted RBP24.72■■□□□ 1.55
SMC4-226ENST00000497311 NBPF8Q3BBV2 869 aa24.72■■□□□ 1.55
SMC4-226ENST00000497311 L3MBTL2Q969R5 705 aa24.72■■□□□ 1.55
SMC4-226ENST00000497311 PLEKHG3A1L390 1219 aa24.71■■□□□ 1.55
SMC4-226ENST00000497311 PRDM11Q9NQV5 511 aa24.71■■□□□ 1.55
SMC4-226ENST00000497311 NRAPQ86VF7 1730 aa24.71■■□□□ 1.55
SMC4-226ENST00000497311 CRYBG1Q9Y4K1 1723 aa24.71■■□□□ 1.55
SMC4-226ENST00000497311 TOPAZ1Q8N9V7 1692 aa24.71■■□□□ 1.55
SMC4-226ENST00000497311 A0A0G2JS52 829 aa24.7■■□□□ 1.54
SMC4-226ENST00000497311 SRPK2P78362 688 aaKnown RBP24.7■■□□□ 1.54
SMC4-226ENST00000497311 MYT1Q01538 1121 aa24.7■■□□□ 1.54
SMC4-226ENST00000497311 KRT27Q7Z3Y8 459 aa24.7■■□□□ 1.54
SMC4-226ENST00000497311 BLMP54132 1417 aaPredicted RBP24.69■■□□□ 1.54
SMC4-226ENST00000497311 ZRANB1Q9UGI0 708 aa24.69■■□□□ 1.54
SMC4-226ENST00000497311 FAM98CQ17RN3 349 aaKnown RBP24.68■■□□□ 1.54
SMC4-226ENST00000497311 SIN3AQ96ST3 1273 aa24.68■■□□□ 1.54
SMC4-226ENST00000497311 NUTM2GQ5VZR2 741 aa24.67■■□□□ 1.54
SMC4-226ENST00000497311 SF3B2Q13435 895 aaKnown RBP24.66■■□□□ 1.54
SMC4-226ENST00000497311 KIAA0232Q92628 1395 aa24.66■■□□□ 1.54
SMC4-226ENST00000497311 NEUROD1Q13562 356 aa24.65■■□□□ 1.54
SMC4-226ENST00000497311 CABP2Q9NPB3 220 aa24.65■■□□□ 1.54
SMC4-226ENST00000497311 SPATA31A5Q5VU36 1347 aa24.64■■□□□ 1.54
SMC4-226ENST00000497311 SPATA31A7Q8IWB4 1347 aa24.64■■□□□ 1.54
SMC4-226ENST00000497311 PPIP5K1Q6PFW1 1433 aa24.64■■□□□ 1.54
SMC4-226ENST00000497311 ZC3H6P61129 1189 aaKnown RBP24.64■■□□□ 1.54
SMC4-226ENST00000497311 ABTB2Q8N961 1025 aa24.64■■□□□ 1.54
SMC4-226ENST00000497311 PHRF1Q9P1Y6 1649 aaKnown RBP24.64■■□□□ 1.53
SMC4-226ENST00000497311 CHRNA2Q15822 529 aa24.63■■□□□ 1.53
SMC4-226ENST00000497311 QRICH2Q9H0J4 1663 aa24.62■■□□□ 1.53
SMC4-226ENST00000497311 DEFB132Q7Z7B7 95 aa24.6■■□□□ 1.53
SMC4-226ENST00000497311 STRN4Q9NRL3 753 aa24.6■■□□□ 1.53
SMC4-226ENST00000497311 TRPM1Q7Z4N2 1603 aa24.58■■□□□ 1.53
SMC4-226ENST00000497311 NLRP13Q86W25 1043 aa24.58■■□□□ 1.53
SMC4-226ENST00000497311 CABP1Q9NZU7 370 aa24.58■■□□□ 1.53
SMC4-226ENST00000497311 BRD4O60885 1362 aaPredicted RBP24.57■■□□□ 1.52
SMC4-226ENST00000497311 ROCK2O75116 1388 aaKnown RBP24.57■■□□□ 1.52
SMC4-226ENST00000497311 USP19O94966 1318 aa24.57■■□□□ 1.52
SMC4-226ENST00000497311 SPATA31A1Q5TZJ5 1347 aa24.57■■□□□ 1.52
SMC4-226ENST00000497311 EVC2Q86UK5 1308 aa24.57■■□□□ 1.52
SMC4-226ENST00000497311 EVA1CP58658 441 aa24.56■■□□□ 1.52
SMC4-226ENST00000497311 NRKQ7Z2Y5 1582 aa24.54■■□□□ 1.52
SMC4-226ENST00000497311 CPDO75976 1380 aa24.54■■□□□ 1.52
SMC4-226ENST00000497311 SRCAPQ6ZRS2 3230 aa24.53■■□□□ 1.52
SMC4-226ENST00000497311 GCP02774 474 aa24.53■■□□□ 1.52
SMC4-226ENST00000497311 THSD7AQ9UPZ6 1657 aa24.53■■□□□ 1.52
SMC4-226ENST00000497311 BAG6P46379 1132 aa24.52■■□□□ 1.52
SMC4-226ENST00000497311 FAM182BQ5T319 152 aa24.52■■□□□ 1.52
SMC4-226ENST00000497311 USP6P35125 1406 aa24.52■■□□□ 1.52
SMC4-226ENST00000497311 USP35Q9P2H5 1018 aa24.51■■□□□ 1.51
SMC4-226ENST00000497311 SSH2Q76I76 1423 aa24.51■■□□□ 1.51
SMC4-226ENST00000497311 NLRP6P59044 892 aa24.5■■□□□ 1.51
SMC4-226ENST00000497311 CAMTA1Q9Y6Y1 1673 aa24.5■■□□□ 1.51
SMC4-226ENST00000497311 LARP1Q6PKG0 1096 aaKnown RBP24.48■■□□□ 1.51
SMC4-226ENST00000497311 BARGINQ6ZT62 677 aa24.47■■□□□ 1.51
SMC4-226ENST00000497311 LMO7Q8WWI1 1683 aa24.46■■□□□ 1.51
SMC4-226ENST00000497311 ZNF692Q9BU19 519 aaPredicted RBP24.46■■□□□ 1.51
SMC4-226ENST00000497311 RGPD1P0DJD0 1748 aa24.45■■□□□ 1.5
SMC4-226ENST00000497311 TCP11L2Q8N4U5 519 aa24.45■■□□□ 1.5
SMC4-226ENST00000497311 ZBTB7CA1YPR0 619 aa24.44■■□□□ 1.5
SMC4-226ENST00000497311 FAM196AQ6ZSG2 479 aa24.44■■□□□ 1.5
SMC4-226ENST00000497311 EN1Q05925 392 aaPredicted RBP24.43■■□□□ 1.5
SMC4-226ENST00000497311 THRAP3Q9Y2W1 955 aaKnown RBP24.43■■□□□ 1.5
SMC4-226ENST00000497311 PDE3BQ13370 1112 aa24.42■■□□□ 1.5
SMC4-226ENST00000497311 SLIT3O75094 1523 aa24.41■■□□□ 1.5
SMC4-226ENST00000497311 COL5A2P05997 1499 aaPredicted RBP24.41■■□□□ 1.5
SMC4-226ENST00000497311 CARD11Q9BXL7 1154 aa24.41■■□□□ 1.5
SMC4-226ENST00000497311 TTC21BQ7Z4L5 1316 aa24.4■■□□□ 1.5
SMC4-226ENST00000497311 AATKQ6ZMQ8 1374 aa24.4■■□□□ 1.5
SMC4-226ENST00000497311 TONSLQ96HA7 1378 aa24.4■■□□□ 1.5
SMC4-226ENST00000497311 PIK3C2AO00443 1686 aa24.4■■□□□ 1.5
SMC4-226ENST00000497311 TRIM37O94972 964 aa24.38■■□□□ 1.49
SMC4-226ENST00000497311 SBNO2Q9Y2G9 1366 aa24.38■■□□□ 1.49
SMC4-226ENST00000497311 TTC21AQ8NDW8 1320 aa24.37■■□□□ 1.49
SMC4-226ENST00000497311 DISP2A7MBM2 1401 aa24.37■■□□□ 1.49
SMC4-226ENST00000497311 CRB1P82279 1406 aa24.37■■□□□ 1.49
SMC4-226ENST00000497311 AKAP12Q02952 1782 aa24.37■■□□□ 1.49
SMC4-226ENST00000497311 KCNH5Q8NCM2 988 aa24.37■■□□□ 1.49
SMC4-226ENST00000497311 CPSF1Q10570 1443 aaKnown RBP24.36■■□□□ 1.49
SMC4-226ENST00000497311 TNS1Q9HBL0 1735 aaKnown RBP24.36■■□□□ 1.49
SMC4-226ENST00000497311 KTN1Q86UP2 1357 aaKnown RBP24.36■■□□□ 1.49
SMC4-226ENST00000497311 PSDA5PKW4 1024 aaPredicted RBP24.34■■□□□ 1.49
SMC4-226ENST00000497311 EZH2Q15910 746 aaKnown RBP24.34■■□□□ 1.49
SMC4-226ENST00000497311 APBA3O96018 575 aa24.33■■□□□ 1.49
SMC4-226ENST00000497311 TOM1L2Q6ZVM7 507 aa24.33■■□□□ 1.49
SMC4-226ENST00000497311 ARHGEF25Q86VW2 580 aa24.33■■□□□ 1.49
SMC4-226ENST00000497311 SOX12O15370 315 aa24.32■■□□□ 1.48
SMC4-226ENST00000497311 CAMKK2Q96RR4 588 aa24.32■■□□□ 1.48
SMC4-226ENST00000497311 AXIN2Q9Y2T1 843 aa24.32■■□□□ 1.48
SMC4-226ENST00000497311 COL18A1P39060 1754 aa24.31■■□□□ 1.48
SMC4-226ENST00000497311 PARP4Q9UKK3 1724 aaKnown RBP24.3■■□□□ 1.48
SMC4-226ENST00000497311 C11orf95C9JLR9 678 aaPredicted RBP24.29■■□□□ 1.48
SMC4-226ENST00000497311 TMC1Q8TDI8 760 aa24.29■■□□□ 1.48
SMC4-226ENST00000497311 WDR17Q8IZU2 1322 aa24.29■■□□□ 1.48
SMC4-226ENST00000497311 TRIM26Q12899 539 aaPredicted RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms