RNA–Protein interactions for RNA: ENST00000497163.1

CPS1-209, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-209ENST00000497163 KLF16Q9BXK1 252 aaPredicted RBP8.57□□□□□ -1.04
CPS1-209ENST00000497163 ERBB4Q15303 1308 aa8.56□□□□□ -1.04
CPS1-209ENST00000497163 GJA5P36382 358 aa8.56□□□□□ -1.04
CPS1-209ENST00000497163 VEGFBP49765 207 aa8.56□□□□□ -1.04
CPS1-209ENST00000497163 NNTQ13423 1086 aa8.56□□□□□ -1.04
CPS1-209ENST00000497163 TIMP2P16035 220 aa8.55□□□□□ -1.04
CPS1-209ENST00000497163 LYPD8Q6UX82 237 aa8.55□□□□□ -1.04
CPS1-209ENST00000497163 ZSCAN1Q8NBB4 408 aa8.55□□□□□ -1.04
CPS1-209ENST00000497163 FAM181BA6NEQ2 426 aa8.54□□□□□ -1.04
CPS1-209ENST00000497163 ZMYND10O75800 440 aa8.54□□□□□ -1.04
CPS1-209ENST00000497163 MRPL14Q6P1L8 145 aaKnown RBP8.54□□□□□ -1.04
CPS1-209ENST00000497163 GIGYF2Q6Y7W6 1299 aaKnown RBP8.54□□□□□ -1.04
CPS1-209ENST00000497163 TTLL12Q14166 644 aaPredicted RBP8.53□□□□□ -1.04
CPS1-209ENST00000497163 CDK15Q96Q40 435 aa8.53□□□□□ -1.04
CPS1-209ENST00000497163 BEGAINQ9BUH8 593 aa8.53□□□□□ -1.04
CPS1-209ENST00000497163 ADH1CP00326 375 aa8.52□□□□□ -1.05
CPS1-209ENST00000497163 RSBN1LQ6PCB5 846 aaPredicted RBP8.52□□□□□ -1.05
CPS1-209ENST00000497163 PCDHB15Q9Y5E8 787 aa8.52□□□□□ -1.05
CPS1-209ENST00000497163 CFAP99D6REC4 459 aa8.51□□□□□ -1.05
CPS1-209ENST00000497163 F12P00748 615 aaPredicted RBP8.51□□□□□ -1.05
CPS1-209ENST00000497163 WDR4P57081 412 aaKnown RBP8.51□□□□□ -1.05
CPS1-209ENST00000497163 TBC1D2Q9BYX2 928 aa8.51□□□□□ -1.05
CPS1-209ENST00000497163 SCARF1Q14162 830 aa8.5□□□□□ -1.05
CPS1-209ENST00000497163 FAM174AQ8TBP5 190 aa8.5□□□□□ -1.05
CPS1-209ENST00000497163 PURBQ96QR8 312 aaKnown RBP8.5□□□□□ -1.05
CPS1-209ENST00000497163 SPTLC1O15269 473 aa8.49□□□□□ -1.05
CPS1-209ENST00000497163 VSIG8P0DPA2 414 aa8.49□□□□□ -1.05
CPS1-209ENST00000497163 CTHP32929 405 aa8.49□□□□□ -1.05
CPS1-209ENST00000497163 DIXDC1Q155Q3 683 aa8.49□□□□□ -1.05
CPS1-209ENST00000497163 FOXJ1Q92949 421 aa8.49□□□□□ -1.05
CPS1-209ENST00000497163 HRCP23327 699 aa8.48□□□□□ -1.05
CPS1-209ENST00000497163 ZC3H15Q8WU90 426 aaKnown RBP8.48□□□□□ -1.05
CPS1-209ENST00000497163 MAP10Q9P2G4 905 aa8.48□□□□□ -1.05
CPS1-209ENST00000497163 SOBPA7XYQ1 873 aa8.47□□□□□ -1.05
CPS1-209ENST00000497163 C4orf48Q5BLP8 95 aa8.47□□□□□ -1.05
CPS1-209ENST00000497163 NR3C2P08235 984 aa8.46□□□□□ -1.06
CPS1-209ENST00000497163 GRM5P41594 1212 aa8.46□□□□□ -1.06
CPS1-209ENST00000497163 PRPF38BQ5VTL8 546 aaKnown RBP8.46□□□□□ -1.06
CPS1-209ENST00000497163 PARP9Q8IXQ6 854 aa8.46□□□□□ -1.06
CPS1-209ENST00000497163 ZBTB3Q9H5J0 574 aa8.46□□□□□ -1.06
CPS1-209ENST00000497163 NR5A1Q13285 461 aa8.45□□□□□ -1.06
CPS1-209ENST00000497163 ITPKCQ96DU7 683 aa8.45□□□□□ -1.06
CPS1-209ENST00000497163 ZFAND3Q9H8U3 227 aa8.45□□□□□ -1.06
CPS1-209ENST00000497163 ZIC2O95409 532 aaPredicted RBP8.44□□□□□ -1.06
CPS1-209ENST00000497163 TRIM66O15016 1216 aa8.43□□□□□ -1.06
CPS1-209ENST00000497163 PER1O15534 1290 aaPredicted RBP8.43□□□□□ -1.06
CPS1-209ENST00000497163 ARID5BQ14865 1188 aa8.43□□□□□ -1.06
CPS1-209ENST00000497163 RIC3Q7Z5B4 369 aa8.43□□□□□ -1.06
CPS1-209ENST00000497163 CABLES1Q8TDN4 633 aa8.43□□□□□ -1.06
CPS1-209ENST00000497163 BPHLQ86WA6 291 aaPredicted RBP8.42□□□□□ -1.06
CPS1-209ENST00000497163 SH3RF1Q7Z6J0 888 aa8.41□□□□□ -1.06
CPS1-209ENST00000497163 C1QTNF2Q9BXJ5 285 aa8.41□□□□□ -1.06
CPS1-209ENST00000497163 MAN1A2O60476 641 aa8.4□□□□□ -1.06
CPS1-209ENST00000497163 TUSC1Q2TAM9 212 aa8.4□□□□□ -1.06
CPS1-209ENST00000497163 C6orf118Q5T5N4 469 aa8.4□□□□□ -1.06
CPS1-209ENST00000497163 MEIOBQ8N635 442 aa8.4□□□□□ -1.06
CPS1-209ENST00000497163 PPFIA3O75145 1194 aa8.39□□□□□ -1.07
CPS1-209ENST00000497163 AGERQ15109 404 aa8.39□□□□□ -1.07
CPS1-209ENST00000497163 LINC00528Q8N1L1 170 aa8.39□□□□□ -1.07
CPS1-209ENST00000497163 LIMD1Q9UGP4 676 aa8.39□□□□□ -1.07
CPS1-209ENST00000497163 SOS2Q07890 1332 aaPredicted RBP8.38□□□□□ -1.07
CPS1-209ENST00000497163 LILRB3O75022 631 aa8.38□□□□□ -1.07
CPS1-209ENST00000497163 MAP4K5Q9Y4K4 846 aa8.38□□□□□ -1.07
CPS1-209ENST00000497163 QPCTQ16769 361 aa8.37□□□□□ -1.07
CPS1-209ENST00000497163 MYSM1Q5VVJ2 828 aa8.37□□□□□ -1.07
CPS1-209ENST00000497163 SH3BP5LQ7L8J4 393 aa8.37□□□□□ -1.07
CPS1-209ENST00000497163 TRMT44Q8IYL2 757 aaKnown RBP8.37□□□□□ -1.07
CPS1-209ENST00000497163 ARMC2Q8NEN0 867 aa8.37□□□□□ -1.07
CPS1-209ENST00000497163 DNMT3LQ9UJW3 386 aa8.37□□□□□ -1.07
CPS1-209ENST00000497163 LOC100996750A0A140TA64 210 aa8.36□□□□□ -1.07
CPS1-209ENST00000497163 BMP2P12643 396 aa8.36□□□□□ -1.07
CPS1-209ENST00000497163 CSPP1Q1MSJ5 1256 aa8.36□□□□□ -1.07
CPS1-209ENST00000497163 AK7Q96M32 723 aa8.36□□□□□ -1.07
CPS1-209ENST00000497163 KRTAP4-6Q9BYQ5 205 aa8.36□□□□□ -1.07
CPS1-209ENST00000497163 UPP2O95045 317 aa8.35□□□□□ -1.07
CPS1-209ENST00000497163 GSK3AP49840 483 aa8.35□□□□□ -1.07
CPS1-209ENST00000497163 FSHRP23945 695 aa8.34□□□□□ -1.07
CPS1-209ENST00000497163 KCNMA1Q12791 1236 aa8.33□□□□□ -1.08
CPS1-209ENST00000497163 NBPF14Q5TI25 921 aa8.33□□□□□ -1.08
CPS1-209ENST00000497163 VASH1Q7L8A9 365 aaPredicted RBP8.33□□□□□ -1.08
CPS1-209ENST00000497163 TSEN34Q9BSV6 310 aaKnown RBP8.33□□□□□ -1.08
CPS1-209ENST00000497163 EMILIN1Q9Y6C2 1016 aa8.33□□□□□ -1.08
CPS1-209ENST00000497163 NUTM2BA6NNL0 878 aaPredicted RBP8.32□□□□□ -1.08
CPS1-209ENST00000497163 NUTM2EB1AL46 878 aaPredicted RBP8.32□□□□□ -1.08
CPS1-209ENST00000497163 KRT76Q01546 638 aa8.32□□□□□ -1.08
CPS1-209ENST00000497163 RTL5Q5HYW3 569 aaPredicted RBP8.32□□□□□ -1.08
CPS1-209ENST00000497163 NUTM2DQ5VT03 806 aaPredicted RBP8.32□□□□□ -1.08
CPS1-209ENST00000497163 NUTM2AQ8IVF1 878 aaPredicted RBP8.32□□□□□ -1.08
CPS1-209ENST00000497163 CCDC116Q8IYX3 515 aa8.32□□□□□ -1.08
CPS1-209ENST00000497163 TSC1Q92574 1164 aa8.32□□□□□ -1.08
CPS1-209ENST00000497163 GPR161Q8N6U8 529 aaKnown RBP8.31□□□□□ -1.08
CPS1-209ENST00000497163 GPKOWQ92917 476 aaPredicted RBP eCLIP8.31□□□□□ -1.08
CPS1-209ENST00000497163 PDE4DQ08499 809 aa8.3□□□□□ -1.08
CPS1-209ENST00000497163 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.3□□□□□ -1.08
CPS1-209ENST00000497163 HELBQ8NG08 1087 aaPredicted RBP8.3□□□□□ -1.08
CPS1-209ENST00000497163 MAGEB6P1A0A0J9YX57 407 aa8.29□□□□□ -1.08
CPS1-209ENST00000497163 ERFEQ4G0M1 354 aa8.29□□□□□ -1.08
CPS1-209ENST00000497163 Q6ZVU0 165 aa8.29□□□□□ -1.08
CPS1-209ENST00000497163 TTLL8A6PVC2 850 aa8.28□□□□□ -1.08
CPS1-209ENST00000497163 PTSQ03393 145 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms