RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 SCNN1AP37088 669 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 PTK7Q13308 1070 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 COL19A1Q14993 1142 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 ZNF326Q5BKZ1 582 aaKnown RBP2.8□□□□□ -1.96
UBR4-217ENST00000497018 NUTM1Q86Y26 1132 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 CERS3Q8IU89 383 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 FAM174AQ8TBP5 190 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 RBM46Q8TBY0 533 aaKnown RBP2.8□□□□□ -1.96
UBR4-217ENST00000497018 PIK3R5Q8WYR1 880 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 JPH4Q96JJ6 628 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 ASB16Q96NS5 453 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 EYA1Q99502 592 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 POLR3GLQ9BT43 218 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 EGFL7Q9UHF1 273 aa2.8□□□□□ -1.96
UBR4-217ENST00000497018 NUTM2BA6NNL0 878 aaPredicted RBP2.79□□□□□ -1.96
UBR4-217ENST00000497018 NUTM2EB1AL46 878 aaPredicted RBP2.79□□□□□ -1.96
UBR4-217ENST00000497018 CFAP99D6REC4 459 aa2.79□□□□□ -1.96
UBR4-217ENST00000497018 C3orf80F5H4A9 247 aa2.79□□□□□ -1.96
UBR4-217ENST00000497018 ERCC5P28715 1186 aaPredicted RBP2.79□□□□□ -1.96
UBR4-217ENST00000497018 FOSBP53539 338 aa2.79□□□□□ -1.96
UBR4-217ENST00000497018 PRSS12P56730 875 aa2.79□□□□□ -1.96
UBR4-217ENST00000497018 SEMA3FQ13275 785 aa2.79□□□□□ -1.96
UBR4-217ENST00000497018 C6orf132Q5T0Z8 1188 aa2.79□□□□□ -1.96
UBR4-217ENST00000497018 NUTM2DQ5VT03 806 aaPredicted RBP2.79□□□□□ -1.96
UBR4-217ENST00000497018 CC2D2BQ6DHV5 1058 aa2.79□□□□□ -1.96
UBR4-217ENST00000497018 NOP9Q86U38 636 aaKnown RBP2.79□□□□□ -1.96
UBR4-217ENST00000497018 METTL16Q86W50 562 aaKnown RBP2.79□□□□□ -1.96
UBR4-217ENST00000497018 NUTM2AQ8IVF1 878 aaPredicted RBP2.79□□□□□ -1.96
UBR4-217ENST00000497018 SULF1Q8IWU6 871 aa2.79□□□□□ -1.96
UBR4-217ENST00000497018 GPATCH3Q96I76 525 aa2.79□□□□□ -1.96
UBR4-217ENST00000497018 LNPKQ9C0E8 428 aa2.79□□□□□ -1.96
UBR4-217ENST00000497018 TMEM134Q9H6X4 195 aa2.79□□□□□ -1.96
UBR4-217ENST00000497018 CUEDC1Q9NWM3 386 aaPredicted RBP2.79□□□□□ -1.96
UBR4-217ENST00000497018 TBX22Q9Y458 520 aa2.79□□□□□ -1.96
UBR4-217ENST00000497018 DDX11L8A8MPP1 907 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 LZTS3O60299 673 aaPredicted RBP2.78□□□□□ -1.96
UBR4-217ENST00000497018 ICMTO60725 284 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 KDM4AO75164 1064 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 DKK1O94907 266 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 FDX1P10109 184 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 USP46P62068 366 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 GUCA2AQ02747 115 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 NR1H3Q13133 447 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 OCLNQ16625 522 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 SWI5Q1ZZU3 235 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 TSNAXIP1Q2TAA8 658 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 ASTLQ6HA08 431 aaPredicted RBP2.78□□□□□ -1.96
UBR4-217ENST00000497018 TAS1R3Q7RTX0 852 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 RNF135Q8IUD6 432 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 SLF2Q8IX21 1173 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 NLGN1Q8N2Q7 840 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 LARGE2Q8N3Y3 721 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 HELBQ8NG08 1087 aaPredicted RBP2.78□□□□□ -1.96
UBR4-217ENST00000497018 UBE2Q2Q8WVN8 375 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 HLA-CQ95604 372 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 CDCA7Q9BWT1 371 aaPredicted RBP2.78□□□□□ -1.96
UBR4-217ENST00000497018 BACH2Q9BYV9 841 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 BIN2Q9UBW5 565 aaPredicted RBP2.78□□□□□ -1.96
UBR4-217ENST00000497018 LAMC3Q9Y6N6 1575 aa2.78□□□□□ -1.96
UBR4-217ENST00000497018 RSF1Q96T23 1441 aaPredicted RBP2.77□□□□□ -1.97
UBR4-217ENST00000497018 CHD1O14646 1710 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 H3BRB1 525 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 HAX1O00165 279 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 SCAMP3O14828 347 aaKnown RBP2.77□□□□□ -1.97
UBR4-217ENST00000497018 ATMINO43313 823 aaPredicted RBP2.77□□□□□ -1.97
UBR4-217ENST00000497018 GALR2O43603 387 aaPredicted RBP2.77□□□□□ -1.97
UBR4-217ENST00000497018 MARCH6O60337 910 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 FBXO45P0C2W1 286 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 ATN1P54259 1190 aaPredicted RBP2.77□□□□□ -1.97
UBR4-217ENST00000497018 EIF4G2P78344 907 aaKnown RBP eCLIP2.77□□□□□ -1.97
UBR4-217ENST00000497018 ARHGAP4P98171 946 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 ZNF211Q13398 564 aaPredicted RBP2.77□□□□□ -1.97
UBR4-217ENST00000497018 MTMR2Q13614 643 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 NR6A1Q15406 480 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 EGFLAMQ63HQ2 1017 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 ANKMY2Q8IV38 441 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 RGL4Q8IZJ4 473 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 SLC43A3Q8NBI5 491 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 MICAL1Q8TDZ2 1067 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 ARMC5Q96C12 935 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 CDCA7LQ96GN5 454 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 DCBLD2Q96PD2 775 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 DNAJC2Q99543 621 aaKnown RBP2.77□□□□□ -1.97
UBR4-217ENST00000497018 PIF1Q9H611 641 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 TUT1Q9H6E5 874 aaKnown RBP2.77□□□□□ -1.97
UBR4-217ENST00000497018 PPP1R1BQ9UD71 204 aaPredicted RBP2.77□□□□□ -1.97
UBR4-217ENST00000497018 DCTN4Q9UJW0 460 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 CHIC2Q9UKJ5 165 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 BRPF3Q9ULD4 1205 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 SUGT1Q9Y2Z0 365 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 WDR62O43379 1518 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 MRC2Q9UBG0 1479 aa2.77□□□□□ -1.97
UBR4-217ENST00000497018 TLDC2A0PJX2 215 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 PER1O15534 1290 aaPredicted RBP2.76□□□□□ -1.97
UBR4-217ENST00000497018 C21orf2O43822 256 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 RAB11FIP3O75154 756 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 SKIP12755 728 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 DNAJB2P25686 324 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 GCGRP47871 477 aa2.76□□□□□ -1.97
UBR4-217ENST00000497018 PSME1Q06323 249 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms