RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 FNBP4Q8N3X1 1017 aaPredicted RBP11.27□□□□□ -0.61
SRRM1-220ENST00000496882 NGDNQ8NEJ9 315 aaKnown RBP11.27□□□□□ -0.61
SRRM1-220ENST00000496882 SBNO1A3KN83 1393 aa11.27□□□□□ -0.61
SRRM1-220ENST00000496882 TULP4Q9NRJ4 1543 aa11.26□□□□□ -0.61
SRRM1-220ENST00000496882 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
SRRM1-220ENST00000496882 KIAA1210Q9ULL0 1709 aa11.25□□□□□ -0.61
SRRM1-220ENST00000496882 RGPD8O14715 1765 aaPredicted RBP11.25□□□□□ -0.61
SRRM1-220ENST00000496882 ARHGEF28Q8N1W1 1705 aaKnown RBP11.24□□□□□ -0.61
SRRM1-220ENST00000496882 PAK3O75914 559 aaPredicted RBP11.24□□□□□ -0.61
SRRM1-220ENST00000496882 NEUROD1Q13562 356 aa11.24□□□□□ -0.61
SRRM1-220ENST00000496882 RGS12O14924 1447 aa11.24□□□□□ -0.61
SRRM1-220ENST00000496882 KLHL34Q8N239 644 aa11.23□□□□□ -0.61
SRRM1-220ENST00000496882 UPF1Q92900 1129 aaKnown RBP eCLIP11.23□□□□□ -0.61
SRRM1-220ENST00000496882 NUDT16Q96DE0 195 aaKnown RBP11.23□□□□□ -0.61
SRRM1-220ENST00000496882 CDK19Q9BWU1 502 aa11.23□□□□□ -0.61
SRRM1-220ENST00000496882 ATRNO75882 1429 aa11.23□□□□□ -0.61
SRRM1-220ENST00000496882 USP32Q8NFA0 1604 aa11.23□□□□□ -0.61
SRRM1-220ENST00000496882 NBPF1Q3BBV0 1214 aa11.22□□□□□ -0.61
SRRM1-220ENST00000496882 UNC5CLQ8IV45 518 aa11.22□□□□□ -0.61
SRRM1-220ENST00000496882 CABLES1Q8TDN4 633 aa11.22□□□□□ -0.61
SRRM1-220ENST00000496882 L3MBTL2Q969R5 705 aa11.22□□□□□ -0.61
SRRM1-220ENST00000496882 PRR36Q9H6K5 1346 aa11.22□□□□□ -0.61
SRRM1-220ENST00000496882 CENPJQ9HC77 1338 aaPredicted RBP11.22□□□□□ -0.61
SRRM1-220ENST00000496882 MARF1Q9Y4F3 1742 aaKnown RBP11.22□□□□□ -0.61
SRRM1-220ENST00000496882 ITSN1Q15811 1721 aa11.21□□□□□ -0.61
SRRM1-220ENST00000496882 ATAD2Q6PL18 1390 aa11.21□□□□□ -0.61
SRRM1-220ENST00000496882 SRPK2P78362 688 aaKnown RBP11.21□□□□□ -0.61
SRRM1-220ENST00000496882 SPOCK2Q92563 424 aa11.21□□□□□ -0.61
SRRM1-220ENST00000496882 GJD4Q96KN9 370 aaPredicted RBP11.21□□□□□ -0.61
SRRM1-220ENST00000496882 SIN3AQ96ST3 1273 aa11.21□□□□□ -0.61
SRRM1-220ENST00000496882 CCDC9Q9Y3X0 531 aaKnown RBP11.21□□□□□ -0.61
SRRM1-220ENST00000496882 BCL9LQ86UU0 1499 aa11.2□□□□□ -0.62
SRRM1-220ENST00000496882 CCDC61Q9Y6R9 512 aa11.2□□□□□ -0.62
SRRM1-220ENST00000496882 ATP7BP35670 1465 aa11.19□□□□□ -0.62
SRRM1-220ENST00000496882 ROCK2O75116 1388 aaKnown RBP11.19□□□□□ -0.62
SRRM1-220ENST00000496882 SLIT2O94813 1529 aa11.19□□□□□ -0.62
SRRM1-220ENST00000496882 TRIM26Q12899 539 aaPredicted RBP11.18□□□□□ -0.62
SRRM1-220ENST00000496882 ZNF692Q9BU19 519 aaPredicted RBP11.18□□□□□ -0.62
SRRM1-220ENST00000496882 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.18□□□□□ -0.62
SRRM1-220ENST00000496882 ACEP12821 1306 aa11.17□□□□□ -0.62
SRRM1-220ENST00000496882 A0A0G2JS52 829 aa11.17□□□□□ -0.62
SRRM1-220ENST00000496882 MYT1Q01538 1121 aa11.17□□□□□ -0.62
SRRM1-220ENST00000496882 VPS72Q15906 364 aa11.17□□□□□ -0.62
SRRM1-220ENST00000496882 TRPM3Q9HCF6 1732 aaPredicted RBP11.17□□□□□ -0.62
SRRM1-220ENST00000496882 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
SRRM1-220ENST00000496882 EVC2Q86UK5 1308 aa11.16□□□□□ -0.62
SRRM1-220ENST00000496882 PRDM11Q9NQV5 511 aa11.16□□□□□ -0.62
SRRM1-220ENST00000496882 RALGAPBQ86X10 1494 aa11.16□□□□□ -0.62
SRRM1-220ENST00000496882 POLR3AO14802 1390 aaPredicted RBP11.16□□□□□ -0.62
SRRM1-220ENST00000496882 ABCA3Q99758 1704 aa11.15□□□□□ -0.62
SRRM1-220ENST00000496882 ALS2Q96Q42 1657 aa11.15□□□□□ -0.62
SRRM1-220ENST00000496882 PLEKHG3A1L390 1219 aa11.15□□□□□ -0.62
SRRM1-220ENST00000496882 FAM83GA6ND36 823 aa11.15□□□□□ -0.62
SRRM1-220ENST00000496882 NBPF8Q3BBV2 869 aa11.15□□□□□ -0.62
SRRM1-220ENST00000496882 CABP2Q9NPB3 220 aa11.15□□□□□ -0.62
SRRM1-220ENST00000496882 BTG4Q9NY30 223 aa11.15□□□□□ -0.62
SRRM1-220ENST00000496882 PPIP5K1Q6PFW1 1433 aa11.15□□□□□ -0.62
SRRM1-220ENST00000496882 NWD2Q9ULI1 1742 aa11.15□□□□□ -0.63
SRRM1-220ENST00000496882 PLCH1Q4KWH8 1693 aa11.14□□□□□ -0.63
SRRM1-220ENST00000496882 QRICH2Q9H0J4 1663 aa11.14□□□□□ -0.63
SRRM1-220ENST00000496882 TRPM1Q7Z4N2 1603 aa11.14□□□□□ -0.63
SRRM1-220ENST00000496882 ECM2O94769 699 aaPredicted RBP11.14□□□□□ -0.63
SRRM1-220ENST00000496882 ABTB2Q8N961 1025 aa11.14□□□□□ -0.63
SRRM1-220ENST00000496882 COL14A1Q05707 1796 aaKnown RBP11.13□□□□□ -0.63
SRRM1-220ENST00000496882 SF3B2Q13435 895 aaKnown RBP11.13□□□□□ -0.63
SRRM1-220ENST00000496882 NUTM2GQ5VZR2 741 aa11.13□□□□□ -0.63
SRRM1-220ENST00000496882 NLRP13Q86W25 1043 aa11.13□□□□□ -0.63
SRRM1-220ENST00000496882 CCDC125Q86Z20 511 aa11.13□□□□□ -0.63
SRRM1-220ENST00000496882 VSIG10Q8N0Z9 540 aa11.13□□□□□ -0.63
SRRM1-220ENST00000496882 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.13□□□□□ -0.63
SRRM1-220ENST00000496882 TOPAZ1Q8N9V7 1692 aa11.13□□□□□ -0.63
SRRM1-220ENST00000496882 BRD4O60885 1362 aaPredicted RBP11.13□□□□□ -0.63
SRRM1-220ENST00000496882 GLI3P10071 1580 aa11.12□□□□□ -0.63
SRRM1-220ENST00000496882 SEPT12Q8IYM1 358 aa11.12□□□□□ -0.63
SRRM1-220ENST00000496882 PLCD3Q8N3E9 789 aa11.12□□□□□ -0.63
SRRM1-220ENST00000496882 CARD11Q9BXL7 1154 aa11.12□□□□□ -0.63
SRRM1-220ENST00000496882 SPDYE2BA6NHP3 402 aa11.11□□□□□ -0.63
SRRM1-220ENST00000496882 SPDYE6P0CI01 402 aa11.11□□□□□ -0.63
SRRM1-220ENST00000496882 ZC3H6P61129 1189 aaKnown RBP11.11□□□□□ -0.63
SRRM1-220ENST00000496882 SPDYE2Q495Y8 402 aa11.11□□□□□ -0.63
SRRM1-220ENST00000496882 CABP1Q9NZU7 370 aa11.11□□□□□ -0.63
SRRM1-220ENST00000496882 KIAA0232Q92628 1395 aa11.11□□□□□ -0.63
SRRM1-220ENST00000496882 EVA1CP58658 441 aa11.1□□□□□ -0.63
SRRM1-220ENST00000496882 FAM98CQ17RN3 349 aaKnown RBP11.1□□□□□ -0.63
SRRM1-220ENST00000496882 KRT27Q7Z3Y8 459 aa11.1□□□□□ -0.63
SRRM1-220ENST00000496882 BBXQ8WY36 941 aaPredicted RBP11.1□□□□□ -0.63
SRRM1-220ENST00000496882 STRN4Q9NRL3 753 aa11.1□□□□□ -0.63
SRRM1-220ENST00000496882 CHRNA2Q15822 529 aa11.09□□□□□ -0.63
SRRM1-220ENST00000496882 PHRF1Q9P1Y6 1649 aaKnown RBP11.09□□□□□ -0.63
SRRM1-220ENST00000496882 ZBTB7CA1YPR0 619 aa11.08□□□□□ -0.64
SRRM1-220ENST00000496882 ONECUT3O60422 494 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-220ENST00000496882 NLRP6P59044 892 aa11.08□□□□□ -0.64
SRRM1-220ENST00000496882 NRAPQ86VF7 1730 aa11.08□□□□□ -0.64
SRRM1-220ENST00000496882 USP6P35125 1406 aa11.08□□□□□ -0.64
SRRM1-220ENST00000496882 BLMP54132 1417 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-220ENST00000496882 USP19O94966 1318 aa11.08□□□□□ -0.64
SRRM1-220ENST00000496882 SPATA31A5Q5VU36 1347 aa11.08□□□□□ -0.64
SRRM1-220ENST00000496882 SPATA31A7Q8IWB4 1347 aa11.08□□□□□ -0.64
SRRM1-220ENST00000496882 CRYBG1Q9Y4K1 1723 aa11.07□□□□□ -0.64
SRRM1-220ENST00000496882 SBNO2Q9Y2G9 1366 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms