RNA–Protein interactions for RNA: ENST00000496498.1

NPDC1-206, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 383 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-206ENST00000496498 AKAP12Q02952 1782 aa25.38■■□□□ 1.65
NPDC1-206ENST00000496498 AFF2P51816 1311 aa25.37■■□□□ 1.65
NPDC1-206ENST00000496498 USP6P35125 1406 aa25.37■■□□□ 1.65
NPDC1-206ENST00000496498 HAP1P54257 671 aaPredicted RBP25.36■■□□□ 1.65
NPDC1-206ENST00000496498 NGLY1Q96IV0 654 aa25.36■■□□□ 1.65
NPDC1-206ENST00000496498 CRYBG1Q9Y4K1 1723 aa25.36■■□□□ 1.65
NPDC1-206ENST00000496498 ZNF692Q9BU19 519 aaPredicted RBP25.35■■□□□ 1.65
NPDC1-206ENST00000496498 NINLQ9Y2I6 1382 aa25.34■■□□□ 1.65
NPDC1-206ENST00000496498 POTEAQ6S8J7 498 aa25.33■■□□□ 1.65
NPDC1-206ENST00000496498 FNBP4Q8N3X1 1017 aaPredicted RBP25.33■■□□□ 1.65
NPDC1-206ENST00000496498 CPSF1Q10570 1443 aaKnown RBP25.32■■□□□ 1.64
NPDC1-206ENST00000496498 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.32■■□□□ 1.64
NPDC1-206ENST00000496498 PHRF1Q9P1Y6 1649 aaKnown RBP25.31■■□□□ 1.64
NPDC1-206ENST00000496498 TMF1P82094 1093 aa25.31■■□□□ 1.64
NPDC1-206ENST00000496498 MON2Q7Z3U7 1717 aa25.31■■□□□ 1.64
NPDC1-206ENST00000496498 CDCA8Q53HL2 280 aa25.3■■□□□ 1.64
NPDC1-206ENST00000496498 NRKQ7Z2Y5 1582 aa25.3■■□□□ 1.64
NPDC1-206ENST00000496498 SSH2Q76I76 1423 aa25.29■■□□□ 1.64
NPDC1-206ENST00000496498 NWD2Q9ULI1 1742 aa25.29■■□□□ 1.64
NPDC1-206ENST00000496498 CABLES1Q8TDN4 633 aa25.29■■□□□ 1.64
NPDC1-206ENST00000496498 ABTB2Q8N961 1025 aa25.28■■□□□ 1.64
NPDC1-206ENST00000496498 USP21Q9UK80 565 aa25.28■■□□□ 1.64
NPDC1-206ENST00000496498 SLIT2O94813 1529 aa25.27■■□□□ 1.64
NPDC1-206ENST00000496498 PLCH1Q4KWH8 1693 aa25.26■■□□□ 1.63
NPDC1-206ENST00000496498 COL14A1Q05707 1796 aaKnown RBP25.26■■□□□ 1.63
NPDC1-206ENST00000496498 NLRP13Q86W25 1043 aa25.26■■□□□ 1.63
NPDC1-206ENST00000496498 TTC21AQ8NDW8 1320 aa25.26■■□□□ 1.63
NPDC1-206ENST00000496498 KTN1Q86UP2 1357 aaKnown RBP25.26■■□□□ 1.63
NPDC1-206ENST00000496498 HDGFL2Q7Z4V5 671 aaPredicted RBP25.25■■□□□ 1.63
NPDC1-206ENST00000496498 TERF2IPQ9NYB0 399 aa25.25■■□□□ 1.63
NPDC1-206ENST00000496498 TRPC5Q9UL62 973 aaPredicted RBP25.25■■□□□ 1.63
NPDC1-206ENST00000496498 CDK12Q9NYV4 1490 aaPredicted RBP25.25■■□□□ 1.63
NPDC1-206ENST00000496498 PIK3C2AO00443 1686 aa25.24■■□□□ 1.63
NPDC1-206ENST00000496498 BCL9LQ86UU0 1499 aa25.24■■□□□ 1.63
NPDC1-206ENST00000496498 CD163L1Q9NR16 1453 aa25.24■■□□□ 1.63
NPDC1-206ENST00000496498 USP19O94966 1318 aa25.24■■□□□ 1.63
NPDC1-206ENST00000496498 TMC1Q8TDI8 760 aa25.24■■□□□ 1.63
NPDC1-206ENST00000496498 RXRBP28702 533 aa25.23■■□□□ 1.63
NPDC1-206ENST00000496498 EIF4G2P78344 907 aaKnown RBP eCLIP25.23■■□□□ 1.63
NPDC1-206ENST00000496498 QTRT2Q9H974 415 aaKnown RBP25.23■■□□□ 1.63
NPDC1-206ENST00000496498 ATRNO75882 1429 aa25.22■■□□□ 1.63
NPDC1-206ENST00000496498 TTC21BQ7Z4L5 1316 aa25.22■■□□□ 1.63
NPDC1-206ENST00000496498 SOCS7O14512 581 aa25.21■■□□□ 1.63
NPDC1-206ENST00000496498 PLEKHG5O94827 1062 aa25.21■■□□□ 1.63
NPDC1-206ENST00000496498 EDC4Q6P2E9 1401 aaKnown RBP25.2■■□□□ 1.63
NPDC1-206ENST00000496498 RBM6P78332 1123 aaKnown RBP25.2■■□□□ 1.62
NPDC1-206ENST00000496498 UNC5CLQ8IV45 518 aa25.2■■□□□ 1.62
NPDC1-206ENST00000496498 SLC12A5Q9H2X9 1139 aa25.2■■□□□ 1.62
NPDC1-206ENST00000496498 SLIT3O75094 1523 aa25.2■■□□□ 1.62
NPDC1-206ENST00000496498 USP54Q70EL1 1684 aa25.19■■□□□ 1.62
NPDC1-206ENST00000496498 NUTM2GQ5VZR2 741 aa25.18■■□□□ 1.62
NPDC1-206ENST00000496498 A0A1W2PP64 1363 aa25.18■■□□□ 1.62
NPDC1-206ENST00000496498 CPDO75976 1380 aa25.18■■□□□ 1.62
NPDC1-206ENST00000496498 NLRP6P59044 892 aa25.17■■□□□ 1.62
NPDC1-206ENST00000496498 PRDM11Q9NQV5 511 aa25.17■■□□□ 1.62
NPDC1-206ENST00000496498 NRAPQ86VF7 1730 aa25.17■■□□□ 1.62
NPDC1-206ENST00000496498 ANKRD36BQ8N2N9 1353 aa25.17■■□□□ 1.62
NPDC1-206ENST00000496498 FAM83GA6ND36 823 aa25.16■■□□□ 1.62
NPDC1-206ENST00000496498 KIAA0232Q92628 1395 aa25.15■■□□□ 1.62
NPDC1-206ENST00000496498 GCP02774 474 aa25.13■■□□□ 1.61
NPDC1-206ENST00000496498 HSPA5P11021 654 aaKnown RBP25.13■■□□□ 1.61
NPDC1-206ENST00000496498 USP31Q70CQ4 1352 aa25.13■■□□□ 1.61
NPDC1-206ENST00000496498 MYOM1P52179 1685 aa25.13■■□□□ 1.61
NPDC1-206ENST00000496498 KCNH5Q8NCM2 988 aa25.12■■□□□ 1.61
NPDC1-206ENST00000496498 VPS72Q15906 364 aa25.11■■□□□ 1.61
NPDC1-206ENST00000496498 GJD4Q96KN9 370 aaPredicted RBP25.11■■□□□ 1.61
NPDC1-206ENST00000496498 ZC3H6P61129 1189 aaKnown RBP25.1■■□□□ 1.61
NPDC1-206ENST00000496498 BTG4Q9NY30 223 aa25.1■■□□□ 1.61
NPDC1-206ENST00000496498 LMO7Q8WWI1 1683 aa25.1■■□□□ 1.61
NPDC1-206ENST00000496498 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.08■■□□□ 1.61
NPDC1-206ENST00000496498 RGS12O14924 1447 aa25.08■■□□□ 1.61
NPDC1-206ENST00000496498 GLI3P10071 1580 aa25.08■■□□□ 1.61
NPDC1-206ENST00000496498 ABCC6O95255 1503 aa25.07■■□□□ 1.6
NPDC1-206ENST00000496498 NFAT5O94916 1531 aa25.06■■□□□ 1.6
NPDC1-206ENST00000496498 NME9Q86XW9 330 aa25.04■■□□□ 1.6
NPDC1-206ENST00000496498 AATKQ6ZMQ8 1374 aa25.04■■□□□ 1.6
NPDC1-206ENST00000496498 OVOS2A0A0J9YW53 1432 aa25.03■■□□□ 1.6
NPDC1-206ENST00000496498 OVOS2Q6IE36 1432 aa25.03■■□□□ 1.6
NPDC1-206ENST00000496498 CHRNA2Q15822 529 aa25.03■■□□□ 1.6
NPDC1-206ENST00000496498 CAMTA1Q9Y6Y1 1673 aa25.02■■□□□ 1.6
NPDC1-206ENST00000496498 CCDC9Q9Y3X0 531 aaKnown RBP25.02■■□□□ 1.6
NPDC1-206ENST00000496498 COL18A1P39060 1754 aa25■■□□□ 1.59
NPDC1-206ENST00000496498 KIF20BQ96Q89 1820 aa25■■□□□ 1.59
NPDC1-206ENST00000496498 COL5A2P05997 1499 aaPredicted RBP24.99■■□□□ 1.59
NPDC1-206ENST00000496498 ARHGEF25Q86VW2 580 aa24.99■■□□□ 1.59
NPDC1-206ENST00000496498 SPATA31A5Q5VU36 1347 aa24.98■■□□□ 1.59
NPDC1-206ENST00000496498 SPATA31A7Q8IWB4 1347 aa24.98■■□□□ 1.59
NPDC1-206ENST00000496498 EVA1CP58658 441 aa24.98■■□□□ 1.59
NPDC1-206ENST00000496498 ONECUT3O60422 494 aaPredicted RBP24.97■■□□□ 1.59
NPDC1-206ENST00000496498 COG3Q96JB2 828 aa24.97■■□□□ 1.59
NPDC1-206ENST00000496498 LTN1O94822 1766 aa24.97■■□□□ 1.59
NPDC1-206ENST00000496498 ZRANB1Q9UGI0 708 aa24.96■■□□□ 1.59
NPDC1-206ENST00000496498 POLR3GLQ9BT43 218 aa24.95■■□□□ 1.58
NPDC1-206ENST00000496498 STRN4Q9NRL3 753 aa24.95■■□□□ 1.58
NPDC1-206ENST00000496498 NSD3Q9BZ95 1437 aa24.95■■□□□ 1.58
NPDC1-206ENST00000496498 SPATA31A1Q5TZJ5 1347 aa24.93■■□□□ 1.58
NPDC1-206ENST00000496498 ZBTB7CA1YPR0 619 aa24.93■■□□□ 1.58
NPDC1-206ENST00000496498 SOX12O15370 315 aa24.93■■□□□ 1.58
NPDC1-206ENST00000496498 FYB1O15117 783 aa24.92■■□□□ 1.58
NPDC1-206ENST00000496498 THSD7AQ9UPZ6 1657 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms