RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 SMC4Q9NTJ3 1288 aa25.78■■□□□ 1.72
LYSMD4-209ENST00000496108 ABCA9Q8IUA7 1624 aa25.77■■□□□ 1.72
LYSMD4-209ENST00000496108 GBP4Q96PP9 640 aa25.76■■□□□ 1.71
LYSMD4-209ENST00000496108 ATF7IPQ6VMQ6 1270 aa25.76■■□□□ 1.71
LYSMD4-209ENST00000496108 ADGRB3O60242 1522 aa25.76■■□□□ 1.71
LYSMD4-209ENST00000496108 FANCAO15360 1455 aa25.75■■□□□ 1.71
LYSMD4-209ENST00000496108 HSP90AA2PQ14568 343 aaPredicted RBP25.75■■□□□ 1.71
LYSMD4-209ENST00000496108 PUS7Q96PZ0 661 aaKnown RBP25.75■■□□□ 1.71
LYSMD4-209ENST00000496108 CD109Q6YHK3 1445 aa25.74■■□□□ 1.71
LYSMD4-209ENST00000496108 ITPRIPQ8IWB1 547 aa25.73■■□□□ 1.71
LYSMD4-209ENST00000496108 TNPO1Q92973 898 aaKnown RBP25.73■■□□□ 1.71
LYSMD4-209ENST00000496108 ABCC11Q96J66 1382 aa25.73■■□□□ 1.71
LYSMD4-209ENST00000496108 RAB3GAP1Q15042 981 aa25.73■■□□□ 1.71
LYSMD4-209ENST00000496108 U2AF1L5P0DN76 240 aaPredicted RBP25.72■■□□□ 1.71
LYSMD4-209ENST00000496108 U2AF1Q01081 240 aaKnown RBP eCLIP25.72■■□□□ 1.71
LYSMD4-209ENST00000496108 IL16Q14005 1332 aa25.72■■□□□ 1.71
LYSMD4-209ENST00000496108 ADGRB1O14514 1584 aa25.72■■□□□ 1.71
LYSMD4-209ENST00000496108 NOS1P29475 1434 aa25.72■■□□□ 1.71
LYSMD4-209ENST00000496108 NUCB1Q02818 461 aa25.72■■□□□ 1.71
LYSMD4-209ENST00000496108 ERBB4Q15303 1308 aa25.71■■□□□ 1.71
LYSMD4-209ENST00000496108 KIF3BO15066 747 aa25.71■■□□□ 1.71
LYSMD4-209ENST00000496108 SSH1Q8WYL5 1049 aa25.71■■□□□ 1.71
LYSMD4-209ENST00000496108 TRIM44Q96DX7 344 aaPredicted RBP25.71■■□□□ 1.71
LYSMD4-209ENST00000496108 ZBTB40Q9NUA8 1239 aa25.71■■□□□ 1.71
LYSMD4-209ENST00000496108 EXOSC9Q06265 439 aaKnown RBP25.71■■□□□ 1.71
LYSMD4-209ENST00000496108 ANKRD36BQ8N2N9 1353 aa25.7■■□□□ 1.7
LYSMD4-209ENST00000496108 TSR2Q969E8 191 aaKnown RBP25.7■■□□□ 1.7
LYSMD4-209ENST00000496108 LMTK2Q8IWU2 1503 aa25.7■■□□□ 1.7
LYSMD4-209ENST00000496108 C14orf93Q9H972 538 aaKnown RBP25.69■■□□□ 1.7
LYSMD4-209ENST00000496108 KIF16BQ96L93 1317 aa25.68■■□□□ 1.7
LYSMD4-209ENST00000496108 HSP90AB1P08238 724 aaKnown RBP25.68■■□□□ 1.7
LYSMD4-209ENST00000496108 TRAK1Q9UPV9 953 aa25.67■■□□□ 1.7
LYSMD4-209ENST00000496108 CFAP74Q9C0B2 1584 aa25.67■■□□□ 1.7
LYSMD4-209ENST00000496108 BMP2KLQ5H9B9 411 aa25.67■■□□□ 1.7
LYSMD4-209ENST00000496108 GAS2L3Q86XJ1 694 aa25.67■■□□□ 1.7
LYSMD4-209ENST00000496108 PLEKHF1Q96S99 279 aa25.66■■□□□ 1.7
LYSMD4-209ENST00000496108 IPO8O15397 1037 aaKnown RBP25.65■■□□□ 1.7
LYSMD4-209ENST00000496108 TPM2P07951 284 aa25.65■■□□□ 1.7
LYSMD4-209ENST00000496108 TMEM57Q8N5G2 664 aa25.65■■□□□ 1.7
LYSMD4-209ENST00000496108 NOB1Q9ULX3 412 aaKnown RBP25.65■■□□□ 1.7
LYSMD4-209ENST00000496108 TMPOP42166 694 aaKnown RBP25.65■■□□□ 1.7
LYSMD4-209ENST00000496108 TRIM35Q9UPQ4 493 aa25.64■■□□□ 1.7
LYSMD4-209ENST00000496108 CHD1LQ86WJ1 897 aa25.64■■□□□ 1.69
LYSMD4-209ENST00000496108 PPLO60437 1756 aa25.64■■□□□ 1.69
LYSMD4-209ENST00000496108 IBTKQ9P2D0 1353 aaPredicted RBP25.63■■□□□ 1.69
LYSMD4-209ENST00000496108 CLEC17AQ6ZS10 378 aa25.63■■□□□ 1.69
LYSMD4-209ENST00000496108 KIF2CQ99661 725 aa25.63■■□□□ 1.69
LYSMD4-209ENST00000496108 COL3A1P02461 1466 aaPredicted RBP25.62■■□□□ 1.69
LYSMD4-209ENST00000496108 CCDC173Q0VFZ6 552 aa25.61■■□□□ 1.69
LYSMD4-209ENST00000496108 PKNOX2Q96KN3 472 aa25.61■■□□□ 1.69
LYSMD4-209ENST00000496108 ALDH1L2Q3SY69 923 aa25.61■■□□□ 1.69
LYSMD4-209ENST00000496108 MED14O60244 1454 aa25.6■■□□□ 1.69
LYSMD4-209ENST00000496108 PPP1R9BQ96SB3 815 aa25.6■■□□□ 1.69
LYSMD4-209ENST00000496108 EVC2Q86UK5 1308 aa25.6■■□□□ 1.69
LYSMD4-209ENST00000496108 TULP4Q9NRJ4 1543 aa25.6■■□□□ 1.69
LYSMD4-209ENST00000496108 REREQ9P2R6 1566 aa25.59■■□□□ 1.69
LYSMD4-209ENST00000496108 K7ELQ4 463 aaPredicted RBP25.59■■□□□ 1.69
LYSMD4-209ENST00000496108 LNPKQ9C0E8 428 aa25.59■■□□□ 1.69
LYSMD4-209ENST00000496108 ARHGAP31Q2M1Z3 1444 aa25.59■■□□□ 1.69
LYSMD4-209ENST00000496108 RPGRIP1LQ68CZ1 1315 aa25.57■■□□□ 1.68
LYSMD4-209ENST00000496108 BRPF1P55201 1214 aaPredicted RBP25.57■■□□□ 1.68
LYSMD4-209ENST00000496108 GOLGA6L22H0YM25 854 aa25.56■■□□□ 1.68
LYSMD4-209ENST00000496108 GCC1Q96CN9 775 aa25.56■■□□□ 1.68
LYSMD4-209ENST00000496108 VSIG10Q8N0Z9 540 aa25.56■■□□□ 1.68
LYSMD4-209ENST00000496108 ZNF428Q96B54 188 aa25.56■■□□□ 1.68
LYSMD4-209ENST00000496108 CHMP4BQ9H444 224 aaKnown RBP25.56■■□□□ 1.68
LYSMD4-209ENST00000496108 KLHL40Q2TBA0 621 aa25.54■■□□□ 1.68
LYSMD4-209ENST00000496108 U2SURPO15042 1029 aaKnown RBP25.52■■□□□ 1.68
LYSMD4-209ENST00000496108 NASPP49321 788 aaPredicted RBP25.52■■□□□ 1.68
LYSMD4-209ENST00000496108 ZSCAN30Q86W11 494 aa25.52■■□□□ 1.68
LYSMD4-209ENST00000496108 ARHGEF28Q8N1W1 1705 aaKnown RBP25.52■■□□□ 1.68
LYSMD4-209ENST00000496108 CD2BP2O95400 341 aaKnown RBP25.52■■□□□ 1.68
LYSMD4-209ENST00000496108 ZMYND15Q9H091 742 aa25.52■■□□□ 1.68
LYSMD4-209ENST00000496108 TMEM132EQ6IEE7 984 aa25.51■■□□□ 1.67
LYSMD4-209ENST00000496108 ANP32BQ92688 251 aaKnown RBP25.51■■□□□ 1.67
LYSMD4-209ENST00000496108 NEO1Q92859 1461 aa25.51■■□□□ 1.67
LYSMD4-209ENST00000496108 PIK3R4Q99570 1358 aa25.51■■□□□ 1.67
LYSMD4-209ENST00000496108 PPIP5K1Q6PFW1 1433 aa25.5■■□□□ 1.67
LYSMD4-209ENST00000496108 TBC1D9Q6ZT07 1266 aa25.5■■□□□ 1.67
LYSMD4-209ENST00000496108 RIPK4P57078 832 aa25.49■■□□□ 1.67
LYSMD4-209ENST00000496108 CHGAP10645 457 aaKnown RBP25.49■■□□□ 1.67
LYSMD4-209ENST00000496108 SSFA2P28290 1259 aa25.48■■□□□ 1.67
LYSMD4-209ENST00000496108 TERF1P54274 439 aa25.48■■□□□ 1.67
LYSMD4-209ENST00000496108 PDCL3Q9H2J4 239 aa25.48■■□□□ 1.67
LYSMD4-209ENST00000496108 A0A1W2PP64 1363 aa25.47■■□□□ 1.67
LYSMD4-209ENST00000496108 ANKRD26Q9UPS8 1709 aa25.47■■□□□ 1.67
LYSMD4-209ENST00000496108 NPATQ14207 1427 aa25.47■■□□□ 1.67
LYSMD4-209ENST00000496108 ANKRD45Q5TZF3 282 aa25.47■■□□□ 1.67
LYSMD4-209ENST00000496108 GAS2L2Q8NHY3 880 aa25.47■■□□□ 1.67
LYSMD4-209ENST00000496108 ZBTB7BO15156 539 aaPredicted RBP25.47■■□□□ 1.67
LYSMD4-209ENST00000496108 BAG4O95429 457 aaKnown RBP25.47■■□□□ 1.67
LYSMD4-209ENST00000496108 ARHGAP45Q92619 1136 aa25.47■■□□□ 1.67
LYSMD4-209ENST00000496108 PTCH1Q13635 1447 aa25.46■■□□□ 1.67
LYSMD4-209ENST00000496108 OFD1O75665 1012 aa25.46■■□□□ 1.67
LYSMD4-209ENST00000496108 ZNF445P59923 1031 aa25.46■■□□□ 1.67
LYSMD4-209ENST00000496108 HS1BP3Q53T59 392 aa25.46■■□□□ 1.67
LYSMD4-209ENST00000496108 CFAP44Q96MT7 982 aa25.46■■□□□ 1.67
LYSMD4-209ENST00000496108 KIDINS220Q9ULH0 1771 aa25.46■■□□□ 1.67
LYSMD4-209ENST00000496108 DDX49Q9Y6V7 483 aaKnown RBP25.45■■□□□ 1.67
LYSMD4-209ENST00000496108 KIAA1211Q6ZU35 1233 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms