RNA–Protein interactions for RNA: ENST00000496101.5

GCOM1-211, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-211ENST00000496101 SLC4A3P48751 1232 aa23.3■■□□□ 1.32
GCOM1-211ENST00000496101 ARHGEF40Q8TER5 1519 aa23.3■■□□□ 1.32
GCOM1-211ENST00000496101 PNPLA6Q8IY17 1366 aa23.3■■□□□ 1.32
GCOM1-211ENST00000496101 TMPOP42166 694 aaKnown RBP23.28■■□□□ 1.32
GCOM1-211ENST00000496101 PNNQ9H307 717 aaKnown RBP23.28■■□□□ 1.32
GCOM1-211ENST00000496101 TNNQ9UQP3 1299 aa23.28■■□□□ 1.32
GCOM1-211ENST00000496101 FYB1O15117 783 aa23.27■■□□□ 1.32
GCOM1-211ENST00000496101 STK26Q9P289 416 aa23.27■■□□□ 1.32
GCOM1-211ENST00000496101 GGNBP2Q9H3C7 697 aa23.26■■□□□ 1.31
GCOM1-211ENST00000496101 SAFB2Q14151 953 aaKnown RBP eCLIP23.26■■□□□ 1.31
GCOM1-211ENST00000496101 DZIP1LQ8IYY4 767 aaKnown RBP23.26■■□□□ 1.31
GCOM1-211ENST00000496101 PRAM1Q96QH2 718 aa23.26■■□□□ 1.31
GCOM1-211ENST00000496101 BCL2L13Q9BXK5 485 aa23.26■■□□□ 1.31
GCOM1-211ENST00000496101 HDGFL2Q7Z4V5 671 aaPredicted RBP23.25■■□□□ 1.31
GCOM1-211ENST00000496101 TRIM35Q9UPQ4 493 aa23.25■■□□□ 1.31
GCOM1-211ENST00000496101 PDZRN3Q9UPQ7 1066 aa23.25■■□□□ 1.31
GCOM1-211ENST00000496101 AGLP35573 1532 aa23.25■■□□□ 1.31
GCOM1-211ENST00000496101 POGKQ9P215 609 aa23.25■■□□□ 1.31
GCOM1-211ENST00000496101 ATP7BP35670 1465 aa23.25■■□□□ 1.31
GCOM1-211ENST00000496101 SETD1AO15047 1707 aaKnown RBP23.24■■□□□ 1.31
GCOM1-211ENST00000496101 MINK1Q8N4C8 1332 aaPredicted RBP23.24■■□□□ 1.31
GCOM1-211ENST00000496101 U2SURPO15042 1029 aaKnown RBP23.23■■□□□ 1.31
GCOM1-211ENST00000496101 BECN1Q14457 450 aa23.23■■□□□ 1.31
GCOM1-211ENST00000496101 GSE1Q14687 1217 aa23.23■■□□□ 1.31
GCOM1-211ENST00000496101 FTSJ3Q8IY81 847 aaKnown RBP23.23■■□□□ 1.31
GCOM1-211ENST00000496101 PPP6R1Q9UPN7 881 aa23.22■■□□□ 1.31
GCOM1-211ENST00000496101 EXOSC9Q06265 439 aaKnown RBP23.21■■□□□ 1.31
GCOM1-211ENST00000496101 DIAPH1O60610 1272 aaKnown RBP23.21■■□□□ 1.31
GCOM1-211ENST00000496101 SMC4Q9NTJ3 1288 aa23.21■■□□□ 1.31
GCOM1-211ENST00000496101 SEC24BO95487 1268 aa23.2■■□□□ 1.3
GCOM1-211ENST00000496101 TSR2Q969E8 191 aaKnown RBP23.2■■□□□ 1.3
GCOM1-211ENST00000496101 UPF2Q9HAU5 1272 aaKnown RBP23.2■■□□□ 1.3
GCOM1-211ENST00000496101 SPATA31D1Q6ZQQ2 1576 aa23.2■■□□□ 1.3
GCOM1-211ENST00000496101 LRRC7Q96NW7 1537 aa23.2■■□□□ 1.3
GCOM1-211ENST00000496101 HDAC1Q13547 482 aaPredicted RBP23.2■■□□□ 1.3
GCOM1-211ENST00000496101 DDX19BQ9UMR2 479 aa23.2■■□□□ 1.3
GCOM1-211ENST00000496101 CDK19Q9BWU1 502 aa23.18■■□□□ 1.3
GCOM1-211ENST00000496101 ATF7IPQ6VMQ6 1270 aa23.18■■□□□ 1.3
GCOM1-211ENST00000496101 TBC1D32Q96NH3 1257 aa23.18■■□□□ 1.3
GCOM1-211ENST00000496101 FAM135BQ49AJ0 1406 aa23.17■■□□□ 1.3
GCOM1-211ENST00000496101 PPIP5K1Q6PFW1 1433 aa23.17■■□□□ 1.3
GCOM1-211ENST00000496101 TRIM27P14373 513 aa23.17■■□□□ 1.3
GCOM1-211ENST00000496101 SSH1Q8WYL5 1049 aa23.17■■□□□ 1.3
GCOM1-211ENST00000496101 KIF16BQ96L93 1317 aa23.17■■□□□ 1.3
GCOM1-211ENST00000496101 FCHSD2O94868 740 aa23.16■■□□□ 1.3
GCOM1-211ENST00000496101 A2ML1A8K2U0 1454 aa23.16■■□□□ 1.3
GCOM1-211ENST00000496101 RIPK4P57078 832 aa23.15■■□□□ 1.3
GCOM1-211ENST00000496101 ALDH1L2Q3SY69 923 aa23.15■■□□□ 1.3
GCOM1-211ENST00000496101 ZNF428Q96B54 188 aa23.15■■□□□ 1.3
GCOM1-211ENST00000496101 DIP2BQ9P265 1576 aa23.14■■□□□ 1.29
GCOM1-211ENST00000496101 FBXO31Q5XUX0 539 aaPredicted RBP23.13■■□□□ 1.29
GCOM1-211ENST00000496101 IPO8O15397 1037 aaKnown RBP23.13■■□□□ 1.29
GCOM1-211ENST00000496101 BRPF1P55201 1214 aaPredicted RBP23.12■■□□□ 1.29
GCOM1-211ENST00000496101 CABP1Q9NZU7 370 aa23.12■■□□□ 1.29
GCOM1-211ENST00000496101 RIMS2Q9UQ26 1411 aa23.11■■□□□ 1.29
GCOM1-211ENST00000496101 FRAT2O75474 233 aaPredicted RBP23.11■■□□□ 1.29
GCOM1-211ENST00000496101 SMC5Q8IY18 1101 aa23.11■■□□□ 1.29
GCOM1-211ENST00000496101 KNDC1Q76NI1 1749 aa23.11■■□□□ 1.29
GCOM1-211ENST00000496101 ITPRIPQ8IWB1 547 aa23.09■■□□□ 1.29
GCOM1-211ENST00000496101 RSPH6AQ9H0K4 717 aa23.09■■□□□ 1.29
GCOM1-211ENST00000496101 NOB1Q9ULX3 412 aaKnown RBP23.09■■□□□ 1.29
GCOM1-211ENST00000496101 MAP2P11137 1827 aaKnown RBP23.09■■□□□ 1.29
GCOM1-211ENST00000496101 EDC4Q6P2E9 1401 aaKnown RBP23.09■■□□□ 1.29
GCOM1-211ENST00000496101 STAG3Q9UJ98 1225 aa23.09■■□□□ 1.29
GCOM1-211ENST00000496101 CDK12Q9NYV4 1490 aaPredicted RBP23.09■■□□□ 1.29
GCOM1-211ENST00000496101 CPSF1Q10570 1443 aaKnown RBP23.09■■□□□ 1.29
GCOM1-211ENST00000496101 NRXN3Q9Y4C0 1643 aa23.09■■□□□ 1.29
GCOM1-211ENST00000496101 ZBTB40Q9NUA8 1239 aa23.08■■□□□ 1.28
GCOM1-211ENST00000496101 CALD1Q05682 793 aaKnown RBP23.07■■□□□ 1.28
GCOM1-211ENST00000496101 POLKQ9UBT6 870 aa23.07■■□□□ 1.28
GCOM1-211ENST00000496101 MON2Q7Z3U7 1717 aa23.07■■□□□ 1.28
GCOM1-211ENST00000496101 TMEM57Q8N5G2 664 aa23.06■■□□□ 1.28
GCOM1-211ENST00000496101 AATKQ6ZMQ8 1374 aa23.06■■□□□ 1.28
GCOM1-211ENST00000496101 ANTXR1Q9H6X2 564 aa23.05■■□□□ 1.28
GCOM1-211ENST00000496101 PIK3R4Q99570 1358 aa23.04■■□□□ 1.28
GCOM1-211ENST00000496101 PRKAR2BP31323 418 aa23.04■■□□□ 1.28
GCOM1-211ENST00000496101 NFE2L2Q16236 605 aa23.04■■□□□ 1.28
GCOM1-211ENST00000496101 CHMP4BQ9H444 224 aaKnown RBP23.03■■□□□ 1.28
GCOM1-211ENST00000496101 PTCH1Q13635 1447 aa23.03■■□□□ 1.28
GCOM1-211ENST00000496101 AKAP12Q02952 1782 aa23.03■■□□□ 1.28
GCOM1-211ENST00000496101 TBC1D2Q9BYX2 928 aa23.02■■□□□ 1.28
GCOM1-211ENST00000496101 TECPR2O15040 1411 aa23.01■■□□□ 1.27
GCOM1-211ENST00000496101 ARHGAP45Q92619 1136 aa23.01■■□□□ 1.27
GCOM1-211ENST00000496101 SENP3Q9H4L4 574 aaPredicted RBP23.01■■□□□ 1.27
GCOM1-211ENST00000496101 ITSN1Q15811 1721 aa23■■□□□ 1.27
GCOM1-211ENST00000496101 CPS1P31327 1500 aa23■■□□□ 1.27
GCOM1-211ENST00000496101 SIRT1Q96EB6 747 aa22.99■■□□□ 1.27
GCOM1-211ENST00000496101 C3P01024 1663 aa22.99■■□□□ 1.27
GCOM1-211ENST00000496101 NUCB1Q02818 461 aa22.99■■□□□ 1.27
GCOM1-211ENST00000496101 WAPLQ7Z5K2 1190 aa22.99■■□□□ 1.27
GCOM1-211ENST00000496101 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.99■■□□□ 1.27
GCOM1-211ENST00000496101 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.99■■□□□ 1.27
GCOM1-211ENST00000496101 IL27Q8NEV9 243 aa22.99■■□□□ 1.27
GCOM1-211ENST00000496101 IFT57Q9NWB7 429 aa22.99■■□□□ 1.27
GCOM1-211ENST00000496101 WASLO00401 505 aaPredicted RBP22.98■■□□□ 1.27
GCOM1-211ENST00000496101 C22orf23Q9BZE7 217 aa22.98■■□□□ 1.27
GCOM1-211ENST00000496101 TRHP20396 242 aaPredicted RBP22.98■■□□□ 1.27
GCOM1-211ENST00000496101 IL13P35225 146 aa22.98■■□□□ 1.27
GCOM1-211ENST00000496101 GNAI1P63096 354 aa22.98■■□□□ 1.27
GCOM1-211ENST00000496101 TSPOAP1O95153 1857 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms