RNA–Protein interactions for RNA: ENST00000496049.1

GAPDH-210, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 2

Gene GAPDH, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-210ENST00000496049 WASLO00401 505 aaPredicted RBP20.7■□□□□ 0.9
GAPDH-210ENST00000496049 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.7■□□□□ 0.9
GAPDH-210ENST00000496049 FMN2Q9NZ56 1722 aa20.7■□□□□ 0.9
GAPDH-210ENST00000496049 CDK19Q9BWU1 502 aa20.69■□□□□ 0.9
GAPDH-210ENST00000496049 CABP2Q9NPB3 220 aa20.66■□□□□ 0.9
GAPDH-210ENST00000496049 ANKARQ7Z5J8 1434 aa20.66■□□□□ 0.9
GAPDH-210ENST00000496049 TOPAZ1Q8N9V7 1692 aa20.65■□□□□ 0.9
GAPDH-210ENST00000496049 C1orf167Q5SNV9 1468 aa20.65■□□□□ 0.9
GAPDH-210ENST00000496049 SOS2Q07890 1332 aaPredicted RBP20.65■□□□□ 0.9
GAPDH-210ENST00000496049 DDX10Q13206 875 aaKnown RBP20.65■□□□□ 0.9
GAPDH-210ENST00000496049 ATP7BP35670 1465 aa20.64■□□□□ 0.89
GAPDH-210ENST00000496049 R3HDM1Q15032 1099 aaKnown RBP20.62■□□□□ 0.89
GAPDH-210ENST00000496049 TMC1Q8TDI8 760 aa20.62■□□□□ 0.89
GAPDH-210ENST00000496049 ORAI2Q96SN7 254 aa20.61■□□□□ 0.89
GAPDH-210ENST00000496049 PPIP5K1Q6PFW1 1433 aa20.61■□□□□ 0.89
GAPDH-210ENST00000496049 USP32Q8NFA0 1604 aa20.6■□□□□ 0.89
GAPDH-210ENST00000496049 BAG6P46379 1132 aa20.6■□□□□ 0.89
GAPDH-210ENST00000496049 DIEXFQ68CQ4 756 aaKnown RBP20.6■□□□□ 0.89
GAPDH-210ENST00000496049 NUDT16Q96DE0 195 aaKnown RBP20.59■□□□□ 0.89
GAPDH-210ENST00000496049 SEPT12Q8IYM1 358 aa20.58■□□□□ 0.89
GAPDH-210ENST00000496049 CCDC61Q9Y6R9 512 aa20.58■□□□□ 0.89
GAPDH-210ENST00000496049 ANKRD36BQ8N2N9 1353 aa20.58■□□□□ 0.88
GAPDH-210ENST00000496049 SENP3-EIF4A1A0A087X0R7 540 aa20.57■□□□□ 0.88
GAPDH-210ENST00000496049 TERF2IPQ9NYB0 399 aa20.57■□□□□ 0.88
GAPDH-210ENST00000496049 KIF1AQ12756 1690 aa20.56■□□□□ 0.88
GAPDH-210ENST00000496049 RGPD8O14715 1765 aaPredicted RBP20.56■□□□□ 0.88
GAPDH-210ENST00000496049 HDGFL2Q7Z4V5 671 aaPredicted RBP20.55■□□□□ 0.88
GAPDH-210ENST00000496049 UNC5CLQ8IV45 518 aa20.55■□□□□ 0.88
GAPDH-210ENST00000496049 PRR36Q9H6K5 1346 aa20.54■□□□□ 0.88
GAPDH-210ENST00000496049 AKAP12Q02952 1782 aa20.54■□□□□ 0.88
GAPDH-210ENST00000496049 EN1Q05925 392 aaPredicted RBP20.54■□□□□ 0.88
GAPDH-210ENST00000496049 PANK3Q9H999 370 aa20.54■□□□□ 0.88
GAPDH-210ENST00000496049 RGPD1P0DJD0 1748 aa20.53■□□□□ 0.88
GAPDH-210ENST00000496049 NUTM2FA1L443 756 aa20.53■□□□□ 0.88
GAPDH-210ENST00000496049 KRT27Q7Z3Y8 459 aa20.53■□□□□ 0.88
GAPDH-210ENST00000496049 SLC12A5Q9H2X9 1139 aa20.53■□□□□ 0.88
GAPDH-210ENST00000496049 MON2Q7Z3U7 1717 aa20.53■□□□□ 0.88
GAPDH-210ENST00000496049 SLIT2O94813 1529 aa20.53■□□□□ 0.88
GAPDH-210ENST00000496049 CABP1Q9NZU7 370 aa20.52■□□□□ 0.88
GAPDH-210ENST00000496049 A0A1W2PP64 1363 aa20.51■□□□□ 0.87
GAPDH-210ENST00000496049 XPCQ01831 940 aaPredicted RBP20.5■□□□□ 0.87
GAPDH-210ENST00000496049 KNSTRNQ9Y448 316 aa20.5■□□□□ 0.87
GAPDH-210ENST00000496049 NSD3Q9BZ95 1437 aa20.5■□□□□ 0.87
GAPDH-210ENST00000496049 CD163L1Q9NR16 1453 aa20.5■□□□□ 0.87
GAPDH-210ENST00000496049 PLEKHG3A1L390 1219 aa20.49■□□□□ 0.87
GAPDH-210ENST00000496049 KTN1Q86UP2 1357 aaKnown RBP20.48■□□□□ 0.87
GAPDH-210ENST00000496049 A0A0G2JS52 829 aa20.48■□□□□ 0.87
GAPDH-210ENST00000496049 MYT1Q01538 1121 aa20.48■□□□□ 0.87
GAPDH-210ENST00000496049 PXDNQ92626 1479 aa20.48■□□□□ 0.87
GAPDH-210ENST00000496049 PLCH1Q4KWH8 1693 aa20.48■□□□□ 0.87
GAPDH-210ENST00000496049 CAMTA1Q9Y6Y1 1673 aa20.48■□□□□ 0.87
GAPDH-210ENST00000496049 CPSF1Q10570 1443 aaKnown RBP20.47■□□□□ 0.87
GAPDH-210ENST00000496049 ANP32CO43423 234 aa20.47■□□□□ 0.87
GAPDH-210ENST00000496049 NGDNQ8NEJ9 315 aaKnown RBP20.47■□□□□ 0.87
GAPDH-210ENST00000496049 ZNF692Q9BU19 519 aaPredicted RBP20.47■□□□□ 0.87
GAPDH-210ENST00000496049 CCDC9Q9Y3X0 531 aaKnown RBP20.47■□□□□ 0.87
GAPDH-210ENST00000496049 KIF20BQ96Q89 1820 aa20.47■□□□□ 0.87
GAPDH-210ENST00000496049 POLR3AO14802 1390 aaPredicted RBP20.46■□□□□ 0.87
GAPDH-210ENST00000496049 NRKQ7Z2Y5 1582 aa20.46■□□□□ 0.87
GAPDH-210ENST00000496049 EDC4Q6P2E9 1401 aaKnown RBP20.46■□□□□ 0.87
GAPDH-210ENST00000496049 ESCO1Q5FWF5 840 aa20.46■□□□□ 0.87
GAPDH-210ENST00000496049 PHF8Q9UPP1 1060 aa20.46■□□□□ 0.87
GAPDH-210ENST00000496049 TNS1Q9HBL0 1735 aaKnown RBP20.46■□□□□ 0.87
GAPDH-210ENST00000496049 ACEP12821 1306 aa20.45■□□□□ 0.86
GAPDH-210ENST00000496049 CGNL1Q0VF96 1302 aa20.44■□□□□ 0.86
GAPDH-210ENST00000496049 NPHP3Q7Z494 1330 aa20.44■□□□□ 0.86
GAPDH-210ENST00000496049 NSD2O96028 1365 aa20.44■□□□□ 0.86
GAPDH-210ENST00000496049 USP6P35125 1406 aa20.44■□□□□ 0.86
GAPDH-210ENST00000496049 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
GAPDH-210ENST00000496049 PMFBP1Q8TBY8 1022 aa20.43■□□□□ 0.86
GAPDH-210ENST00000496049 BRD4O60885 1362 aaPredicted RBP20.43■□□□□ 0.86
GAPDH-210ENST00000496049 NPC1L1Q9UHC9 1359 aa20.43■□□□□ 0.86
GAPDH-210ENST00000496049 ANKRD26Q9UPS8 1709 aa20.41■□□□□ 0.86
GAPDH-210ENST00000496049 PER1O15534 1290 aaPredicted RBP20.41■□□□□ 0.86
GAPDH-210ENST00000496049 VPS72Q15906 364 aa20.41■□□□□ 0.86
GAPDH-210ENST00000496049 NWD2Q9ULI1 1742 aa20.41■□□□□ 0.86
GAPDH-210ENST00000496049 EZH2Q15910 746 aaKnown RBP20.4■□□□□ 0.86
GAPDH-210ENST00000496049 FAM182BQ5T319 152 aa20.4■□□□□ 0.86
GAPDH-210ENST00000496049 ZNF784Q8NCA9 323 aaPredicted RBP20.4■□□□□ 0.86
GAPDH-210ENST00000496049 CARD14Q9BXL6 1004 aa20.4■□□□□ 0.86
GAPDH-210ENST00000496049 PPP1R1BQ9UD71 204 aaPredicted RBP20.39■□□□□ 0.85
GAPDH-210ENST00000496049 FOXO3O43524 673 aa20.38■□□□□ 0.85
GAPDH-210ENST00000496049 TTC21AQ8NDW8 1320 aa20.37■□□□□ 0.85
GAPDH-210ENST00000496049 ONECUT3O60422 494 aaPredicted RBP20.37■□□□□ 0.85
GAPDH-210ENST00000496049 AMER1Q5JTC6 1135 aaPredicted RBP20.37■□□□□ 0.85
GAPDH-210ENST00000496049 PLEKHG5O94827 1062 aa20.36■□□□□ 0.85
GAPDH-210ENST00000496049 PSME1Q06323 249 aa20.36■□□□□ 0.85
GAPDH-210ENST00000496049 RALBP1Q15311 655 aa20.36■□□□□ 0.85
GAPDH-210ENST00000496049 CC2D1BQ5T0F9 858 aaKnown RBP20.36■□□□□ 0.85
GAPDH-210ENST00000496049 DISP2A7MBM2 1401 aa20.36■□□□□ 0.85
GAPDH-210ENST00000496049 CNGB1Q14028 1251 aaPredicted RBP20.34■□□□□ 0.85
GAPDH-210ENST00000496049 FAM98CQ17RN3 349 aaKnown RBP20.34■□□□□ 0.85
GAPDH-210ENST00000496049 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.34■□□□□ 0.85
GAPDH-210ENST00000496049 SSH2Q76I76 1423 aa20.34■□□□□ 0.85
GAPDH-210ENST00000496049 PARD3Q8TEW0 1356 aa20.34■□□□□ 0.85
GAPDH-210ENST00000496049 TRPM3Q9HCF6 1732 aaPredicted RBP20.33■□□□□ 0.85
GAPDH-210ENST00000496049 TTC21BQ7Z4L5 1316 aa20.33■□□□□ 0.85
GAPDH-210ENST00000496049 HAP1P54257 671 aaPredicted RBP20.33■□□□□ 0.85
GAPDH-210ENST00000496049 C1QTNF8P60827 252 aa20.33■□□□□ 0.85
GAPDH-210ENST00000496049 PRKRIP1Q9H875 184 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms