RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 CEP350Q5VT06 3117 aa14.86□□□□□ -0.03
SMARCAL1-213ENST00000496037 TRIM37O94972 964 aa14.86□□□□□ -0.03
SMARCAL1-213ENST00000496037 CABLES1Q8TDN4 633 aa14.86□□□□□ -0.03
SMARCAL1-213ENST00000496037 NUP155O75694 1391 aa14.85□□□□□ -0.03
SMARCAL1-213ENST00000496037 NAIPQ13075 1403 aa14.85□□□□□ -0.03
SMARCAL1-213ENST00000496037 APBA3O96018 575 aa14.85□□□□□ -0.03
SMARCAL1-213ENST00000496037 FAM50AQ14320 339 aaKnown RBP14.85□□□□□ -0.03
SMARCAL1-213ENST00000496037 KRT28Q7Z3Y7 464 aa14.85□□□□□ -0.03
SMARCAL1-213ENST00000496037 NRAPQ86VF7 1730 aa14.84□□□□□ -0.03
SMARCAL1-213ENST00000496037 PSME1Q06323 249 aa14.83□□□□□ -0.04
SMARCAL1-213ENST00000496037 LMOD2Q6P5Q4 547 aa14.83□□□□□ -0.04
SMARCAL1-213ENST00000496037 FAM196AQ6ZSG2 479 aa14.83□□□□□ -0.04
SMARCAL1-213ENST00000496037 RREB1Q92766 1687 aa14.83□□□□□ -0.04
SMARCAL1-213ENST00000496037 FAM83GA6ND36 823 aa14.82□□□□□ -0.04
SMARCAL1-213ENST00000496037 VGFO15240 615 aaPredicted RBP14.82□□□□□ -0.04
SMARCAL1-213ENST00000496037 ZNF692Q9BU19 519 aaPredicted RBP14.82□□□□□ -0.04
SMARCAL1-213ENST00000496037 BTG4Q9NY30 223 aa14.82□□□□□ -0.04
SMARCAL1-213ENST00000496037 NUP188Q5SRE5 1749 aa14.82□□□□□ -0.04
SMARCAL1-213ENST00000496037 ABCA3Q99758 1704 aa14.82□□□□□ -0.04
SMARCAL1-213ENST00000496037 ARHGEF10O15013 1369 aa14.82□□□□□ -0.04
SMARCAL1-213ENST00000496037 THSD7AQ9UPZ6 1657 aa14.81□□□□□ -0.04
SMARCAL1-213ENST00000496037 CLTCL1P53675 1640 aa14.79□□□□□ -0.04
SMARCAL1-213ENST00000496037 SPATA31A5Q5VU36 1347 aa14.79□□□□□ -0.04
SMARCAL1-213ENST00000496037 SPATA31A7Q8IWB4 1347 aa14.79□□□□□ -0.04
SMARCAL1-213ENST00000496037 SBNO1A3KN83 1393 aa14.78□□□□□ -0.04
SMARCAL1-213ENST00000496037 NRKQ7Z2Y5 1582 aa14.77□□□□□ -0.04
SMARCAL1-213ENST00000496037 GIGYF1O75420 1035 aaPredicted RBP14.77□□□□□ -0.05
SMARCAL1-213ENST00000496037 COL14A1Q05707 1796 aaKnown RBP14.77□□□□□ -0.05
SMARCAL1-213ENST00000496037 FMN2Q9NZ56 1722 aa14.77□□□□□ -0.05
SMARCAL1-213ENST00000496037 RRBP1Q9P2E9 1410 aaKnown RBP14.76□□□□□ -0.05
SMARCAL1-213ENST00000496037 KIF1BO60333 1816 aa14.76□□□□□ -0.05
SMARCAL1-213ENST00000496037 REM2Q8IYK8 340 aaPredicted RBP14.75□□□□□ -0.05
SMARCAL1-213ENST00000496037 PHF8Q9UPP1 1060 aa14.75□□□□□ -0.05
SMARCAL1-213ENST00000496037 SSUH2Q9Y2M2 353 aa14.75□□□□□ -0.05
SMARCAL1-213ENST00000496037 ROCK1Q13464 1354 aa14.74□□□□□ -0.05
SMARCAL1-213ENST00000496037 WAPLQ7Z5K2 1190 aa14.73□□□□□ -0.05
SMARCAL1-213ENST00000496037 NRXN1Q9ULB1 1477 aa14.72□□□□□ -0.05
SMARCAL1-213ENST00000496037 STK26Q9P289 416 aa14.72□□□□□ -0.05
SMARCAL1-213ENST00000496037 TECPR2O15040 1411 aa14.72□□□□□ -0.05
SMARCAL1-213ENST00000496037 RPGRIP1LQ68CZ1 1315 aa14.71□□□□□ -0.05
SMARCAL1-213ENST00000496037 PDE3BQ13370 1112 aa14.71□□□□□ -0.05
SMARCAL1-213ENST00000496037 MYOM1P52179 1685 aa14.71□□□□□ -0.06
SMARCAL1-213ENST00000496037 SPATA31A1Q5TZJ5 1347 aa14.7□□□□□ -0.06
SMARCAL1-213ENST00000496037 CHD4Q14839 1912 aa14.7□□□□□ -0.06
SMARCAL1-213ENST00000496037 PRDM11Q9NQV5 511 aa14.69□□□□□ -0.06
SMARCAL1-213ENST00000496037 PLEKHH1Q9ULM0 1364 aa14.69□□□□□ -0.06
SMARCAL1-213ENST00000496037 ZBTB7AO95365 584 aa14.68□□□□□ -0.06
SMARCAL1-213ENST00000496037 SYT17Q9BSW7 474 aa14.67□□□□□ -0.06
SMARCAL1-213ENST00000496037 FHDC1Q9C0D6 1143 aaPredicted RBP14.67□□□□□ -0.06
SMARCAL1-213ENST00000496037 CASZ1Q86V15 1759 aa14.67□□□□□ -0.06
SMARCAL1-213ENST00000496037 KNDC1Q76NI1 1749 aa14.66□□□□□ -0.06
SMARCAL1-213ENST00000496037 IFT172Q9UG01 1749 aa14.66□□□□□ -0.06
SMARCAL1-213ENST00000496037 DLC1Q96QB1 1528 aa14.66□□□□□ -0.06
SMARCAL1-213ENST00000496037 PPLO60437 1756 aa14.65□□□□□ -0.06
SMARCAL1-213ENST00000496037 ABCC11Q96J66 1382 aa14.65□□□□□ -0.06
SMARCAL1-213ENST00000496037 STRN4Q9NRL3 753 aa14.65□□□□□ -0.06
SMARCAL1-213ENST00000496037 USP35Q9P2H5 1018 aa14.65□□□□□ -0.06
SMARCAL1-213ENST00000496037 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
SMARCAL1-213ENST00000496037 ANO8Q9HCE9 1232 aaPredicted RBP14.64□□□□□ -0.07
SMARCAL1-213ENST00000496037 RGPD8O14715 1765 aaPredicted RBP14.64□□□□□ -0.07
SMARCAL1-213ENST00000496037 PTGER2P43116 358 aa14.63□□□□□ -0.07
SMARCAL1-213ENST00000496037 CHRDL2Q6WN34 429 aa14.63□□□□□ -0.07
SMARCAL1-213ENST00000496037 PMFBP1Q8TBY8 1022 aa14.63□□□□□ -0.07
SMARCAL1-213ENST00000496037 GPRASP1Q5JY77 1395 aa14.62□□□□□ -0.07
SMARCAL1-213ENST00000496037 C11orf95C9JLR9 678 aaPredicted RBP14.62□□□□□ -0.07
SMARCAL1-213ENST00000496037 BARGINQ6ZT62 677 aa14.62□□□□□ -0.07
SMARCAL1-213ENST00000496037 BCL11BQ9C0K0 894 aaPredicted RBP14.62□□□□□ -0.07
SMARCAL1-213ENST00000496037 RGPD3A6NKT7 1758 aaPredicted RBP14.62□□□□□ -0.07
SMARCAL1-213ENST00000496037 RGPD4Q7Z3J3 1758 aa14.62□□□□□ -0.07
SMARCAL1-213ENST00000496037 TRPM3Q9HCF6 1732 aaPredicted RBP14.61□□□□□ -0.07
SMARCAL1-213ENST00000496037 GOLGB1Q14789 3259 aaKnown RBP14.61□□□□□ -0.07
SMARCAL1-213ENST00000496037 PDGFDQ9GZP0 370 aaPredicted RBP14.61□□□□□ -0.07
SMARCAL1-213ENST00000496037 DAXXQ9UER7 740 aaPredicted RBP14.61□□□□□ -0.07
SMARCAL1-213ENST00000496037 ALS2Q96Q42 1657 aa14.61□□□□□ -0.07
SMARCAL1-213ENST00000496037 GPR162Q16538 588 aa14.6□□□□□ -0.07
SMARCAL1-213ENST00000496037 KIAA0232Q92628 1395 aa14.6□□□□□ -0.07
SMARCAL1-213ENST00000496037 ANKARQ7Z5J8 1434 aa14.59□□□□□ -0.07
SMARCAL1-213ENST00000496037 YTHDC2Q9H6S0 1430 aaKnown RBP14.59□□□□□ -0.07
SMARCAL1-213ENST00000496037 TMEM132EQ6IEE7 984 aa14.59□□□□□ -0.07
SMARCAL1-213ENST00000496037 PLSCR1O15162 318 aa14.58□□□□□ -0.08
SMARCAL1-213ENST00000496037 ITGAEP38570 1179 aa14.58□□□□□ -0.08
SMARCAL1-213ENST00000496037 EVA1CP58658 441 aa14.58□□□□□ -0.08
SMARCAL1-213ENST00000496037 CHRNA2Q15822 529 aa14.58□□□□□ -0.08
SMARCAL1-213ENST00000496037 ADGRF5Q8IZF2 1346 aa14.58□□□□□ -0.08
SMARCAL1-213ENST00000496037 OVOS2A0A0G2JMS6 1433 aa14.58□□□□□ -0.08
SMARCAL1-213ENST00000496037 OVOS2A0A0J9YW53 1432 aa14.58□□□□□ -0.08
SMARCAL1-213ENST00000496037 OVOS2Q6IE36 1432 aa14.58□□□□□ -0.08
SMARCAL1-213ENST00000496037 SSH2Q76I76 1423 aa14.58□□□□□ -0.08
SMARCAL1-213ENST00000496037 PITPNM1O00562 1244 aa14.57□□□□□ -0.08
SMARCAL1-213ENST00000496037 TCP11L2Q8N4U5 519 aa14.57□□□□□ -0.08
SMARCAL1-213ENST00000496037 SPDYE1Q8NFV5 336 aaPredicted RBP14.57□□□□□ -0.08
SMARCAL1-213ENST00000496037 MTFR1LQ9H019 292 aa14.57□□□□□ -0.08
SMARCAL1-213ENST00000496037 STK32BQ9NY57 414 aa14.57□□□□□ -0.08
SMARCAL1-213ENST00000496037 CRYBG1Q9Y4K1 1723 aa14.57□□□□□ -0.08
SMARCAL1-213ENST00000496037 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
SMARCAL1-213ENST00000496037 SIRT1Q96EB6 747 aa14.56□□□□□ -0.08
SMARCAL1-213ENST00000496037 ACIN1Q9UKV3 1341 aaKnown RBP14.56□□□□□ -0.08
SMARCAL1-213ENST00000496037 ARXQ96QS3 562 aa14.55□□□□□ -0.08
SMARCAL1-213ENST00000496037 MAP3K5Q99683 1374 aa14.55□□□□□ -0.08
SMARCAL1-213ENST00000496037 SAFB2Q14151 953 aaKnown RBP eCLIP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms