RNA–Protein interactions for RNA: ENST00000495954.5

SCHIP1-208, Transcript of schwannomin interacting protein 1, humanhuman

TSL 2

Gene SCHIP1, Length 1,000 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCHIP1-208ENST00000495954 NRAPQ86VF7 1730 aa16.84■□□□□ 0.29
SCHIP1-208ENST00000495954 NGDNQ8NEJ9 315 aaKnown RBP16.83■□□□□ 0.28
SCHIP1-208ENST00000495954 NUDT16Q96DE0 195 aaKnown RBP16.83■□□□□ 0.28
SCHIP1-208ENST00000495954 COL14A1Q05707 1796 aaKnown RBP16.82■□□□□ 0.28
SCHIP1-208ENST00000495954 CDK19Q9BWU1 502 aa16.82■□□□□ 0.28
SCHIP1-208ENST00000495954 QRICH2Q9H0J4 1663 aa16.81■□□□□ 0.28
SCHIP1-208ENST00000495954 TRPM1Q7Z4N2 1603 aa16.81■□□□□ 0.28
SCHIP1-208ENST00000495954 HOXD11P31277 338 aaPredicted RBP16.81■□□□□ 0.28
SCHIP1-208ENST00000495954 VPS72Q15906 364 aa16.81■□□□□ 0.28
SCHIP1-208ENST00000495954 PHRF1Q9P1Y6 1649 aaKnown RBP16.81■□□□□ 0.28
SCHIP1-208ENST00000495954 POLR3AO14802 1390 aaPredicted RBP16.8■□□□□ 0.28
SCHIP1-208ENST00000495954 BRWD3Q6RI45 1802 aa16.8■□□□□ 0.28
SCHIP1-208ENST00000495954 FAM83GA6ND36 823 aa16.8■□□□□ 0.28
SCHIP1-208ENST00000495954 L3MBTL2Q969R5 705 aa16.8■□□□□ 0.28
SCHIP1-208ENST00000495954 PAK3O75914 559 aaPredicted RBP16.79■□□□□ 0.28
SCHIP1-208ENST00000495954 CENPJQ9HC77 1338 aaPredicted RBP16.78■□□□□ 0.28
SCHIP1-208ENST00000495954 CCDC125Q86Z20 511 aa16.78■□□□□ 0.28
SCHIP1-208ENST00000495954 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
SCHIP1-208ENST00000495954 CCDC61Q9Y6R9 512 aa16.78■□□□□ 0.28
SCHIP1-208ENST00000495954 ACEP12821 1306 aa16.76■□□□□ 0.27
SCHIP1-208ENST00000495954 PLEKHG3A1L390 1219 aa16.76■□□□□ 0.27
SCHIP1-208ENST00000495954 CNKSR2Q8WXI2 1034 aa16.76■□□□□ 0.27
SCHIP1-208ENST00000495954 DEFB132Q7Z7B7 95 aa16.75■□□□□ 0.27
SCHIP1-208ENST00000495954 SEPT12Q8IYM1 358 aa16.75■□□□□ 0.27
SCHIP1-208ENST00000495954 BTG4Q9NY30 223 aa16.75■□□□□ 0.27
SCHIP1-208ENST00000495954 CCDC9Q9Y3X0 531 aaKnown RBP16.75■□□□□ 0.27
SCHIP1-208ENST00000495954 PPIP5K1Q6PFW1 1433 aa16.74■□□□□ 0.27
SCHIP1-208ENST00000495954 ONECUT3O60422 494 aaPredicted RBP16.74■□□□□ 0.27
SCHIP1-208ENST00000495954 NBPF8Q3BBV2 869 aa16.74■□□□□ 0.27
SCHIP1-208ENST00000495954 NRKQ7Z2Y5 1582 aa16.73■□□□□ 0.27
SCHIP1-208ENST00000495954 BLMP54132 1417 aaPredicted RBP16.73■□□□□ 0.27
SCHIP1-208ENST00000495954 SRPK2P78362 688 aaKnown RBP16.73■□□□□ 0.27
SCHIP1-208ENST00000495954 NEUROD1Q13562 356 aa16.73■□□□□ 0.27
SCHIP1-208ENST00000495954 PRDM11Q9NQV5 511 aa16.72■□□□□ 0.27
SCHIP1-208ENST00000495954 CABP2Q9NPB3 220 aa16.71■□□□□ 0.27
SCHIP1-208ENST00000495954 ROCK2O75116 1388 aaKnown RBP16.71■□□□□ 0.27
SCHIP1-208ENST00000495954 KIAA0232Q92628 1395 aa16.71■□□□□ 0.27
SCHIP1-208ENST00000495954 THSD7AQ9UPZ6 1657 aa16.7■□□□□ 0.26
SCHIP1-208ENST00000495954 NUTM2GQ5VZR2 741 aa16.7■□□□□ 0.26
SCHIP1-208ENST00000495954 KRT27Q7Z3Y8 459 aa16.69■□□□□ 0.26
SCHIP1-208ENST00000495954 SPATA31A5Q5VU36 1347 aa16.69■□□□□ 0.26
SCHIP1-208ENST00000495954 SPATA31A7Q8IWB4 1347 aa16.69■□□□□ 0.26
SCHIP1-208ENST00000495954 BRD4O60885 1362 aaPredicted RBP16.68■□□□□ 0.26
SCHIP1-208ENST00000495954 FAM98CQ17RN3 349 aaKnown RBP16.68■□□□□ 0.26
SCHIP1-208ENST00000495954 ABTB2Q8N961 1025 aa16.68■□□□□ 0.26
SCHIP1-208ENST00000495954 USP6P35125 1406 aa16.68■□□□□ 0.26
SCHIP1-208ENST00000495954 LMO7Q8WWI1 1683 aa16.68■□□□□ 0.26
SCHIP1-208ENST00000495954 USP19O94966 1318 aa16.68■□□□□ 0.26
SCHIP1-208ENST00000495954 EVC2Q86UK5 1308 aa16.68■□□□□ 0.26
SCHIP1-208ENST00000495954 A0A0G2JS52 829 aa16.67■□□□□ 0.26
SCHIP1-208ENST00000495954 ZC3H6P61129 1189 aaKnown RBP16.67■□□□□ 0.26
SCHIP1-208ENST00000495954 MYT1Q01538 1121 aa16.67■□□□□ 0.26
SCHIP1-208ENST00000495954 CHRNA2Q15822 529 aa16.67■□□□□ 0.26
SCHIP1-208ENST00000495954 LRP5O75197 1615 aa16.66■□□□□ 0.26
SCHIP1-208ENST00000495954 CPDO75976 1380 aa16.65■□□□□ 0.26
SCHIP1-208ENST00000495954 DCAF8L1A6NGE4 600 aa16.65■□□□□ 0.26
SCHIP1-208ENST00000495954 CABP1Q9NZU7 370 aa16.65■□□□□ 0.26
SCHIP1-208ENST00000495954 AKAP12Q02952 1782 aa16.64■□□□□ 0.25
SCHIP1-208ENST00000495954 NLRP13Q86W25 1043 aa16.64■□□□□ 0.25
SCHIP1-208ENST00000495954 PIK3C2AO00443 1686 aa16.64■□□□□ 0.25
SCHIP1-208ENST00000495954 CAMTA1Q9Y6Y1 1673 aa16.64■□□□□ 0.25
SCHIP1-208ENST00000495954 SLIT3O75094 1523 aa16.64■□□□□ 0.25
SCHIP1-208ENST00000495954 SPATA31A1Q5TZJ5 1347 aa16.64■□□□□ 0.25
SCHIP1-208ENST00000495954 SSH2Q76I76 1423 aa16.63■□□□□ 0.25
SCHIP1-208ENST00000495954 SF3B2Q13435 895 aaKnown RBP16.63■□□□□ 0.25
SCHIP1-208ENST00000495954 STRN4Q9NRL3 753 aa16.63■□□□□ 0.25
SCHIP1-208ENST00000495954 RNF216Q9NWF9 866 aaPredicted RBP16.63■□□□□ 0.25
SCHIP1-208ENST00000495954 PSDA5PKW4 1024 aaPredicted RBP16.62■□□□□ 0.25
SCHIP1-208ENST00000495954 SBNO2Q9Y2G9 1366 aa16.62■□□□□ 0.25
SCHIP1-208ENST00000495954 RGPD1P0DJD0 1748 aa16.62■□□□□ 0.25
SCHIP1-208ENST00000495954 GCP02774 474 aa16.61■□□□□ 0.25
SCHIP1-208ENST00000495954 TONSLQ96HA7 1378 aa16.61■□□□□ 0.25
SCHIP1-208ENST00000495954 COL5A2P05997 1499 aaPredicted RBP16.59■□□□□ 0.25
SCHIP1-208ENST00000495954 MON2Q7Z3U7 1717 aa16.59■□□□□ 0.25
SCHIP1-208ENST00000495954 TNS1Q9HBL0 1735 aaKnown RBP16.59■□□□□ 0.25
SCHIP1-208ENST00000495954 EVA1CP58658 441 aa16.58■□□□□ 0.24
SCHIP1-208ENST00000495954 NLRP6P59044 892 aa16.58■□□□□ 0.24
SCHIP1-208ENST00000495954 CARD11Q9BXL7 1154 aa16.58■□□□□ 0.24
SCHIP1-208ENST00000495954 CPSF1Q10570 1443 aaKnown RBP16.58■□□□□ 0.24
SCHIP1-208ENST00000495954 FAM182BQ5T319 152 aa16.57■□□□□ 0.24
SCHIP1-208ENST00000495954 LARP1Q6PKG0 1096 aaKnown RBP16.57■□□□□ 0.24
SCHIP1-208ENST00000495954 BARGINQ6ZT62 677 aa16.57■□□□□ 0.24
SCHIP1-208ENST00000495954 USP35Q9P2H5 1018 aa16.57■□□□□ 0.24
SCHIP1-208ENST00000495954 COL18A1P39060 1754 aa16.56■□□□□ 0.24
SCHIP1-208ENST00000495954 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
SCHIP1-208ENST00000495954 AATKQ6ZMQ8 1374 aa16.55■□□□□ 0.24
SCHIP1-208ENST00000495954 TTC21BQ7Z4L5 1316 aa16.55■□□□□ 0.24
SCHIP1-208ENST00000495954 BAG6P46379 1132 aa16.55■□□□□ 0.24
SCHIP1-208ENST00000495954 TRIM26Q12899 539 aaPredicted RBP16.55■□□□□ 0.24
SCHIP1-208ENST00000495954 PARP4Q9UKK3 1724 aaKnown RBP16.54■□□□□ 0.24
SCHIP1-208ENST00000495954 TTC21AQ8NDW8 1320 aa16.54■□□□□ 0.24
SCHIP1-208ENST00000495954 TCP11L2Q8N4U5 519 aa16.54■□□□□ 0.24
SCHIP1-208ENST00000495954 DISP2A7MBM2 1401 aa16.53■□□□□ 0.24
SCHIP1-208ENST00000495954 CRB1P82279 1406 aa16.53■□□□□ 0.24
SCHIP1-208ENST00000495954 KTN1Q86UP2 1357 aaKnown RBP16.53■□□□□ 0.24
SCHIP1-208ENST00000495954 USP54Q70EL1 1684 aa16.53■□□□□ 0.24
SCHIP1-208ENST00000495954 EN1Q05925 392 aaPredicted RBP16.53■□□□□ 0.24
SCHIP1-208ENST00000495954 THRAP3Q9Y2W1 955 aaKnown RBP16.53■□□□□ 0.24
SCHIP1-208ENST00000495954 ZBTB7CA1YPR0 619 aa16.52■□□□□ 0.24
SCHIP1-208ENST00000495954 CD163L1Q9NR16 1453 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms