RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 CCDC61Q9Y6R9 512 aa26.59■■□□□ 1.85
CLCNKA-207ENST00000495784 A0A0G2JS52 829 aa26.56■■□□□ 1.84
CLCNKA-207ENST00000495784 ONECUT3O60422 494 aaPredicted RBP26.56■■□□□ 1.84
CLCNKA-207ENST00000495784 MYT1Q01538 1121 aa26.56■■□□□ 1.84
CLCNKA-207ENST00000495784 COL14A1Q05707 1796 aaKnown RBP26.56■■□□□ 1.84
CLCNKA-207ENST00000495784 PRDM11Q9NQV5 511 aa26.55■■□□□ 1.84
CLCNKA-207ENST00000495784 ACEP12821 1306 aa26.55■■□□□ 1.84
CLCNKA-207ENST00000495784 CENPJQ9HC77 1338 aaPredicted RBP26.55■■□□□ 1.84
CLCNKA-207ENST00000495784 L3MBTL2Q969R5 705 aa26.54■■□□□ 1.84
CLCNKA-207ENST00000495784 POLR3AO14802 1390 aaPredicted RBP26.54■■□□□ 1.84
CLCNKA-207ENST00000495784 BLMP54132 1417 aaPredicted RBP26.54■■□□□ 1.84
CLCNKA-207ENST00000495784 SRPK2P78362 688 aaKnown RBP26.53■■□□□ 1.84
CLCNKA-207ENST00000495784 NBPF8Q3BBV2 869 aa26.53■■□□□ 1.84
CLCNKA-207ENST00000495784 NRAPQ86VF7 1730 aa26.53■■□□□ 1.84
CLCNKA-207ENST00000495784 PLEKHG3A1L390 1219 aa26.52■■□□□ 1.84
CLCNKA-207ENST00000495784 BRWD3Q6RI45 1802 aa26.52■■□□□ 1.84
CLCNKA-207ENST00000495784 KRT27Q7Z3Y8 459 aa26.52■■□□□ 1.84
CLCNKA-207ENST00000495784 TOPAZ1Q8N9V7 1692 aa26.52■■□□□ 1.84
CLCNKA-207ENST00000495784 CRYBG1Q9Y4K1 1723 aa26.51■■□□□ 1.83
CLCNKA-207ENST00000495784 FAM98CQ17RN3 349 aaKnown RBP26.51■■□□□ 1.83
CLCNKA-207ENST00000495784 ZRANB1Q9UGI0 708 aa26.51■■□□□ 1.83
CLCNKA-207ENST00000495784 NUTM2GQ5VZR2 741 aa26.5■■□□□ 1.83
CLCNKA-207ENST00000495784 KIAA0232Q92628 1395 aa26.49■■□□□ 1.83
CLCNKA-207ENST00000495784 SF3B2Q13435 895 aaKnown RBP26.49■■□□□ 1.83
CLCNKA-207ENST00000495784 SIN3AQ96ST3 1273 aa26.49■■□□□ 1.83
CLCNKA-207ENST00000495784 NEUROD1Q13562 356 aa26.47■■□□□ 1.83
CLCNKA-207ENST00000495784 CABP2Q9NPB3 220 aa26.47■■□□□ 1.83
CLCNKA-207ENST00000495784 PPIP5K1Q6PFW1 1433 aa26.47■■□□□ 1.83
CLCNKA-207ENST00000495784 SPATA31A5Q5VU36 1347 aa26.46■■□□□ 1.83
CLCNKA-207ENST00000495784 SPATA31A7Q8IWB4 1347 aa26.46■■□□□ 1.83
CLCNKA-207ENST00000495784 ZC3H6P61129 1189 aaKnown RBP26.46■■□□□ 1.83
CLCNKA-207ENST00000495784 CHRNA2Q15822 529 aa26.46■■□□□ 1.83
CLCNKA-207ENST00000495784 ABTB2Q8N961 1025 aa26.46■■□□□ 1.83
CLCNKA-207ENST00000495784 PHRF1Q9P1Y6 1649 aaKnown RBP26.44■■□□□ 1.82
CLCNKA-207ENST00000495784 QRICH2Q9H0J4 1663 aa26.44■■□□□ 1.82
CLCNKA-207ENST00000495784 DEFB132Q7Z7B7 95 aa26.43■■□□□ 1.82
CLCNKA-207ENST00000495784 STRN4Q9NRL3 753 aa26.42■■□□□ 1.82
CLCNKA-207ENST00000495784 ROCK2O75116 1388 aaKnown RBP26.4■■□□□ 1.82
CLCNKA-207ENST00000495784 NLRP13Q86W25 1043 aa26.39■■□□□ 1.82
CLCNKA-207ENST00000495784 TRPM1Q7Z4N2 1603 aa26.39■■□□□ 1.81
CLCNKA-207ENST00000495784 EVC2Q86UK5 1308 aa26.39■■□□□ 1.81
CLCNKA-207ENST00000495784 EVA1CP58658 441 aa26.38■■□□□ 1.81
CLCNKA-207ENST00000495784 CABP1Q9NZU7 370 aa26.38■■□□□ 1.81
CLCNKA-207ENST00000495784 USP19O94966 1318 aa26.38■■□□□ 1.81
CLCNKA-207ENST00000495784 SPATA31A1Q5TZJ5 1347 aa26.38■■□□□ 1.81
CLCNKA-207ENST00000495784 BRD4O60885 1362 aaPredicted RBP26.37■■□□□ 1.81
CLCNKA-207ENST00000495784 NRKQ7Z2Y5 1582 aa26.37■■□□□ 1.81
CLCNKA-207ENST00000495784 CPDO75976 1380 aa26.34■■□□□ 1.81
CLCNKA-207ENST00000495784 BAG6P46379 1132 aa26.34■■□□□ 1.81
CLCNKA-207ENST00000495784 USP35Q9P2H5 1018 aa26.34■■□□□ 1.81
CLCNKA-207ENST00000495784 THSD7AQ9UPZ6 1657 aa26.34■■□□□ 1.81
CLCNKA-207ENST00000495784 USP6P35125 1406 aa26.33■■□□□ 1.81
CLCNKA-207ENST00000495784 GCP02774 474 aa26.33■■□□□ 1.81
CLCNKA-207ENST00000495784 FAM182BQ5T319 152 aa26.33■■□□□ 1.81
CLCNKA-207ENST00000495784 SSH2Q76I76 1423 aa26.32■■□□□ 1.8
CLCNKA-207ENST00000495784 SRCAPQ6ZRS2 3230 aa26.31■■□□□ 1.8
CLCNKA-207ENST00000495784 NLRP6P59044 892 aa26.3■■□□□ 1.8
CLCNKA-207ENST00000495784 CAMTA1Q9Y6Y1 1673 aa26.3■■□□□ 1.8
CLCNKA-207ENST00000495784 LARP1Q6PKG0 1096 aaKnown RBP26.28■■□□□ 1.8
CLCNKA-207ENST00000495784 ZBTB7CA1YPR0 619 aa26.27■■□□□ 1.8
CLCNKA-207ENST00000495784 BARGINQ6ZT62 677 aa26.27■■□□□ 1.8
CLCNKA-207ENST00000495784 LMO7Q8WWI1 1683 aa26.26■■□□□ 1.79
CLCNKA-207ENST00000495784 TCP11L2Q8N4U5 519 aa26.25■■□□□ 1.79
CLCNKA-207ENST00000495784 RGPD1P0DJD0 1748 aa26.25■■□□□ 1.79
CLCNKA-207ENST00000495784 FAM196AQ6ZSG2 479 aa26.24■■□□□ 1.79
CLCNKA-207ENST00000495784 ZNF692Q9BU19 519 aaPredicted RBP26.24■■□□□ 1.79
CLCNKA-207ENST00000495784 EN1Q05925 392 aaPredicted RBP26.23■■□□□ 1.79
CLCNKA-207ENST00000495784 PDE3BQ13370 1112 aa26.23■■□□□ 1.79
CLCNKA-207ENST00000495784 COL5A2P05997 1499 aaPredicted RBP26.23■■□□□ 1.79
CLCNKA-207ENST00000495784 CARD11Q9BXL7 1154 aa26.22■■□□□ 1.79
CLCNKA-207ENST00000495784 SLIT3O75094 1523 aa26.22■■□□□ 1.79
CLCNKA-207ENST00000495784 TONSLQ96HA7 1378 aa26.21■■□□□ 1.79
CLCNKA-207ENST00000495784 THRAP3Q9Y2W1 955 aaKnown RBP26.21■■□□□ 1.79
CLCNKA-207ENST00000495784 TTC21BQ7Z4L5 1316 aa26.2■■□□□ 1.79
CLCNKA-207ENST00000495784 PIK3C2AO00443 1686 aa26.2■■□□□ 1.78
CLCNKA-207ENST00000495784 AATKQ6ZMQ8 1374 aa26.2■■□□□ 1.78
CLCNKA-207ENST00000495784 TRIM37O94972 964 aa26.19■■□□□ 1.78
CLCNKA-207ENST00000495784 DISP2A7MBM2 1401 aa26.18■■□□□ 1.78
CLCNKA-207ENST00000495784 SBNO2Q9Y2G9 1366 aa26.18■■□□□ 1.78
CLCNKA-207ENST00000495784 TTC21AQ8NDW8 1320 aa26.17■■□□□ 1.78
CLCNKA-207ENST00000495784 CRB1P82279 1406 aa26.17■■□□□ 1.78
CLCNKA-207ENST00000495784 PSDA5PKW4 1024 aaPredicted RBP26.16■■□□□ 1.78
CLCNKA-207ENST00000495784 KCNH5Q8NCM2 988 aa26.16■■□□□ 1.78
CLCNKA-207ENST00000495784 KTN1Q86UP2 1357 aaKnown RBP26.16■■□□□ 1.78
CLCNKA-207ENST00000495784 CPSF1Q10570 1443 aaKnown RBP26.15■■□□□ 1.78
CLCNKA-207ENST00000495784 TNS1Q9HBL0 1735 aaKnown RBP26.15■■□□□ 1.78
CLCNKA-207ENST00000495784 SOX12O15370 315 aa26.14■■□□□ 1.78
CLCNKA-207ENST00000495784 AKAP12Q02952 1782 aa26.14■■□□□ 1.78
CLCNKA-207ENST00000495784 APBA3O96018 575 aa26.13■■□□□ 1.77
CLCNKA-207ENST00000495784 TOM1L2Q6ZVM7 507 aa26.13■■□□□ 1.77
CLCNKA-207ENST00000495784 EZH2Q15910 746 aaKnown RBP26.12■■□□□ 1.77
CLCNKA-207ENST00000495784 ARHGEF25Q86VW2 580 aa26.11■■□□□ 1.77
CLCNKA-207ENST00000495784 TMC1Q8TDI8 760 aa26.1■■□□□ 1.77
CLCNKA-207ENST00000495784 AXIN2Q9Y2T1 843 aa26.1■■□□□ 1.77
CLCNKA-207ENST00000495784 CAMKK2Q96RR4 588 aa26.09■■□□□ 1.77
CLCNKA-207ENST00000495784 WDR17Q8IZU2 1322 aa26.09■■□□□ 1.77
CLCNKA-207ENST00000495784 PARD3Q8TEW0 1356 aa26.08■■□□□ 1.77
CLCNKA-207ENST00000495784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.08■■□□□ 1.77
CLCNKA-207ENST00000495784 PARP4Q9UKK3 1724 aaKnown RBP26.08■■□□□ 1.76
CLCNKA-207ENST00000495784 COL18A1P39060 1754 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms