RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 NRKQ7Z2Y5 1582 aa27.94■■■□□ 2.06
LMO4-204ENST00000495705 ABCA3Q99758 1704 aa27.93■■■□□ 2.06
LMO4-204ENST00000495705 NUTM2BA6NNL0 878 aaPredicted RBP27.93■■■□□ 2.06
LMO4-204ENST00000495705 NUTM2EB1AL46 878 aaPredicted RBP27.93■■■□□ 2.06
LMO4-204ENST00000495705 HDGFL2Q7Z4V5 671 aaPredicted RBP27.93■■■□□ 2.06
LMO4-204ENST00000495705 NUTM2AQ8IVF1 878 aaPredicted RBP27.93■■■□□ 2.06
LMO4-204ENST00000495705 SLC12A5Q9H2X9 1139 aa27.93■■■□□ 2.06
LMO4-204ENST00000495705 TERF2IPQ9NYB0 399 aa27.93■■■□□ 2.06
LMO4-204ENST00000495705 KTN1Q86UP2 1357 aaKnown RBP27.93■■■□□ 2.06
LMO4-204ENST00000495705 SSH2Q76I76 1423 aa27.92■■■□□ 2.06
LMO4-204ENST00000495705 MYOM1P52179 1685 aa27.91■■■□□ 2.06
LMO4-204ENST00000495705 ZEB1P37275 1124 aaPredicted RBP27.9■■■□□ 2.06
LMO4-204ENST00000495705 MEX3CQ5U5Q3 659 aaKnown RBP27.9■■■□□ 2.06
LMO4-204ENST00000495705 MARF1Q9Y4F3 1742 aaKnown RBP27.89■■■□□ 2.06
LMO4-204ENST00000495705 A0A1W2PP64 1363 aa27.89■■■□□ 2.06
LMO4-204ENST00000495705 CRYBG1Q9Y4K1 1723 aa27.89■■■□□ 2.05
LMO4-204ENST00000495705 ANKRD36BQ8N2N9 1353 aa27.87■■■□□ 2.05
LMO4-204ENST00000495705 TTC21AQ8NDW8 1320 aa27.87■■■□□ 2.05
LMO4-204ENST00000495705 EDC4Q6P2E9 1401 aaKnown RBP27.86■■■□□ 2.05
LMO4-204ENST00000495705 ABTB2Q8N961 1025 aa27.86■■■□□ 2.05
LMO4-204ENST00000495705 PHF23Q9BUL5 403 aaPredicted RBP27.86■■■□□ 2.05
LMO4-204ENST00000495705 PIK3C2AO00443 1686 aa27.86■■■□□ 2.05
LMO4-204ENST00000495705 TTC21BQ7Z4L5 1316 aa27.86■■■□□ 2.05
LMO4-204ENST00000495705 HAP1P54257 671 aaPredicted RBP27.85■■■□□ 2.05
LMO4-204ENST00000495705 PHRF1Q9P1Y6 1649 aaKnown RBP27.85■■■□□ 2.05
LMO4-204ENST00000495705 ADAMTS2O95450 1211 aa27.82■■■□□ 2.04
LMO4-204ENST00000495705 CABLES1Q8TDN4 633 aa27.82■■■□□ 2.04
LMO4-204ENST00000495705 NLRP13Q86W25 1043 aa27.81■■■□□ 2.04
LMO4-204ENST00000495705 POLR3GLQ9BT43 218 aa27.81■■■□□ 2.04
LMO4-204ENST00000495705 USP19O94966 1318 aa27.79■■■□□ 2.04
LMO4-204ENST00000495705 PLEKHG5O94827 1062 aa27.79■■■□□ 2.04
LMO4-204ENST00000495705 NUTM2GQ5VZR2 741 aa27.79■■■□□ 2.04
LMO4-204ENST00000495705 USP54Q70EL1 1684 aa27.78■■■□□ 2.04
LMO4-204ENST00000495705 C8orf37Q96NL8 207 aa27.78■■■□□ 2.04
LMO4-204ENST00000495705 C11orf95C9JLR9 678 aaPredicted RBP27.77■■■□□ 2.04
LMO4-204ENST00000495705 NLRP6P59044 892 aa27.77■■■□□ 2.04
LMO4-204ENST00000495705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.77■■■□□ 2.04
LMO4-204ENST00000495705 SLIT3O75094 1523 aa27.76■■■□□ 2.03
LMO4-204ENST00000495705 KIF7Q2M1P5 1343 aa27.74■■■□□ 2.03
LMO4-204ENST00000495705 NGLY1Q96IV0 654 aa27.74■■■□□ 2.03
LMO4-204ENST00000495705 USP31Q70CQ4 1352 aa27.73■■■□□ 2.03
LMO4-204ENST00000495705 AFF2P51816 1311 aa27.72■■■□□ 2.03
LMO4-204ENST00000495705 ZNF772Q68DY9 489 aaPredicted RBP27.72■■■□□ 2.03
LMO4-204ENST00000495705 COL14A1Q05707 1796 aaKnown RBP27.71■■■□□ 2.03
LMO4-204ENST00000495705 PLCH1Q4KWH8 1693 aa27.71■■■□□ 2.03
LMO4-204ENST00000495705 NWD2Q9ULI1 1742 aa27.7■■■□□ 2.03
LMO4-204ENST00000495705 KIF20BQ96Q89 1820 aa27.7■■■□□ 2.02
LMO4-204ENST00000495705 NME9Q86XW9 330 aa27.7■■■□□ 2.02
LMO4-204ENST00000495705 RGS17Q9UGC6 210 aaPredicted RBP27.7■■■□□ 2.02
LMO4-204ENST00000495705 GCP02774 474 aa27.69■■■□□ 2.02
LMO4-204ENST00000495705 FNBP4Q8N3X1 1017 aaPredicted RBP27.69■■■□□ 2.02
LMO4-204ENST00000495705 CCDC7Q96M83 1385 aa27.69■■■□□ 2.02
LMO4-204ENST00000495705 NSD3Q9BZ95 1437 aa27.68■■■□□ 2.02
LMO4-204ENST00000495705 SLIT2O94813 1529 aa27.68■■■□□ 2.02
LMO4-204ENST00000495705 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.68■■■□□ 2.02
LMO4-204ENST00000495705 OVOS2A0A0J9YW53 1432 aa27.67■■■□□ 2.02
LMO4-204ENST00000495705 OVOS2Q6IE36 1432 aa27.67■■■□□ 2.02
LMO4-204ENST00000495705 KCNH5Q8NCM2 988 aa27.67■■■□□ 2.02
LMO4-204ENST00000495705 CPDO75976 1380 aa27.67■■■□□ 2.02
LMO4-204ENST00000495705 KIAA0232Q92628 1395 aa27.67■■■□□ 2.02
LMO4-204ENST00000495705 PRDM11Q9NQV5 511 aa27.66■■■□□ 2.02
LMO4-204ENST00000495705 CARD14Q9BXL6 1004 aa27.65■■■□□ 2.02
LMO4-204ENST00000495705 WASHC2AQ641Q2 1341 aa27.65■■■□□ 2.02
LMO4-204ENST00000495705 ZC3H6P61129 1189 aaKnown RBP27.64■■■□□ 2.02
LMO4-204ENST00000495705 ZRANB1Q9UGI0 708 aa27.64■■■□□ 2.02
LMO4-204ENST00000495705 USP21Q9UK80 565 aa27.64■■■□□ 2.02
LMO4-204ENST00000495705 NFAT5O94916 1531 aa27.63■■■□□ 2.01
LMO4-204ENST00000495705 FAM83GA6ND36 823 aa27.63■■■□□ 2.01
LMO4-204ENST00000495705 PANK3Q9H999 370 aa27.63■■■□□ 2.01
LMO4-204ENST00000495705 BCL9LQ86UU0 1499 aa27.63■■■□□ 2.01
LMO4-204ENST00000495705 COG3Q96JB2 828 aa27.62■■■□□ 2.01
LMO4-204ENST00000495705 CGNL1Q0VF96 1302 aa27.61■■■□□ 2.01
LMO4-204ENST00000495705 NRAPQ86VF7 1730 aa27.61■■■□□ 2.01
LMO4-204ENST00000495705 FYB1O15117 783 aa27.6■■■□□ 2.01
LMO4-204ENST00000495705 POTEAQ6S8J7 498 aa27.59■■■□□ 2.01
LMO4-204ENST00000495705 UNC5CLQ8IV45 518 aa27.59■■■□□ 2.01
LMO4-204ENST00000495705 LMO7Q8WWI1 1683 aa27.59■■■□□ 2.01
LMO4-204ENST00000495705 TRPC5Q9UL62 973 aaPredicted RBP27.58■■■□□ 2.01
LMO4-204ENST00000495705 ATRNO75882 1429 aa27.58■■■□□ 2
LMO4-204ENST00000495705 CHRNA2Q15822 529 aa27.57■■■□□ 2
LMO4-204ENST00000495705 GGNBP2Q9H3C7 697 aa27.57■■■□□ 2
LMO4-204ENST00000495705 BTG4Q9NY30 223 aa27.57■■■□□ 2
LMO4-204ENST00000495705 ANKRD26Q9UPS8 1709 aa27.57■■■□□ 2
LMO4-204ENST00000495705 SOX12O15370 315 aa27.56■■■□□ 2
LMO4-204ENST00000495705 ABCC6O95255 1503 aa27.56■■■□□ 2
LMO4-204ENST00000495705 LTN1O94822 1766 aa27.55■■■□□ 2
LMO4-204ENST00000495705 QTRT2Q9H974 415 aaKnown RBP27.55■■■□□ 2
LMO4-204ENST00000495705 AATKQ6ZMQ8 1374 aa27.55■■■□□ 2
LMO4-204ENST00000495705 ARHGEF25Q86VW2 580 aa27.54■■■□□ 2
LMO4-204ENST00000495705 COL18A1P39060 1754 aa27.53■■■□□ 2
LMO4-204ENST00000495705 NSD2O96028 1365 aa27.53■■■□□ 2
LMO4-204ENST00000495705 KNSTRNQ9Y448 316 aa27.53■■■□□ 2
LMO4-204ENST00000495705 ZBTB7CA1YPR0 619 aa27.52■■■□□ 2
LMO4-204ENST00000495705 CAMTA1Q9Y6Y1 1673 aa27.52■■■□□ 2
LMO4-204ENST00000495705 RXRBP28702 533 aa27.5■■□□□ 1.99
LMO4-204ENST00000495705 RBM6P78332 1123 aaKnown RBP27.5■■□□□ 1.99
LMO4-204ENST00000495705 VPS72Q15906 364 aa27.5■■□□□ 1.99
LMO4-204ENST00000495705 COL5A2P05997 1499 aaPredicted RBP27.47■■□□□ 1.99
LMO4-204ENST00000495705 CDK12Q9NYV4 1490 aaPredicted RBP27.46■■□□□ 1.99
LMO4-204ENST00000495705 RGPD5Q99666 1765 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms