RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 NUTM2GQ5VZR2 741 aa27.09■■□□□ 1.93
HDAC4-212ENST00000495497 ZNF692Q9BU19 519 aaPredicted RBP27.09■■□□□ 1.93
HDAC4-212ENST00000495497 ARHGEF10O15013 1369 aa27.08■■□□□ 1.93
HDAC4-212ENST00000495497 KTN1Q86UP2 1357 aaKnown RBP27.08■■□□□ 1.93
HDAC4-212ENST00000495497 COL22A1Q8NFW1 1626 aaPredicted RBP27.06■■□□□ 1.92
HDAC4-212ENST00000495497 MEX3CQ5U5Q3 659 aaKnown RBP27.06■■□□□ 1.92
HDAC4-212ENST00000495497 HDGFL2Q7Z4V5 671 aaPredicted RBP27.06■■□□□ 1.92
HDAC4-212ENST00000495497 ALS2Q96Q42 1657 aa27.05■■□□□ 1.92
HDAC4-212ENST00000495497 ADAMTS2O95450 1211 aa27.05■■□□□ 1.92
HDAC4-212ENST00000495497 ABTB2Q8N961 1025 aa27.05■■□□□ 1.92
HDAC4-212ENST00000495497 TERF2IPQ9NYB0 399 aa27.05■■□□□ 1.92
HDAC4-212ENST00000495497 A0A1W2PP64 1363 aa27.05■■□□□ 1.92
HDAC4-212ENST00000495497 SSH2Q76I76 1423 aa27.05■■□□□ 1.92
HDAC4-212ENST00000495497 TTC21BQ7Z4L5 1316 aa27.04■■□□□ 1.92
HDAC4-212ENST00000495497 NINLQ9Y2I6 1382 aa27.03■■□□□ 1.92
HDAC4-212ENST00000495497 AKAP12Q02952 1782 aa27.02■■□□□ 1.92
HDAC4-212ENST00000495497 ZEB1P37275 1124 aaPredicted RBP27.02■■□□□ 1.92
HDAC4-212ENST00000495497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.02■■□□□ 1.92
HDAC4-212ENST00000495497 BRD4O60885 1362 aaPredicted RBP27.01■■□□□ 1.91
HDAC4-212ENST00000495497 HAP1P54257 671 aaPredicted RBP27■■□□□ 1.91
HDAC4-212ENST00000495497 PHF23Q9BUL5 403 aaPredicted RBP26.99■■□□□ 1.91
HDAC4-212ENST00000495497 C8orf37Q96NL8 207 aa26.98■■□□□ 1.91
HDAC4-212ENST00000495497 ANKRD36BQ8N2N9 1353 aa26.97■■□□□ 1.91
HDAC4-212ENST00000495497 KIF7Q2M1P5 1343 aa26.97■■□□□ 1.91
HDAC4-212ENST00000495497 NLRP6P59044 892 aa26.97■■□□□ 1.91
HDAC4-212ENST00000495497 ZRANB1Q9UGI0 708 aa26.97■■□□□ 1.91
HDAC4-212ENST00000495497 MON2Q7Z3U7 1717 aa26.96■■□□□ 1.91
HDAC4-212ENST00000495497 MYOM1P52179 1685 aa26.96■■□□□ 1.91
HDAC4-212ENST00000495497 NRKQ7Z2Y5 1582 aa26.96■■□□□ 1.91
HDAC4-212ENST00000495497 TTC21AQ8NDW8 1320 aa26.95■■□□□ 1.91
HDAC4-212ENST00000495497 NLRP13Q86W25 1043 aa26.95■■□□□ 1.9
HDAC4-212ENST00000495497 NME9Q86XW9 330 aa26.95■■□□□ 1.9
HDAC4-212ENST00000495497 RGS17Q9UGC6 210 aaPredicted RBP26.95■■□□□ 1.9
HDAC4-212ENST00000495497 EDC4Q6P2E9 1401 aaKnown RBP26.94■■□□□ 1.9
HDAC4-212ENST00000495497 NGLY1Q96IV0 654 aa26.93■■□□□ 1.9
HDAC4-212ENST00000495497 PIK3C2AO00443 1686 aa26.92■■□□□ 1.9
HDAC4-212ENST00000495497 CARD14Q9BXL6 1004 aa26.92■■□□□ 1.9
HDAC4-212ENST00000495497 USP19O94966 1318 aa26.91■■□□□ 1.9
HDAC4-212ENST00000495497 ABCA3Q99758 1704 aa26.91■■□□□ 1.9
HDAC4-212ENST00000495497 AFF2P51816 1311 aa26.9■■□□□ 1.9
HDAC4-212ENST00000495497 CRYBG1Q9Y4K1 1723 aa26.89■■□□□ 1.9
HDAC4-212ENST00000495497 WASHC2AQ641Q2 1341 aa26.89■■□□□ 1.89
HDAC4-212ENST00000495497 ZC3H6P61129 1189 aaKnown RBP26.88■■□□□ 1.89
HDAC4-212ENST00000495497 PANK3Q9H999 370 aa26.88■■□□□ 1.89
HDAC4-212ENST00000495497 CCDC7Q96M83 1385 aa26.87■■□□□ 1.89
HDAC4-212ENST00000495497 FAM83GA6ND36 823 aa26.87■■□□□ 1.89
HDAC4-212ENST00000495497 GCP02774 474 aa26.87■■□□□ 1.89
HDAC4-212ENST00000495497 SOX12O15370 315 aa26.86■■□□□ 1.89
HDAC4-212ENST00000495497 NSD3Q9BZ95 1437 aa26.86■■□□□ 1.89
HDAC4-212ENST00000495497 PHRF1Q9P1Y6 1649 aaKnown RBP26.86■■□□□ 1.89
HDAC4-212ENST00000495497 USP31Q70CQ4 1352 aa26.85■■□□□ 1.89
HDAC4-212ENST00000495497 POTEAQ6S8J7 498 aa26.84■■□□□ 1.89
HDAC4-212ENST00000495497 KIAA0232Q92628 1395 aa26.84■■□□□ 1.89
HDAC4-212ENST00000495497 CHRNA2Q15822 529 aa26.83■■□□□ 1.89
HDAC4-212ENST00000495497 FNBP4Q8N3X1 1017 aaPredicted RBP26.83■■□□□ 1.89
HDAC4-212ENST00000495497 GGNBP2Q9H3C7 697 aa26.83■■□□□ 1.89
HDAC4-212ENST00000495497 SLIT3O75094 1523 aa26.82■■□□□ 1.88
HDAC4-212ENST00000495497 ZBTB7CA1YPR0 619 aa26.82■■□□□ 1.88
HDAC4-212ENST00000495497 FYB1O15117 783 aa26.82■■□□□ 1.88
HDAC4-212ENST00000495497 PRDM11Q9NQV5 511 aa26.82■■□□□ 1.88
HDAC4-212ENST00000495497 USP21Q9UK80 565 aa26.82■■□□□ 1.88
HDAC4-212ENST00000495497 MARF1Q9Y4F3 1742 aaKnown RBP26.82■■□□□ 1.88
HDAC4-212ENST00000495497 ZNF772Q68DY9 489 aaPredicted RBP26.81■■□□□ 1.88
HDAC4-212ENST00000495497 COG3Q96JB2 828 aa26.79■■□□□ 1.88
HDAC4-212ENST00000495497 OVOS2A0A0J9YW53 1432 aa26.79■■□□□ 1.88
HDAC4-212ENST00000495497 OVOS2Q6IE36 1432 aa26.79■■□□□ 1.88
HDAC4-212ENST00000495497 KCNH5Q8NCM2 988 aa26.78■■□□□ 1.88
HDAC4-212ENST00000495497 SLIT2O94813 1529 aa26.78■■□□□ 1.88
HDAC4-212ENST00000495497 BCL9LQ86UU0 1499 aa26.77■■□□□ 1.88
HDAC4-212ENST00000495497 BTG4Q9NY30 223 aa26.77■■□□□ 1.88
HDAC4-212ENST00000495497 QTRT2Q9H974 415 aaKnown RBP26.76■■□□□ 1.87
HDAC4-212ENST00000495497 CPDO75976 1380 aa26.75■■□□□ 1.87
HDAC4-212ENST00000495497 FBLN1P23142 703 aa26.75■■□□□ 1.87
HDAC4-212ENST00000495497 UNC5CLQ8IV45 518 aa26.75■■□□□ 1.87
HDAC4-212ENST00000495497 USP54Q70EL1 1684 aa26.73■■□□□ 1.87
HDAC4-212ENST00000495497 CGNL1Q0VF96 1302 aa26.73■■□□□ 1.87
HDAC4-212ENST00000495497 ARHGEF25Q86VW2 580 aa26.73■■□□□ 1.87
HDAC4-212ENST00000495497 NFAT5O94916 1531 aa26.73■■□□□ 1.87
HDAC4-212ENST00000495497 COL14A1Q05707 1796 aaKnown RBP26.72■■□□□ 1.87
HDAC4-212ENST00000495497 PLCH1Q4KWH8 1693 aa26.72■■□□□ 1.87
HDAC4-212ENST00000495497 ILDR2Q71H61 639 aa26.71■■□□□ 1.87
HDAC4-212ENST00000495497 TRPC5Q9UL62 973 aaPredicted RBP26.7■■□□□ 1.86
HDAC4-212ENST00000495497 KNSTRNQ9Y448 316 aa26.7■■□□□ 1.86
HDAC4-212ENST00000495497 KIF20BQ96Q89 1820 aa26.69■■□□□ 1.86
HDAC4-212ENST00000495497 ATRNO75882 1429 aa26.68■■□□□ 1.86
HDAC4-212ENST00000495497 STRN4Q9NRL3 753 aa26.68■■□□□ 1.86
HDAC4-212ENST00000495497 AXIN2Q9Y2T1 843 aa26.68■■□□□ 1.86
HDAC4-212ENST00000495497 PER1O15534 1290 aaPredicted RBP26.67■■□□□ 1.86
HDAC4-212ENST00000495497 AATKQ6ZMQ8 1374 aa26.67■■□□□ 1.86
HDAC4-212ENST00000495497 CAMTA1Q9Y6Y1 1673 aa26.66■■□□□ 1.86
HDAC4-212ENST00000495497 RXRBP28702 533 aa26.65■■□□□ 1.86
HDAC4-212ENST00000495497 VPS72Q15906 364 aa26.65■■□□□ 1.86
HDAC4-212ENST00000495497 CCDC9Q9Y3X0 531 aaKnown RBP26.65■■□□□ 1.86
HDAC4-212ENST00000495497 NWD2Q9ULI1 1742 aa26.65■■□□□ 1.86
HDAC4-212ENST00000495497 EVA1CP58658 441 aa26.64■■□□□ 1.86
HDAC4-212ENST00000495497 RRS1Q15050 365 aaKnown RBP26.64■■□□□ 1.86
HDAC4-212ENST00000495497 LMO7Q8WWI1 1683 aa26.63■■□□□ 1.85
HDAC4-212ENST00000495497 NRAPQ86VF7 1730 aa26.63■■□□□ 1.85
HDAC4-212ENST00000495497 RBM6P78332 1123 aaKnown RBP26.63■■□□□ 1.85
HDAC4-212ENST00000495497 AMER1Q5JTC6 1135 aaPredicted RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms