RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 POLR3AO14802 1390 aaPredicted RBP26.18■■□□□ 1.78
YIPF4-204ENST00000495355 PHRF1Q9P1Y6 1649 aaKnown RBP26.17■■□□□ 1.78
YIPF4-204ENST00000495355 L3MBTL2Q969R5 705 aa26.17■■□□□ 1.78
YIPF4-204ENST00000495355 SIN3AQ96ST3 1273 aa26.16■■□□□ 1.78
YIPF4-204ENST00000495355 QRICH2Q9H0J4 1663 aa26.15■■□□□ 1.78
YIPF4-204ENST00000495355 TRPM1Q7Z4N2 1603 aa26.14■■□□□ 1.78
YIPF4-204ENST00000495355 ONECUT3O60422 494 aaPredicted RBP26.14■■□□□ 1.78
YIPF4-204ENST00000495355 SEPT12Q8IYM1 358 aa26.13■■□□□ 1.77
YIPF4-204ENST00000495355 ACEP12821 1306 aa26.13■■□□□ 1.77
YIPF4-204ENST00000495355 PAK3O75914 559 aaPredicted RBP26.12■■□□□ 1.77
YIPF4-204ENST00000495355 BTG4Q9NY30 223 aa26.12■■□□□ 1.77
YIPF4-204ENST00000495355 PLEKHG3A1L390 1219 aa26.11■■□□□ 1.77
YIPF4-204ENST00000495355 CCDC61Q9Y6R9 512 aa26.11■■□□□ 1.77
YIPF4-204ENST00000495355 CENPJQ9HC77 1338 aaPredicted RBP26.11■■□□□ 1.77
YIPF4-204ENST00000495355 NBPF8Q3BBV2 869 aa26.09■■□□□ 1.77
YIPF4-204ENST00000495355 CCDC9Q9Y3X0 531 aaKnown RBP26.08■■□□□ 1.77
YIPF4-204ENST00000495355 NRKQ7Z2Y5 1582 aa26.07■■□□□ 1.76
YIPF4-204ENST00000495355 KIAA0232Q92628 1395 aa26.07■■□□□ 1.76
YIPF4-204ENST00000495355 PPIP5K1Q6PFW1 1433 aa26.06■■□□□ 1.76
YIPF4-204ENST00000495355 NUTM2GQ5VZR2 741 aa26.06■■□□□ 1.76
YIPF4-204ENST00000495355 CABP2Q9NPB3 220 aa26.06■■□□□ 1.76
YIPF4-204ENST00000495355 BLMP54132 1417 aaPredicted RBP26.05■■□□□ 1.76
YIPF4-204ENST00000495355 CCDC125Q86Z20 511 aa26.05■■□□□ 1.76
YIPF4-204ENST00000495355 THSD7AQ9UPZ6 1657 aa26.05■■□□□ 1.76
YIPF4-204ENST00000495355 FAM98CQ17RN3 349 aaKnown RBP26.03■■□□□ 1.76
YIPF4-204ENST00000495355 PRDM11Q9NQV5 511 aa26.03■■□□□ 1.76
YIPF4-204ENST00000495355 SPATA31A5Q5VU36 1347 aa26.03■■□□□ 1.76
YIPF4-204ENST00000495355 SPATA31A7Q8IWB4 1347 aa26.03■■□□□ 1.76
YIPF4-204ENST00000495355 SRCAPQ6ZRS2 3230 aa26.03■■□□□ 1.76
YIPF4-204ENST00000495355 SRPK2P78362 688 aaKnown RBP26.02■■□□□ 1.76
YIPF4-204ENST00000495355 CHRNA2Q15822 529 aa26.02■■□□□ 1.76
YIPF4-204ENST00000495355 USP19O94966 1318 aa26.01■■□□□ 1.75
YIPF4-204ENST00000495355 NEUROD1Q13562 356 aa26.01■■□□□ 1.75
YIPF4-204ENST00000495355 KRT27Q7Z3Y8 459 aa26.01■■□□□ 1.75
YIPF4-204ENST00000495355 LMO7Q8WWI1 1683 aa26■■□□□ 1.75
YIPF4-204ENST00000495355 ZC3H6P61129 1189 aaKnown RBP25.99■■□□□ 1.75
YIPF4-204ENST00000495355 DEFB132Q7Z7B7 95 aa25.98■■□□□ 1.75
YIPF4-204ENST00000495355 CAMTA1Q9Y6Y1 1673 aa25.97■■□□□ 1.75
YIPF4-204ENST00000495355 USP6P35125 1406 aa25.97■■□□□ 1.75
YIPF4-204ENST00000495355 SSH2Q76I76 1423 aa25.97■■□□□ 1.75
YIPF4-204ENST00000495355 ABTB2Q8N961 1025 aa25.96■■□□□ 1.75
YIPF4-204ENST00000495355 ROCK2O75116 1388 aaKnown RBP25.95■■□□□ 1.75
YIPF4-204ENST00000495355 SPATA31A1Q5TZJ5 1347 aa25.95■■□□□ 1.75
YIPF4-204ENST00000495355 CABP1Q9NZU7 370 aa25.95■■□□□ 1.74
YIPF4-204ENST00000495355 CPDO75976 1380 aa25.95■■□□□ 1.74
YIPF4-204ENST00000495355 PIK3C2AO00443 1686 aa25.93■■□□□ 1.74
YIPF4-204ENST00000495355 A0A0G2JS52 829 aa25.92■■□□□ 1.74
YIPF4-204ENST00000495355 MYT1Q01538 1121 aa25.92■■□□□ 1.74
YIPF4-204ENST00000495355 FAM182BQ5T319 152 aa25.92■■□□□ 1.74
YIPF4-204ENST00000495355 SLIT3O75094 1523 aa25.92■■□□□ 1.74
YIPF4-204ENST00000495355 BRD4O60885 1362 aaPredicted RBP25.91■■□□□ 1.74
YIPF4-204ENST00000495355 AKAP12Q02952 1782 aa25.9■■□□□ 1.74
YIPF4-204ENST00000495355 STRN4Q9NRL3 753 aa25.9■■□□□ 1.74
YIPF4-204ENST00000495355 ZRANB1Q9UGI0 708 aa25.9■■□□□ 1.74
YIPF4-204ENST00000495355 GCP02774 474 aa25.89■■□□□ 1.74
YIPF4-204ENST00000495355 EVC2Q86UK5 1308 aa25.88■■□□□ 1.73
YIPF4-204ENST00000495355 TNS1Q9HBL0 1735 aaKnown RBP25.88■■□□□ 1.73
YIPF4-204ENST00000495355 MSH5O43196 834 aa25.88■■□□□ 1.73
YIPF4-204ENST00000495355 NLRP13Q86W25 1043 aa25.87■■□□□ 1.73
YIPF4-204ENST00000495355 RGPD1P0DJD0 1748 aa25.87■■□□□ 1.73
YIPF4-204ENST00000495355 LARP1Q6PKG0 1096 aaKnown RBP25.86■■□□□ 1.73
YIPF4-204ENST00000495355 COL5A2P05997 1499 aaPredicted RBP25.85■■□□□ 1.73
YIPF4-204ENST00000495355 COL18A1P39060 1754 aa25.85■■□□□ 1.73
YIPF4-204ENST00000495355 CPSF1Q10570 1443 aaKnown RBP25.83■■□□□ 1.73
YIPF4-204ENST00000495355 SBNO2Q9Y2G9 1366 aa25.82■■□□□ 1.72
YIPF4-204ENST00000495355 SF3B2Q13435 895 aaKnown RBP25.82■■□□□ 1.72
YIPF4-204ENST00000495355 USP35Q9P2H5 1018 aa25.82■■□□□ 1.72
YIPF4-204ENST00000495355 NLRP6P59044 892 aa25.81■■□□□ 1.72
YIPF4-204ENST00000495355 BARGINQ6ZT62 677 aa25.81■■□□□ 1.72
YIPF4-204ENST00000495355 MON2Q7Z3U7 1717 aa25.8■■□□□ 1.72
YIPF4-204ENST00000495355 TTC21BQ7Z4L5 1316 aa25.8■■□□□ 1.72
YIPF4-204ENST00000495355 DISP2A7MBM2 1401 aa25.8■■□□□ 1.72
YIPF4-204ENST00000495355 CD163L1Q9NR16 1453 aa25.79■■□□□ 1.72
YIPF4-204ENST00000495355 EVA1CP58658 441 aa25.78■■□□□ 1.72
YIPF4-204ENST00000495355 AATKQ6ZMQ8 1374 aa25.78■■□□□ 1.72
YIPF4-204ENST00000495355 PARP4Q9UKK3 1724 aaKnown RBP25.77■■□□□ 1.72
YIPF4-204ENST00000495355 BAG6P46379 1132 aa25.76■■□□□ 1.71
YIPF4-204ENST00000495355 EN1Q05925 392 aaPredicted RBP25.76■■□□□ 1.71
YIPF4-204ENST00000495355 TCP11L2Q8N4U5 519 aa25.76■■□□□ 1.71
YIPF4-204ENST00000495355 CARD11Q9BXL7 1154 aa25.76■■□□□ 1.71
YIPF4-204ENST00000495355 NFAT5O94916 1531 aa25.76■■□□□ 1.71
YIPF4-204ENST00000495355 CRB1P82279 1406 aa25.74■■□□□ 1.71
YIPF4-204ENST00000495355 TONSLQ96HA7 1378 aa25.74■■□□□ 1.71
YIPF4-204ENST00000495355 ZNF692Q9BU19 519 aaPredicted RBP25.74■■□□□ 1.71
YIPF4-204ENST00000495355 AXIN2Q9Y2T1 843 aa25.74■■□□□ 1.71
YIPF4-204ENST00000495355 RGPD5Q99666 1765 aa25.73■■□□□ 1.71
YIPF4-204ENST00000495355 USP54Q70EL1 1684 aa25.73■■□□□ 1.71
YIPF4-204ENST00000495355 ZBTB7CA1YPR0 619 aa25.72■■□□□ 1.71
YIPF4-204ENST00000495355 LRRC37A3O60309 1634 aa25.72■■□□□ 1.71
YIPF4-204ENST00000495355 WNK3Q9BYP7 1800 aa25.72■■□□□ 1.71
YIPF4-204ENST00000495355 KTN1Q86UP2 1357 aaKnown RBP25.71■■□□□ 1.71
YIPF4-204ENST00000495355 TTC21AQ8NDW8 1320 aa25.71■■□□□ 1.71
YIPF4-204ENST00000495355 TRIM37O94972 964 aa25.71■■□□□ 1.71
YIPF4-204ENST00000495355 ARHGEF25Q86VW2 580 aa25.71■■□□□ 1.71
YIPF4-204ENST00000495355 THRAP3Q9Y2W1 955 aaKnown RBP25.71■■□□□ 1.71
YIPF4-204ENST00000495355 PEAK1Q9H792 1746 aa25.71■■□□□ 1.71
YIPF4-204ENST00000495355 FAM196AQ6ZSG2 479 aa25.7■■□□□ 1.7
YIPF4-204ENST00000495355 LRP5O75197 1615 aa25.68■■□□□ 1.7
YIPF4-204ENST00000495355 EZH2Q15910 746 aaKnown RBP25.68■■□□□ 1.7
YIPF4-204ENST00000495355 PSDA5PKW4 1024 aaPredicted RBP25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms