RNA–Protein interactions for RNA: ENST00000495311.1

POLR2B-210, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-210ENST00000495311 USP21Q9UK80 565 aa15.66■□□□□ 0.1
POLR2B-210ENST00000495311 SLIT2O94813 1529 aa15.66■□□□□ 0.1
POLR2B-210ENST00000495311 NINLQ9Y2I6 1382 aa15.65■□□□□ 0.1
POLR2B-210ENST00000495311 ESCO1Q5FWF5 840 aa15.65■□□□□ 0.1
POLR2B-210ENST00000495311 PHF8Q9UPP1 1060 aa15.65■□□□□ 0.1
POLR2B-210ENST00000495311 POLR3AO14802 1390 aaPredicted RBP15.64■□□□□ 0.09
POLR2B-210ENST00000495311 NUTM2FA1L443 756 aa15.64■□□□□ 0.09
POLR2B-210ENST00000495311 TRPC5Q9UL62 973 aaPredicted RBP15.64■□□□□ 0.09
POLR2B-210ENST00000495311 NWD2Q9ULI1 1742 aa15.64■□□□□ 0.09
POLR2B-210ENST00000495311 NRAPQ86VF7 1730 aa15.63■□□□□ 0.09
POLR2B-210ENST00000495311 CABP1Q9NZU7 370 aa15.63■□□□□ 0.09
POLR2B-210ENST00000495311 XPCQ01831 940 aaPredicted RBP15.62■□□□□ 0.09
POLR2B-210ENST00000495311 ZNF692Q9BU19 519 aaPredicted RBP15.62■□□□□ 0.09
POLR2B-210ENST00000495311 TRPM3Q9HCF6 1732 aaPredicted RBP15.62■□□□□ 0.09
POLR2B-210ENST00000495311 CRYBG1Q9Y4K1 1723 aa15.62■□□□□ 0.09
POLR2B-210ENST00000495311 NPHP3Q7Z494 1330 aa15.61■□□□□ 0.09
POLR2B-210ENST00000495311 BRD4O60885 1362 aaPredicted RBP15.61■□□□□ 0.09
POLR2B-210ENST00000495311 PPIP5K1Q6PFW1 1433 aa15.6■□□□□ 0.09
POLR2B-210ENST00000495311 SLC12A5Q9H2X9 1139 aa15.6■□□□□ 0.09
POLR2B-210ENST00000495311 KIF7Q2M1P5 1343 aa15.6■□□□□ 0.09
POLR2B-210ENST00000495311 CPSF1Q10570 1443 aaKnown RBP15.6■□□□□ 0.09
POLR2B-210ENST00000495311 FOXO3O43524 673 aa15.59■□□□□ 0.09
POLR2B-210ENST00000495311 PMFBP1Q8TBY8 1022 aa15.59■□□□□ 0.09
POLR2B-210ENST00000495311 ACEP12821 1306 aa15.59■□□□□ 0.09
POLR2B-210ENST00000495311 ALS2Q96Q42 1657 aa15.58■□□□□ 0.08
POLR2B-210ENST00000495311 WASHC2AQ641Q2 1341 aa15.58■□□□□ 0.08
POLR2B-210ENST00000495311 CCDC7Q96M83 1385 aa15.58■□□□□ 0.08
POLR2B-210ENST00000495311 TOPAZ1Q8N9V7 1692 aa15.57■□□□□ 0.08
POLR2B-210ENST00000495311 PSME1Q06323 249 aa15.57■□□□□ 0.08
POLR2B-210ENST00000495311 NGDNQ8NEJ9 315 aaKnown RBP15.57■□□□□ 0.08
POLR2B-210ENST00000495311 TERF2IPQ9NYB0 399 aa15.57■□□□□ 0.08
POLR2B-210ENST00000495311 LRP5O75197 1615 aa15.57■□□□□ 0.08
POLR2B-210ENST00000495311 KRT28Q7Z3Y7 464 aa15.56■□□□□ 0.08
POLR2B-210ENST00000495311 GJD4Q96KN9 370 aaPredicted RBP15.56■□□□□ 0.08
POLR2B-210ENST00000495311 SPATA31A3Q5VYP0 1347 aa15.56■□□□□ 0.08
POLR2B-210ENST00000495311 SSH2Q76I76 1423 aa15.56■□□□□ 0.08
POLR2B-210ENST00000495311 CD163L1Q9NR16 1453 aa15.56■□□□□ 0.08
POLR2B-210ENST00000495311 ITSN1Q15811 1721 aa15.55■□□□□ 0.08
POLR2B-210ENST00000495311 SBNO1A3KN83 1393 aa15.55■□□□□ 0.08
POLR2B-210ENST00000495311 ANKRD36BQ8N2N9 1353 aa15.55■□□□□ 0.08
POLR2B-210ENST00000495311 TMC1Q8TDI8 760 aa15.55■□□□□ 0.08
POLR2B-210ENST00000495311 TNS3Q68CZ2 1445 aa15.54■□□□□ 0.08
POLR2B-210ENST00000495311 HDGFL2Q7Z4V5 671 aaPredicted RBP15.54■□□□□ 0.08
POLR2B-210ENST00000495311 USP6P35125 1406 aa15.52■□□□□ 0.08
POLR2B-210ENST00000495311 BLMP54132 1417 aaPredicted RBP15.52■□□□□ 0.08
POLR2B-210ENST00000495311 TNS1Q9HBL0 1735 aaKnown RBP15.52■□□□□ 0.08
POLR2B-210ENST00000495311 UNC5CLQ8IV45 518 aa15.52■□□□□ 0.08
POLR2B-210ENST00000495311 A0A1W2PP64 1363 aa15.51■□□□□ 0.07
POLR2B-210ENST00000495311 ZNF316A6NFI3 1004 aaPredicted RBP15.51■□□□□ 0.07
POLR2B-210ENST00000495311 KTN1Q86UP2 1357 aaKnown RBP15.5■□□□□ 0.07
POLR2B-210ENST00000495311 TTC21AQ8NDW8 1320 aa15.5■□□□□ 0.07
POLR2B-210ENST00000495311 CARD14Q9BXL6 1004 aa15.5■□□□□ 0.07
POLR2B-210ENST00000495311 THSD7AQ9UPZ6 1657 aa15.5■□□□□ 0.07
POLR2B-210ENST00000495311 EDC4Q6P2E9 1401 aaKnown RBP15.5■□□□□ 0.07
POLR2B-210ENST00000495311 TTC21BQ7Z4L5 1316 aa15.49■□□□□ 0.07
POLR2B-210ENST00000495311 PER1O15534 1290 aaPredicted RBP15.49■□□□□ 0.07
POLR2B-210ENST00000495311 PANK3Q9H999 370 aa15.49■□□□□ 0.07
POLR2B-210ENST00000495311 DEFB132Q7Z7B7 95 aa15.48■□□□□ 0.07
POLR2B-210ENST00000495311 CCDC125Q86Z20 511 aa15.48■□□□□ 0.07
POLR2B-210ENST00000495311 CABLES1Q8TDN4 633 aa15.48■□□□□ 0.07
POLR2B-210ENST00000495311 ZRANB1Q9UGI0 708 aa15.48■□□□□ 0.07
POLR2B-210ENST00000495311 COL14A1Q05707 1796 aaKnown RBP15.47■□□□□ 0.07
POLR2B-210ENST00000495311 ONECUT3O60422 494 aaPredicted RBP15.47■□□□□ 0.07
POLR2B-210ENST00000495311 RGPD1P0DJD0 1748 aa15.47■□□□□ 0.07
POLR2B-210ENST00000495311 POLR3GLQ9BT43 218 aa15.47■□□□□ 0.07
POLR2B-210ENST00000495311 MYOM1P52179 1685 aa15.47■□□□□ 0.07
POLR2B-210ENST00000495311 ARHGEF10O15013 1369 aa15.47■□□□□ 0.07
POLR2B-210ENST00000495311 USP31Q70CQ4 1352 aa15.46■□□□□ 0.07
POLR2B-210ENST00000495311 AKAP12Q02952 1782 aa15.45■□□□□ 0.06
POLR2B-210ENST00000495311 VPS72Q15906 364 aa15.45■□□□□ 0.06
POLR2B-210ENST00000495311 PHRF1Q9P1Y6 1649 aaKnown RBP15.44■□□□□ 0.06
POLR2B-210ENST00000495311 FYB1O15117 783 aa15.44■□□□□ 0.06
POLR2B-210ENST00000495311 SEPT12Q8IYM1 358 aa15.44■□□□□ 0.06
POLR2B-210ENST00000495311 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
POLR2B-210ENST00000495311 NLRP13Q86W25 1043 aa15.43■□□□□ 0.06
POLR2B-210ENST00000495311 ABTB2Q8N961 1025 aa15.43■□□□□ 0.06
POLR2B-210ENST00000495311 NPC1L1Q9UHC9 1359 aa15.43■□□□□ 0.06
POLR2B-210ENST00000495311 MON2Q7Z3U7 1717 aa15.43■□□□□ 0.06
POLR2B-210ENST00000495311 KNSTRNQ9Y448 316 aa15.42■□□□□ 0.06
POLR2B-210ENST00000495311 UTRNP46939 3433 aa15.42■□□□□ 0.06
POLR2B-210ENST00000495311 NSD3Q9BZ95 1437 aa15.42■□□□□ 0.06
POLR2B-210ENST00000495311 USP19O94966 1318 aa15.42■□□□□ 0.06
POLR2B-210ENST00000495311 CGNL1Q0VF96 1302 aa15.42■□□□□ 0.06
POLR2B-210ENST00000495311 NRKQ7Z2Y5 1582 aa15.41■□□□□ 0.06
POLR2B-210ENST00000495311 FAM83GA6ND36 823 aa15.41■□□□□ 0.06
POLR2B-210ENST00000495311 AMER1Q5JTC6 1135 aaPredicted RBP15.41■□□□□ 0.06
POLR2B-210ENST00000495311 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.41■□□□□ 0.06
POLR2B-210ENST00000495311 NLRP6P59044 892 aa15.4■□□□□ 0.06
POLR2B-210ENST00000495311 RREB1Q92766 1687 aa15.4■□□□□ 0.06
POLR2B-210ENST00000495311 NSD2O96028 1365 aa15.39■□□□□ 0.05
POLR2B-210ENST00000495311 DDX10Q13206 875 aaKnown RBP15.39■□□□□ 0.05
POLR2B-210ENST00000495311 NME9Q86XW9 330 aa15.39■□□□□ 0.05
POLR2B-210ENST00000495311 OVOS2A0A0J9YW53 1432 aa15.38■□□□□ 0.05
POLR2B-210ENST00000495311 OVOS2Q6IE36 1432 aa15.38■□□□□ 0.05
POLR2B-210ENST00000495311 DISP2A7MBM2 1401 aa15.37■□□□□ 0.05
POLR2B-210ENST00000495311 GCP02774 474 aa15.37■□□□□ 0.05
POLR2B-210ENST00000495311 LMOD2Q6P5Q4 547 aa15.37■□□□□ 0.05
POLR2B-210ENST00000495311 KCNH5Q8NCM2 988 aa15.37■□□□□ 0.05
POLR2B-210ENST00000495311 NUP188Q5SRE5 1749 aa15.37■□□□□ 0.05
POLR2B-210ENST00000495311 KRT27Q7Z3Y8 459 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms